| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
Click here to switch to the map view.
The map label for this gene is 220932136
Identifier: 220932136
GI number: 220932136
Start: 1393771
End: 1395267
Strand: Reverse
Name: 220932136
Synonym: Hore_12990
Alternate gene names: NA
Gene position: 1395267-1393771 (Counterclockwise)
Preceding gene: 220932137
Following gene: 220932135
Centisome position: 54.12
GC content: 35.47
Gene sequence:
>1497_bases ATGGGATTTTTTGATAAATTAAAGAAATTTTTTAGGACAAGACAATTCAAATATGGTGGCAATACTCTGGTTATGGTGGT TATGATAATAGGAATAATGGCTGTAGTTAACTACCTGGTATACCAGCACAATGTTCGATGGGATTTAACAGAAAATAAAA GGTTTAGCCTGTCGGAAAAAACCATAAAAGTATTAAAAAATTTAGATCAGGAGGTTAAGGTAACTGGTTTTTTTAAGCCG GGAAGTAATGTCAGGGTACTGGTTAGAAGATTATTAGATAGATATCAGGATTATACTGATAATTTAGAAGTAGAGTTTGT TGACCCTGACCGGAATCCTTCAATAACAAAAGAATATAATGTGACTGCCTATGATACTATAGTTTTTGAGACTGAAAAAA GGAAAAAAAAGATTACCAGATATAACCTGTTTACCTATGGTCCGGGATACCAGGATCAGAAATTTAAAGGTGAAGAGGAG TTTACCAGGGCTTTAATAGATGTTACCAAAAATACTACAGCCAGTGTGTATTTTATAACCGGCCACGGGGAAAGTACTCT AAATGAAGATCTCTATCAGTTTAAAGATGCCCTGACCGGTGAAGGTTATCAGGTAGACAGTATAAATCTTGTTAAAGATG GTATACCTGATGATGCAAATATACTGGTTATTGCCGGACCCAGAAAAGATTATGCTATAAAAGAAATAGAATTAATCAAT AAATTTATTAATCGCGGGGGAGACCTGATGGTTTTTTTAAACCCTTCACCAAATGACAATTTCAGGAATTTGATTAACTT AATTGAAGAATGGGGAATTACTCCCCAGGATGACCTGGTTATAGACCGGAAACAGTCATATTTTTTTGACCCCTTAACTC CCATTGCTGATTATGAATACCATAATATAACCAGCAAATTAATTTCAGATGATCTTTTAGTTATCTTACCCTATACCAGA AGCTTTAAGGAGATATCTAATTATAAAGGGGATTATCAGATAGAATCTATTTTAAAAACAAGTAAAAATGCCTGGGGAGA AACCCGTTATGAAGCTGAAAGGATAGCCCGGGATGAAAAGGATTTAAAGGGTCGATTCGATCTTGTATATACAGTTATGA GACCTTTAAGTAATAAAGGTAATAATAATGACAAAATAATCGATAAAAGGAATAGTGAAACCTATGAAGAATCTGAACTT GAAGATATTCAAAAGCTTATTGATGACCAGATGAGGGCAGTAGTCCTGGGGACATCAGCTATTATTAACAACAAAGTATT ACCACAACAGGGCAACCGGGACTTCATGTTAAATTGCGTTAACTGGCTTGTCGGACAGGAAGAGCAGATCAGTATCAGGG CTAAAGGTTTTGGTATTAAGTATCTGAGTCTAACTCCTGATGCGGGCAGGTTAATATTCTATAGTACTGTGTTCCTGATT CCATTGTTGGTATTTGCAGTGGGTATAGTAATTTATCTAAGGAGGAGGCACCTGTAG
Upstream 100 bases:
>100_bases ACCACCTGTTTTATTACTTTACCCTGACTATCTTTTTTATATTTCTTACAATCCAGAATATTGAAAGGCGCCGCTGGAAC TAGTTAAGGGAGGGGAGAAT
Downstream 100 bases:
>100_bases TATGAAATTCAAATCAACCCTGGTGCTTGCTATTATTTTTGTCTTCTTGCTGGGTTATGTATACTTCTTTGAATTAAATA AACCTGTCCCTGAAGGAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 498; Mature: 497
Protein sequence:
>498_residues MGFFDKLKKFFRTRQFKYGGNTLVMVVMIIGIMAVVNYLVYQHNVRWDLTENKRFSLSEKTIKVLKNLDQEVKVTGFFKP GSNVRVLVRRLLDRYQDYTDNLEVEFVDPDRNPSITKEYNVTAYDTIVFETEKRKKKITRYNLFTYGPGYQDQKFKGEEE FTRALIDVTKNTTASVYFITGHGESTLNEDLYQFKDALTGEGYQVDSINLVKDGIPDDANILVIAGPRKDYAIKEIELIN KFINRGGDLMVFLNPSPNDNFRNLINLIEEWGITPQDDLVIDRKQSYFFDPLTPIADYEYHNITSKLISDDLLVILPYTR SFKEISNYKGDYQIESILKTSKNAWGETRYEAERIARDEKDLKGRFDLVYTVMRPLSNKGNNNDKIIDKRNSETYEESEL EDIQKLIDDQMRAVVLGTSAIINNKVLPQQGNRDFMLNCVNWLVGQEEQISIRAKGFGIKYLSLTPDAGRLIFYSTVFLI PLLVFAVGIVIYLRRRHL
Sequences:
>Translated_498_residues MGFFDKLKKFFRTRQFKYGGNTLVMVVMIIGIMAVVNYLVYQHNVRWDLTENKRFSLSEKTIKVLKNLDQEVKVTGFFKP GSNVRVLVRRLLDRYQDYTDNLEVEFVDPDRNPSITKEYNVTAYDTIVFETEKRKKKITRYNLFTYGPGYQDQKFKGEEE FTRALIDVTKNTTASVYFITGHGESTLNEDLYQFKDALTGEGYQVDSINLVKDGIPDDANILVIAGPRKDYAIKEIELIN KFINRGGDLMVFLNPSPNDNFRNLINLIEEWGITPQDDLVIDRKQSYFFDPLTPIADYEYHNITSKLISDDLLVILPYTR SFKEISNYKGDYQIESILKTSKNAWGETRYEAERIARDEKDLKGRFDLVYTVMRPLSNKGNNNDKIIDKRNSETYEESEL EDIQKLIDDQMRAVVLGTSAIINNKVLPQQGNRDFMLNCVNWLVGQEEQISIRAKGFGIKYLSLTPDAGRLIFYSTVFLI PLLVFAVGIVIYLRRRHL >Mature_497_residues GFFDKLKKFFRTRQFKYGGNTLVMVVMIIGIMAVVNYLVYQHNVRWDLTENKRFSLSEKTIKVLKNLDQEVKVTGFFKPG SNVRVLVRRLLDRYQDYTDNLEVEFVDPDRNPSITKEYNVTAYDTIVFETEKRKKKITRYNLFTYGPGYQDQKFKGEEEF TRALIDVTKNTTASVYFITGHGESTLNEDLYQFKDALTGEGYQVDSINLVKDGIPDDANILVIAGPRKDYAIKEIELINK FINRGGDLMVFLNPSPNDNFRNLINLIEEWGITPQDDLVIDRKQSYFFDPLTPIADYEYHNITSKLISDDLLVILPYTRS FKEISNYKGDYQIESILKTSKNAWGETRYEAERIARDEKDLKGRFDLVYTVMRPLSNKGNNNDKIIDKRNSETYEESELE DIQKLIDDQMRAVVLGTSAIINNKVLPQQGNRDFMLNCVNWLVGQEEQISIRAKGFGIKYLSLTPDAGRLIFYSTVFLIP LLVFAVGIVIYLRRRHL
Specific function: Unknown
COG id: COG3225
COG function: function code N; ABC-type uncharacterized transport system involved in gliding motility, auxiliary component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57806; Mature: 57675
Theoretical pI: Translated: 6.57; Mature: 6.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFFDKLKKFFRTRQFKYGGNTLVMVVMIIGIMAVVNYLVYQHNVRWDLTENKRFSLSEK CCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHH TIKVLKNLDQEVKVTGFFKPGSNVRVLVRRLLDRYQDYTDNLEVEFVDPDRNPSITKEYN HHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEC VTAYDTIVFETEKRKKKITRYNLFTYGPGYQDQKFKGEEEFTRALIDVTKNTTASVYFIT CEEEEEEEEECHHHHHHHHHEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEE GHGESTLNEDLYQFKDALTGEGYQVDSINLVKDGIPDDANILVIAGPRKDYAIKEIELIN CCCCCHHHHHHHHHHHHHCCCCEEECCEEHHHCCCCCCCCEEEEECCCCCCHHHHHHHHH KFINRGGDLMVFLNPSPNDNFRNLINLIEEWGITPQDDLVIDRKQSYFFDPLTPIADYEY HHHHCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCHH HNITSKLISDDLLVILPYTRSFKEISNYKGDYQIESILKTSKNAWGETRYEAERIARDEK HHHHHHHHCCCEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCHH DLKGRFDLVYTVMRPLSNKGNNNDKIIDKRNSETYEESELEDIQKLIDDQMRAVVLGTSA HHCCHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHEEEEECHH IINNKVLPQQGNRDFMLNCVNWLVGQEEQISIRAKGFGIKYLSLTPDAGRLIFYSTVFLI HHCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCEEEEEEECCCCCCHHHHHHHHHH PLLVFAVGIVIYLRRRHL HHHHHHHHHHHHHHHHCC >Mature Secondary Structure GFFDKLKKFFRTRQFKYGGNTLVMVVMIIGIMAVVNYLVYQHNVRWDLTENKRFSLSEK CHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHH TIKVLKNLDQEVKVTGFFKPGSNVRVLVRRLLDRYQDYTDNLEVEFVDPDRNPSITKEYN HHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEC VTAYDTIVFETEKRKKKITRYNLFTYGPGYQDQKFKGEEEFTRALIDVTKNTTASVYFIT CEEEEEEEEECHHHHHHHHHEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEE GHGESTLNEDLYQFKDALTGEGYQVDSINLVKDGIPDDANILVIAGPRKDYAIKEIELIN CCCCCHHHHHHHHHHHHHCCCCEEECCEEHHHCCCCCCCCEEEEECCCCCCHHHHHHHHH KFINRGGDLMVFLNPSPNDNFRNLINLIEEWGITPQDDLVIDRKQSYFFDPLTPIADYEY HHHHCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCHH HNITSKLISDDLLVILPYTRSFKEISNYKGDYQIESILKTSKNAWGETRYEAERIARDEK HHHHHHHHCCCEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCHH DLKGRFDLVYTVMRPLSNKGNNNDKIIDKRNSETYEESELEDIQKLIDDQMRAVVLGTSA HHCCHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHEEEEECHH IINNKVLPQQGNRDFMLNCVNWLVGQEEQISIRAKGFGIKYLSLTPDAGRLIFYSTVFLI HHCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCEEEEEEECCCCCCHHHHHHHHHH PLLVFAVGIVIYLRRRHL HHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA