| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220932163
Identifier: 220932163
GI number: 220932163
Start: 1425571
End: 1426659
Strand: Reverse
Name: 220932163
Synonym: Hore_13260
Alternate gene names: NA
Gene position: 1426659-1425571 (Counterclockwise)
Preceding gene: 220932164
Following gene: 220932162
Centisome position: 55.34
GC content: 39.76
Gene sequence:
>1089_bases ATGAAAAAAAGAGTAGGTTATGGATTGCTTTTTTTTCTTCTTGTTATTACGTTAGCTTCTTTAACGATTACCGCTAAAGA ACAAGAAGGAGTCTATTATTATCCTGAAACTTTAATGGATGCCAGGGATTTATATTTTAATGGTACTGAAGTCGGTATTT TAGCCCGGGCCTACAACGGAGATACATATTTTTTAGTATATGAACTAGGAAATCCTTATTTAACTGGGGTATATAATTTC CTGGCCACAAGTATTGAAGACATACAGAATGGAACTCTGCCTGAAGAAGAGGGGGTCTATTACCTGCCTGATGGGGTTAC TGATGTACGGGATATCCAAATTATAAATAGGGAAATATTAATTACCTCCAGAACCGATGGAGGGGATGTGGCTATGACCA TCTATCAGATGGGCCAGTCCTACCCCACTAGTTTTGTCCTTTATCAGGCCGAACCTATTGAAAAAATTCTTAATAATAAC CTGACACCAGAACATGGTCTATATTATATTCCAGATACGACTACTGATGTCAGGGATGTGGATATAATTGGTCAGGAGAT TATCTTAACCTGTCAGACTACAATCGGTGATGTTGCTATGATATTTTATGAAATGGGTGAATCTTATCCAACATCTTTTG CTATCTTCCAGGCTACTGCCCCTGAAAAAGTGGATAACCGGGAACTTCCCGTTGAAAAGGGAATGTACTATATCCCTGAT GGTGGTACAGATGTCAGGGCTGTTGATTTTGTCGGAAATGAGTTTGTTTTAACGGCTCCTACGGATCGCGGTGATGTTGC TATGATTTTCTACAATATGGGAGAGTCCTACCCGAATTCCTATGCCAGGTTTCAATCCACAGAACCCAGCAAAGTTGATA ACAGAGAGCTTCAGGGCGAACAGGGCCTTTATTTTATTCCAGATGGTTTAACTGATATTCGGGGTGTTATTATTGAGAAC AGTGACATTCTGTTTCTTTCTAAAGCCCGGAGTGGAATTATAATGACCCTGTTCCAGGGTGGGAATTCTTATCCTGTATC CTATGCATTTTTTAAACCTACCGAGCCCGATAAGTGCTTTGATAATTAG
Upstream 100 bases:
>100_bases TAGTACTGAGGGTGTAAAAGGGAATGATCTGTTAGACTTAATTTAATCACTTATTTACATTTGATTAAAGCAGATTAAGG AACTGGAAAGGAAGGATTTT
Downstream 100 bases:
>100_bases GTATCTGTTTTTAAGGCAGCTAAAGTCGTTTAGTCTTAAAACTTTTTACACCCTCATTTTTTTGCTGTTAGGCTTTTTTA TAAGTTTTAAAAATTAACTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 362; Mature: 362
Protein sequence:
>362_residues MKKRVGYGLLFFLLVITLASLTITAKEQEGVYYYPETLMDARDLYFNGTEVGILARAYNGDTYFLVYELGNPYLTGVYNF LATSIEDIQNGTLPEEEGVYYLPDGVTDVRDIQIINREILITSRTDGGDVAMTIYQMGQSYPTSFVLYQAEPIEKILNNN LTPEHGLYYIPDTTTDVRDVDIIGQEIILTCQTTIGDVAMIFYEMGESYPTSFAIFQATAPEKVDNRELPVEKGMYYIPD GGTDVRAVDFVGNEFVLTAPTDRGDVAMIFYNMGESYPNSYARFQSTEPSKVDNRELQGEQGLYFIPDGLTDIRGVIIEN SDILFLSKARSGIIMTLFQGGNSYPVSYAFFKPTEPDKCFDN
Sequences:
>Translated_362_residues MKKRVGYGLLFFLLVITLASLTITAKEQEGVYYYPETLMDARDLYFNGTEVGILARAYNGDTYFLVYELGNPYLTGVYNF LATSIEDIQNGTLPEEEGVYYLPDGVTDVRDIQIINREILITSRTDGGDVAMTIYQMGQSYPTSFVLYQAEPIEKILNNN LTPEHGLYYIPDTTTDVRDVDIIGQEIILTCQTTIGDVAMIFYEMGESYPTSFAIFQATAPEKVDNRELPVEKGMYYIPD GGTDVRAVDFVGNEFVLTAPTDRGDVAMIFYNMGESYPNSYARFQSTEPSKVDNRELQGEQGLYFIPDGLTDIRGVIIEN SDILFLSKARSGIIMTLFQGGNSYPVSYAFFKPTEPDKCFDN >Mature_362_residues MKKRVGYGLLFFLLVITLASLTITAKEQEGVYYYPETLMDARDLYFNGTEVGILARAYNGDTYFLVYELGNPYLTGVYNF LATSIEDIQNGTLPEEEGVYYLPDGVTDVRDIQIINREILITSRTDGGDVAMTIYQMGQSYPTSFVLYQAEPIEKILNNN LTPEHGLYYIPDTTTDVRDVDIIGQEIILTCQTTIGDVAMIFYEMGESYPTSFAIFQATAPEKVDNRELPVEKGMYYIPD GGTDVRAVDFVGNEFVLTAPTDRGDVAMIFYNMGESYPNSYARFQSTEPSKVDNRELQGEQGLYFIPDGLTDIRGVIIEN SDILFLSKARSGIIMTLFQGGNSYPVSYAFFKPTEPDKCFDN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40674; Mature: 40674
Theoretical pI: Translated: 3.98; Mature: 3.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKRVGYGLLFFLLVITLASLTITAKEQEGVYYYPETLMDARDLYFNGTEVGILARAYNG CCCCCCHHHHHHHHHHHHHHEEEEEECCCCEEECCHHHCCCHHEEECCCEEEEEEEEECC DTYFLVYELGNPYLTGVYNFLATSIEDIQNGTLPEEEGVYYLPDGVTDVRDIQIINREIL CEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCEEEEECEEEE ITSRTDGGDVAMTIYQMGQSYPTSFVLYQAEPIEKILNNNLTPEHGLYYIPDTTTDVRDV EEECCCCCCEEEEEECCCCCCCCEEEEEECCHHHHHHCCCCCCCCCEEECCCCCCCCEEH DIIGQEIILTCQTTIGDVAMIFYEMGESYPTSFAIFQATAPEKVDNRELPVEKGMYYIPD EECCCEEEEEEECCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCHHHCEEECCC GGTDVRAVDFVGNEFVLTAPTDRGDVAMIFYNMGESYPNSYARFQSTEPSKVDNRELQGE CCCCEEEEEECCCEEEEECCCCCCCEEEEEEECCCCCCCHHHHCCCCCCCCCCCCCCCCC QGLYFIPDGLTDIRGVIIENSDILFLSKARSGIIMTLFQGGNSYPVSYAFFKPTEPDKCF CCEEECCCCCCCCEEEEEECCCEEEEECCCCCEEEEEEECCCCCCEEEEEECCCCCCCCC DN CC >Mature Secondary Structure MKKRVGYGLLFFLLVITLASLTITAKEQEGVYYYPETLMDARDLYFNGTEVGILARAYNG CCCCCCHHHHHHHHHHHHHHEEEEEECCCCEEECCHHHCCCHHEEECCCEEEEEEEEECC DTYFLVYELGNPYLTGVYNFLATSIEDIQNGTLPEEEGVYYLPDGVTDVRDIQIINREIL CEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCEEEEECEEEE ITSRTDGGDVAMTIYQMGQSYPTSFVLYQAEPIEKILNNNLTPEHGLYYIPDTTTDVRDV EEECCCCCCEEEEEECCCCCCCCEEEEEECCHHHHHHCCCCCCCCCEEECCCCCCCCEEH DIIGQEIILTCQTTIGDVAMIFYEMGESYPTSFAIFQATAPEKVDNRELPVEKGMYYIPD EECCCEEEEEEECCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCHHHCEEECCC GGTDVRAVDFVGNEFVLTAPTDRGDVAMIFYNMGESYPNSYARFQSTEPSKVDNRELQGE CCCCEEEEEECCCEEEEECCCCCCCEEEEEEECCCCCCCHHHHCCCCCCCCCCCCCCCCC QGLYFIPDGLTDIRGVIIENSDILFLSKARSGIIMTLFQGGNSYPVSYAFFKPTEPDKCF CCEEECCCCCCCCEEEEEECCCEEEEECCCCCEEEEEEECCCCCCEEEEEECCCCCCCCC DN CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA