| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is yqeL [H]
Identifier: 220932175
GI number: 220932175
Start: 1437623
End: 1437988
Strand: Reverse
Name: yqeL [H]
Synonym: Hore_13380
Alternate gene names: 220932175
Gene position: 1437988-1437623 (Counterclockwise)
Preceding gene: 220932176
Following gene: 220932174
Centisome position: 55.78
GC content: 39.34
Gene sequence:
>366_bases ATGAGTAATAATACTGAAAAGACTACTAAAGAGTTAGCTATACTGGCTGCTGAAGCAGCTGAAGATAAAAAAGCAAATGA TGTTCAGGTATTAGATGTCAAGGAGTTAACTATAATAGCCGATTATTTTGTGATATGCAGTGGTAATTCAGAACCACAGG TTAAGGCGATAGCGAGGTCAGTGGAAGATAAGCTTGGAGAAGAAGGCATACATCCCCAGAAAGTGGCGGGAAAAGATAAT GCCCGCTGGATATTGATGGATTATGCCGATGTTATTGTTCATATCTTTTTAGAAGAGGAAAGACAGTATTATGAGCTTGA GAGGTTATGGGCTGACGCCGAGCAAATATTGAGAAAGGGTGAATAA
Upstream 100 bases:
>100_bases CTGGAGATAATTATTGGCCATGATTATTTAAAAAGAATAGATTATAAAGAAGAAAAGAAAAAAATAGAAAAGAAAGAAGA TAAGGGAGTTGGTAAAAAGG
Downstream 100 bases:
>100_bases TTCAGTACTTACCGGTATAACTGCTACAACCTTTTTTGCTCTTTTAAGGTTTAAAATATATTATTCCTTGACATTTATAA AAAATATTATTATAATCTAT
Product: iojap-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 121; Mature: 120
Protein sequence:
>121_residues MSNNTEKTTKELAILAAEAAEDKKANDVQVLDVKELTIIADYFVICSGNSEPQVKAIARSVEDKLGEEGIHPQKVAGKDN ARWILMDYADVIVHIFLEEERQYYELERLWADAEQILRKGE
Sequences:
>Translated_121_residues MSNNTEKTTKELAILAAEAAEDKKANDVQVLDVKELTIIADYFVICSGNSEPQVKAIARSVEDKLGEEGIHPQKVAGKDN ARWILMDYADVIVHIFLEEERQYYELERLWADAEQILRKGE >Mature_120_residues SNNTEKTTKELAILAAEAAEDKKANDVQVLDVKELTIIADYFVICSGNSEPQVKAIARSVEDKLGEEGIHPQKVAGKDNA RWILMDYADVIVHIFLEEERQYYELERLWADAEQILRKGE
Specific function: Unknown
COG id: COG0799
COG function: function code S; Uncharacterized homolog of plant Iojap protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Iojap family [H]
Homologues:
Organism=Escherichia coli, GI87081768, Length=102, Percent_Identity=39.2156862745098, Blast_Score=79, Evalue=8e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004394 [H]
Pfam domain/function: PF02410 DUF143 [H]
EC number: NA
Molecular weight: Translated: 13736; Mature: 13604
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNNTEKTTKELAILAAEAAEDKKANDVQVLDVKELTIIADYFVICSGNSEPQVKAIARS CCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHEEEEEEEEECCCCCHHHHHHHHH VEDKLGEEGIHPQKVAGKDNARWILMDYADVIVHIFLEEERQYYELERLWADAEQILRKG HHHHHCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC E C >Mature Secondary Structure SNNTEKTTKELAILAAEAAEDKKANDVQVLDVKELTIIADYFVICSGNSEPQVKAIARS CCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHEEEEEEEEECCCCCHHHHHHHHH VEDKLGEEGIHPQKVAGKDNARWILMDYADVIVHIFLEEERQYYELERLWADAEQILRKG HHHHHCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC E C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]