Definition Halothermothrix orenii H 168 chromosome, complete genome.
Accession NC_011899
Length 2,578,146

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The map label for this gene is 220932139

Identifier: 220932139

GI number: 220932139

Start: 1397148

End: 1398098

Strand: Reverse

Name: 220932139

Synonym: Hore_13020

Alternate gene names: NA

Gene position: 1398098-1397148 (Counterclockwise)

Preceding gene: 220932140

Following gene: 220932138

Centisome position: 54.23

GC content: 38.07

Gene sequence:

>951_bases
GTGATTGAATTTAAAAAAACAGAATTTAAAGGCTGGCAGGGTTATGAGTTAAAAAATAAGGTTATCAGTTTAATATTGTT
GCCGGAGGTTGGTGGTAAGATAGTAAGTTTTAGCTATCGGGGACAGGATCTCTTTTTTAATTTGCCGGAAAATAGCACTT
CTAAAATAGACCTTTCCCGTATAGGAGATGTTAAGTCTTATCGAAAGAAATTTGATTATGTGCCTACCGGTGGTTATAAA
ACCTGGCTAGCTCCACAGTCAAAGTGGGACTGGCCTCCTTACCTTGATCTGGAACTGGGGTCATATAATATGTCTGTATT
TCAGGAAAAAGATAAAATTCAAGTTGAGCTTACAAGTCCTGTCTGCCGGGAAAGTGGTATGAGGTTGATGAGGGTTATTA
CCCTCAAAGCAGGAAGCCCGGAAGTTACTATTAAGCAGGGAATGGAAAATTGTTCAACCACTGACAGGACTTTTGGGCTC
TGGGATGTTACTCAGATCCACGGAGAGGGCAGAGTTATATTCCCTATTCTTTCAGATGATAGTTTAGGTTATATTGTTAC
CCCGGAAAAAAATAACTATACAGAGCGATATAATTTTGATGGCAAAAGTTTTATAAGTGTCCACTGTCCCGGTCAGGAAA
TATTTAAACTGGGAACAGGTTATTCAAAAGGCTGGATTTTGACTCTGGTTGAAAAGGAAGACTGGCTTCTCGGTTATCTT
AAAATATTCCCTGTTTTTTCTGGAGCCCGATTTGGACACGGATATGCCATGGAAGTTTTTGATACCAATAAATATAACTA
TTTTGAAGTTGAAGTTCATGGTCCCTTAAATAAAATAAGACCACAGGATAAATATTTTTTTACTGAAGAATGGCGAGTGT
TAAGCTGGGATAAAAAGTCCGATATTAAGGAGATCATGGAGACAGTTAAATCTATTGTACCTGATGGCTAA

Upstream 100 bases:

>100_bases
GGCTAATTAAAAAAAACAATTTATTGAATAAAAAAGAATTTTAGTACAAATTTTATATATTAACTTTATAGAACAAATTT
GATGGTAGAGGATGATCTAT

Downstream 100 bases:

>100_bases
TCTTAAAAATTACAACTGTAATAGAGGGATATATTGTAAAAGGATAGATAAAAATGTTAACAAAATATTGAAATTATTTT
TTAACTATGATATTTTTATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 316; Mature: 316

Protein sequence:

>316_residues
MIEFKKTEFKGWQGYELKNKVISLILLPEVGGKIVSFSYRGQDLFFNLPENSTSKIDLSRIGDVKSYRKKFDYVPTGGYK
TWLAPQSKWDWPPYLDLELGSYNMSVFQEKDKIQVELTSPVCRESGMRLMRVITLKAGSPEVTIKQGMENCSTTDRTFGL
WDVTQIHGEGRVIFPILSDDSLGYIVTPEKNNYTERYNFDGKSFISVHCPGQEIFKLGTGYSKGWILTLVEKEDWLLGYL
KIFPVFSGARFGHGYAMEVFDTNKYNYFEVEVHGPLNKIRPQDKYFFTEEWRVLSWDKKSDIKEIMETVKSIVPDG

Sequences:

>Translated_316_residues
MIEFKKTEFKGWQGYELKNKVISLILLPEVGGKIVSFSYRGQDLFFNLPENSTSKIDLSRIGDVKSYRKKFDYVPTGGYK
TWLAPQSKWDWPPYLDLELGSYNMSVFQEKDKIQVELTSPVCRESGMRLMRVITLKAGSPEVTIKQGMENCSTTDRTFGL
WDVTQIHGEGRVIFPILSDDSLGYIVTPEKNNYTERYNFDGKSFISVHCPGQEIFKLGTGYSKGWILTLVEKEDWLLGYL
KIFPVFSGARFGHGYAMEVFDTNKYNYFEVEVHGPLNKIRPQDKYFFTEEWRVLSWDKKSDIKEIMETVKSIVPDG
>Mature_316_residues
MIEFKKTEFKGWQGYELKNKVISLILLPEVGGKIVSFSYRGQDLFFNLPENSTSKIDLSRIGDVKSYRKKFDYVPTGGYK
TWLAPQSKWDWPPYLDLELGSYNMSVFQEKDKIQVELTSPVCRESGMRLMRVITLKAGSPEVTIKQGMENCSTTDRTFGL
WDVTQIHGEGRVIFPILSDDSLGYIVTPEKNNYTERYNFDGKSFISVHCPGQEIFKLGTGYSKGWILTLVEKEDWLLGYL
KIFPVFSGARFGHGYAMEVFDTNKYNYFEVEVHGPLNKIRPQDKYFFTEEWRVLSWDKKSDIKEIMETVKSIVPDG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36538; Mature: 36538

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEFKKTEFKGWQGYELKNKVISLILLPEVGGKIVSFSYRGQDLFFNLPENSTSKIDLSR
CCCCCCCCCCCCCCEEHHCCEEEEEEEECCCCEEEEEEECCCEEEEECCCCCCCEEEHHH
IGDVKSYRKKFDYVPTGGYKTWLAPQSKWDWPPYLDLELGSYNMSVFQEKDKIQVELTSP
HCCHHHHHHHCCCCCCCCEEEEECCCCCCCCCCEEEEEECCCCEEEEECCCEEEEEECCC
VCRESGMRLMRVITLKAGSPEVTIKQGMENCSTTDRTFGLWDVTQIHGEGRVIFPILSDD
HHHHCCCEEEEEEEEECCCCCEEHHHCCCCCCCCCCEECEEEEEEECCCCEEEEEEECCC
SLGYIVTPEKNNYTERYNFDGKSFISVHCPGQEIFKLGTGYSKGWILTLVEKEDWLLGYL
CCEEEECCCCCCCCEEECCCCCEEEEEECCCHHHHEECCCCCCCEEEEEEECCCCEEEEE
KIFPVFSGARFGHGYAMEVFDTNKYNYFEVEVHGPLNKIRPQDKYFFTEEWRVLSWDKKS
EEEEECCCCCCCCCEEEEEEECCCCEEEEEEECCCHHHCCCCCCEEEECCCEEEECCCHH
DIKEIMETVKSIVPDG
HHHHHHHHHHHHCCCC
>Mature Secondary Structure
MIEFKKTEFKGWQGYELKNKVISLILLPEVGGKIVSFSYRGQDLFFNLPENSTSKIDLSR
CCCCCCCCCCCCCCEEHHCCEEEEEEEECCCCEEEEEEECCCEEEEECCCCCCCEEEHHH
IGDVKSYRKKFDYVPTGGYKTWLAPQSKWDWPPYLDLELGSYNMSVFQEKDKIQVELTSP
HCCHHHHHHHCCCCCCCCEEEEECCCCCCCCCCEEEEEECCCCEEEEECCCEEEEEECCC
VCRESGMRLMRVITLKAGSPEVTIKQGMENCSTTDRTFGLWDVTQIHGEGRVIFPILSDD
HHHHCCCEEEEEEEEECCCCCEEHHHCCCCCCCCCCEECEEEEEEECCCCEEEEEEECCC
SLGYIVTPEKNNYTERYNFDGKSFISVHCPGQEIFKLGTGYSKGWILTLVEKEDWLLGYL
CCEEEECCCCCCCCEEECCCCCEEEEEECCCHHHHEECCCCCCCEEEEEEECCCCEEEEE
KIFPVFSGARFGHGYAMEVFDTNKYNYFEVEVHGPLNKIRPQDKYFFTEEWRVLSWDKKS
EEEEECCCCCCCCCEEEEEEECCCCEEEEEEECCCHHHCCCCCCEEEECCCEEEECCCHH
DIKEIMETVKSIVPDG
HHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA