| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220932087
Identifier: 220932087
GI number: 220932087
Start: 1343661
End: 1344989
Strand: Reverse
Name: 220932087
Synonym: Hore_12500
Alternate gene names: NA
Gene position: 1344989-1343661 (Counterclockwise)
Preceding gene: 220932088
Following gene: 220932086
Centisome position: 52.17
GC content: 39.05
Gene sequence:
>1329_bases ATGGAGAAATTAAAAGAGCAATTACCTGATGGTTTTGAATCGCTGGAACTTTTTTTAGAGGAATCGTATCCGGCTGATAT TGCTGATTTTTTATCAAAACTGGATGAAGAAGAAGTCAAGTATATTTTTAGGGAAAAACTACCCCGGGAAATCTGGTCAG AGGTTATAAGTTACCTTGACCATGACTTAATGTATTTTTTATCGAGGTTTTTCTCTGAATCGGAACTATCAGATATTTTA AGTGATATGCATCCTGATGACGCGGCCGATTTTCTAGGGTCAATGCCAGTAGGTAAAGTTAAAGAAACCTTAAACCTGTT AAGAACTAATAAAGCATCAGAGTTGAAAAGACTACTCGGTTATGATGATGAGAGTGCCGGGGGTCTTATGACCACCGAAT ATTTAGCCTTTTATAGTGACCAGACGGCCCAGCAGGTTTTAGAAAAACTTAGAGAGATTAGCCCTGATGCTGAAATGATT TATTATATATATGTTATTTCCCGTACCAAGGAACTGGTAGGGGTTTTATCGGTCAGGCAGCTTTTGGCAGCCCAACCTGA TATTTTATTAGAGGAAATAATGAATAATAATGTTATAAAAGTAAGTGTTAACCTCGACCGGGAAGAAGTAGCCCATATCT TTGCTAAATATGATTTGCTGGCCCTTCCTGTTGTTAATAATAAAAATCAATTAATGGGAATTATAACTGTGGATGATGTT ATTGATGTTATTGAAGAAGAGGCCACTGAGGACATATACAAAATGGCAGCTACGGCTGATATAAATGTTGAACGAAATGG TCTCCTGTCAGGTGTCAAAAAACGTATTCCATGGCTCTTAATTTTACTGGTAGGGGATTTAATGTCAGGAACGGTTATTA GAAACTTTGAAACGCCCTTACAACAGGTTGTAGCCCTGGCTTTTTTTATTCCGGTATTGATGGATATGGGTGGTAATGTA GGAACACAGTCACTGACAGTTGTGGTTAGAGGACTCGCCACCGGAGAGCTGCATTTTTCCCGGTTCTGGAGCCATCTCTG GGAGGAGCTAAAGGTAGGAATTGTAATGGCCCTTATACTGGGGTCTTCGCTATCTGTAGTTGCCCTGTTATGGCAGGATA ATCCTGTTCTGGGCCTAATTGTGGGTATTTCCATGTTTATTACACTGGTGACAGCTATTATTGCGGGAACAACTATACCT TTTATTATGGAAGCTATCGGGGCTGATCCTGCTGTAGCAGCCGGGCCATTTATTACGACTTTAATTGATATGTCCGGATT ATTTATTTATTTTACTCTGGCTACACTTTTAATGGAAAAATTATTATAA
Upstream 100 bases:
>100_bases CAGACAAAAGTGTATCTGGATTTATGGGTCAAGATTGAAAAAGACTGGAGGGAAAAAGAAGGACTGGTTAAGCGTATGGG CTACAAGGGGTGAAATAGAA
Downstream 100 bases:
>100_bases AAGAAGGATAATTTATGATAACGAAGAATATAAATATTAAATTAAATACCAGGATATTATAAGAATAACATGATTAAGGA GTGAAAGTTATGGCAATCAA
Product: magnesium transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 442; Mature: 442
Protein sequence:
>442_residues MEKLKEQLPDGFESLELFLEESYPADIADFLSKLDEEEVKYIFREKLPREIWSEVISYLDHDLMYFLSRFFSESELSDIL SDMHPDDAADFLGSMPVGKVKETLNLLRTNKASELKRLLGYDDESAGGLMTTEYLAFYSDQTAQQVLEKLREISPDAEMI YYIYVISRTKELVGVLSVRQLLAAQPDILLEEIMNNNVIKVSVNLDREEVAHIFAKYDLLALPVVNNKNQLMGIITVDDV IDVIEEEATEDIYKMAATADINVERNGLLSGVKKRIPWLLILLVGDLMSGTVIRNFETPLQQVVALAFFIPVLMDMGGNV GTQSLTVVVRGLATGELHFSRFWSHLWEELKVGIVMALILGSSLSVVALLWQDNPVLGLIVGISMFITLVTAIIAGTTIP FIMEAIGADPAVAAGPFITTLIDMSGLFIYFTLATLLMEKLL
Sequences:
>Translated_442_residues MEKLKEQLPDGFESLELFLEESYPADIADFLSKLDEEEVKYIFREKLPREIWSEVISYLDHDLMYFLSRFFSESELSDIL SDMHPDDAADFLGSMPVGKVKETLNLLRTNKASELKRLLGYDDESAGGLMTTEYLAFYSDQTAQQVLEKLREISPDAEMI YYIYVISRTKELVGVLSVRQLLAAQPDILLEEIMNNNVIKVSVNLDREEVAHIFAKYDLLALPVVNNKNQLMGIITVDDV IDVIEEEATEDIYKMAATADINVERNGLLSGVKKRIPWLLILLVGDLMSGTVIRNFETPLQQVVALAFFIPVLMDMGGNV GTQSLTVVVRGLATGELHFSRFWSHLWEELKVGIVMALILGSSLSVVALLWQDNPVLGLIVGISMFITLVTAIIAGTTIP FIMEAIGADPAVAAGPFITTLIDMSGLFIYFTLATLLMEKLL >Mature_442_residues MEKLKEQLPDGFESLELFLEESYPADIADFLSKLDEEEVKYIFREKLPREIWSEVISYLDHDLMYFLSRFFSESELSDIL SDMHPDDAADFLGSMPVGKVKETLNLLRTNKASELKRLLGYDDESAGGLMTTEYLAFYSDQTAQQVLEKLREISPDAEMI YYIYVISRTKELVGVLSVRQLLAAQPDILLEEIMNNNVIKVSVNLDREEVAHIFAKYDLLALPVVNNKNQLMGIITVDDV IDVIEEEATEDIYKMAATADINVERNGLLSGVKKRIPWLLILLVGDLMSGTVIRNFETPLQQVVALAFFIPVLMDMGGNV GTQSLTVVVRGLATGELHFSRFWSHLWEELKVGIVMALILGSSLSVVALLWQDNPVLGLIVGISMFITLVTAIIAGTTIP FIMEAIGADPAVAAGPFITTLIDMSGLFIYFTLATLLMEKLL
Specific function: Acts as a magnesium transporter [H]
COG id: COG2239
COG function: function code P; Mg/Co/Ni transporter MgtE (contains CBS domain)
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 - InterPro: IPR006668 - InterPro: IPR006667 - InterPro: IPR006669 [H]
Pfam domain/function: PF00571 CBS; PF01769 MgtE; PF03448 MgtE_N [H]
EC number: NA
Molecular weight: Translated: 49405; Mature: 49405
Theoretical pI: Translated: 4.17; Mature: 4.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKLKEQLPDGFESLELFLEESYPADIADFLSKLDEEEVKYIFREKLPREIWSEVISYLD CCHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHCHHHHHHHHHHHCCHHHHHHHHHHHH HDLMYFLSRFFSESELSDILSDMHPDDAADFLGSMPVGKVKETLNLLRTNKASELKRLLG HHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHC YDDESAGGLMTTEYLAFYSDQTAQQVLEKLREISPDAEMIYYIYVISRTKELVGVLSVRQ CCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCHHEEEEHHHHHHHHHHHHHHHHHH LLAAQPDILLEEIMNNNVIKVSVNLDREEVAHIFAKYDLLALPVVNNKNQLMGIITVDDV HHHCCHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHEEEEEECCCCCEEEEEEHHHH IDVIEEEATEDIYKMAATADINVERNGLLSGVKKRIPWLLILLVGDLMSGTVIRNFETPL HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH QQVVALAFFIPVLMDMGGNVGTQSLTVVVRGLATGELHFSRFWSHLWEELKVGIVMALIL HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH GSSLSVVALLWQDNPVLGLIVGISMFITLVTAIIAGTTIPFIMEAIGADPAVAAGPFITT CCCHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCHHHHH LIDMSGLFIYFTLATLLMEKLL HHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MEKLKEQLPDGFESLELFLEESYPADIADFLSKLDEEEVKYIFREKLPREIWSEVISYLD CCHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHCHHHHHHHHHHHCCHHHHHHHHHHHH HDLMYFLSRFFSESELSDILSDMHPDDAADFLGSMPVGKVKETLNLLRTNKASELKRLLG HHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHC YDDESAGGLMTTEYLAFYSDQTAQQVLEKLREISPDAEMIYYIYVISRTKELVGVLSVRQ CCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCHHEEEEHHHHHHHHHHHHHHHHHH LLAAQPDILLEEIMNNNVIKVSVNLDREEVAHIFAKYDLLALPVVNNKNQLMGIITVDDV HHHCCHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHEEEEEECCCCCEEEEEEHHHH IDVIEEEATEDIYKMAATADINVERNGLLSGVKKRIPWLLILLVGDLMSGTVIRNFETPL HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH QQVVALAFFIPVLMDMGGNVGTQSLTVVVRGLATGELHFSRFWSHLWEELKVGIVMALIL HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH GSSLSVVALLWQDNPVLGLIVGISMFITLVTAIIAGTTIPFIMEAIGADPAVAAGPFITT CCCHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCHHHHH LIDMSGLFIYFTLATLLMEKLL HHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA