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The map label for this gene is 220932028

Identifier: 220932028

GI number: 220932028

Start: 1285219

End: 1286403

Strand: Reverse

Name: 220932028

Synonym: Hore_11910

Alternate gene names: NA

Gene position: 1286403-1285219 (Counterclockwise)

Preceding gene: 220932029

Following gene: 220932027

Centisome position: 49.9

GC content: 30.13

Gene sequence:

>1185_bases
ATGAAAAGAAAGTATTATTTATTAATATTATCAATTTTTATTTTTATAATGGCATTTAGTACTACAGGACTGGCTATTGA
AATTAATGATAATTCTTCATTTATCAAGGGAATAACATCTTATTATAATCAAAACTTTGATGAAGCTATTGTTAATTTAA
ATAAAGCAATTAAAAATAATAATAATGAACAAATAATAGTTGATTCCCTTTACTATCAAACCCTGTGCTATATTGGGAAA
AATGATATTGTCAAAGCTAAAGAAAACATCTTAAAATTAAAAAAAATGGGATATGAATTTGGAATTATTCACTGGAAACT
TGGTGAGGTTTACTTAAATAAACATAAACAATTTGATAGTCCATTTTATAATGAAGCAAAAAAAGAACTGGAAAAAGCTT
ATTTACTTGGTATTAATACTACTCTTTTCCACAGGAGCCTTGCTCTTGTCTATAAAAATCTTGACGAATTAGATAAAGCA
GAAGAGGAGTATGAAATGATAATAGCCCAGAATGGACAAGCCGAAGATTATATTAATCTGGCTTCTATTTATAAAAAACT
GGGTAAGGTGAATTTGGCCATTAATACTTATGAAAAGGCTCTTGATATGACTGAAAGCACTCAGAATAGGATATCAATTT
ATTCAAACCTGGCTGAACTTTACATGAATGATAAAGATTATGAGAAGGCGATAAAAGTTCTTGAGGAAAGTAAAAAGATT
AATCCTGATTTTGTTGCTATAAGTACTAAACTTGGTGAGGCCTATTATTTAAGTGGCAATTATGAACTGGCCAGAGAGGA
ATTTGAAAAAGTAGTATCAATCAATGATAAATCCTATAAAGCCTATTATTATCTTGGAAAAATTCATGAAATTAACCACA
ATGAGGATAAAGCCATTTATTATTATAAACAGGCCCTCAAATATAACCCCGAATATGCCTCAGCATATATCGCTCTGGGA
GATATTTATATTAGACAGGATAAACCCTATTTAGCCATTTCCCATTATTCAACTGCAATTGAAAAAAACCCGAATTACCC
TGATAGCCATTTCCACCTTGCGGTAACTTATTATATACTAGAAATGGAAGATGCAGCCATTGCTGAATTAAAGAAAACAT
TACACTTAAATCCAAATCACCGCGGTGCTCAAAAACTGTTAGAGAAATTAACAGAGGGTGAGTAA

Upstream 100 bases:

>100_bases
TTCTTTTAAATGACAGGGAAGTTGTCATCTGAAAGAGTTTTTTATTATTAATGTTTTAACAATATATTTTTGAGAGGATT
ATATCCAGGGGGGCATGTTG

Downstream 100 bases:

>100_bases
TTTTATGAGGTTATTTATTGCTGTTAATATTCCTGACAGGACAAAAGACCTTATAGAACGTAAACTCATCACTATTAAAA
GGCAGGTTAGACAGGGTATA

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: Tetratricopeptide TPR_2 Repeat Protein; TPR Domain-Containing Protein; Tetratricopeptide Repeat Domain Protein; Peptidase; Sulfotransferase; Tetratricopeptide TPR_1 Repeat-Containing Protein; Tetratricopeptide Repeat Protein; TPR-Repeat-Containing Protein; Serine/Threonine Protein Kinase With TPR Repeats; TPR Domain Protein; Peptidase S1 And S6 Chymotrypsin/Hap; Tetratricopeptide Repeat-Containing Protein; TPR Repeat-Containing Methyltransferase; Zn-Dependent Protease; Glycosyl Transferase Family Protein; Beta-Lactamase Domain-Containing Protein

Number of amino acids: Translated: 394; Mature: 394

Protein sequence:

>394_residues
MKRKYYLLILSIFIFIMAFSTTGLAIEINDNSSFIKGITSYYNQNFDEAIVNLNKAIKNNNNEQIIVDSLYYQTLCYIGK
NDIVKAKENILKLKKMGYEFGIIHWKLGEVYLNKHKQFDSPFYNEAKKELEKAYLLGINTTLFHRSLALVYKNLDELDKA
EEEYEMIIAQNGQAEDYINLASIYKKLGKVNLAINTYEKALDMTESTQNRISIYSNLAELYMNDKDYEKAIKVLEESKKI
NPDFVAISTKLGEAYYLSGNYELAREEFEKVVSINDKSYKAYYYLGKIHEINHNEDKAIYYYKQALKYNPEYASAYIALG
DIYIRQDKPYLAISHYSTAIEKNPNYPDSHFHLAVTYYILEMEDAAIAELKKTLHLNPNHRGAQKLLEKLTEGE

Sequences:

>Translated_394_residues
MKRKYYLLILSIFIFIMAFSTTGLAIEINDNSSFIKGITSYYNQNFDEAIVNLNKAIKNNNNEQIIVDSLYYQTLCYIGK
NDIVKAKENILKLKKMGYEFGIIHWKLGEVYLNKHKQFDSPFYNEAKKELEKAYLLGINTTLFHRSLALVYKNLDELDKA
EEEYEMIIAQNGQAEDYINLASIYKKLGKVNLAINTYEKALDMTESTQNRISIYSNLAELYMNDKDYEKAIKVLEESKKI
NPDFVAISTKLGEAYYLSGNYELAREEFEKVVSINDKSYKAYYYLGKIHEINHNEDKAIYYYKQALKYNPEYASAYIALG
DIYIRQDKPYLAISHYSTAIEKNPNYPDSHFHLAVTYYILEMEDAAIAELKKTLHLNPNHRGAQKLLEKLTEGE
>Mature_394_residues
MKRKYYLLILSIFIFIMAFSTTGLAIEINDNSSFIKGITSYYNQNFDEAIVNLNKAIKNNNNEQIIVDSLYYQTLCYIGK
NDIVKAKENILKLKKMGYEFGIIHWKLGEVYLNKHKQFDSPFYNEAKKELEKAYLLGINTTLFHRSLALVYKNLDELDKA
EEEYEMIIAQNGQAEDYINLASIYKKLGKVNLAINTYEKALDMTESTQNRISIYSNLAELYMNDKDYEKAIKVLEESKKI
NPDFVAISTKLGEAYYLSGNYELAREEFEKVVSINDKSYKAYYYLGKIHEINHNEDKAIYYYKQALKYNPEYASAYIALG
DIYIRQDKPYLAISHYSTAIEKNPNYPDSHFHLAVTYYILEMEDAAIAELKKTLHLNPNHRGAQKLLEKLTEGE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI32307150, Length=302, Percent_Identity=26.158940397351, Blast_Score=81, Evalue=2e-15,
Organism=Homo sapiens, GI32307148, Length=302, Percent_Identity=26.158940397351, Blast_Score=81, Evalue=2e-15,
Organism=Homo sapiens, GI224809432, Length=252, Percent_Identity=23.015873015873, Blast_Score=69, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI115532692, Length=219, Percent_Identity=28.310502283105, Blast_Score=75, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI115532690, Length=230, Percent_Identity=27.3913043478261, Blast_Score=72, Evalue=5e-13,
Organism=Drosophila melanogaster, GI17647755, Length=272, Percent_Identity=26.8382352941176, Blast_Score=82, Evalue=6e-16,
Organism=Drosophila melanogaster, GI24585827, Length=272, Percent_Identity=26.8382352941176, Blast_Score=82, Evalue=6e-16,
Organism=Drosophila melanogaster, GI24585829, Length=272, Percent_Identity=26.8382352941176, Blast_Score=82, Evalue=6e-16,
Organism=Drosophila melanogaster, GI24585440, Length=346, Percent_Identity=25.7225433526012, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24659892, Length=154, Percent_Identity=27.9220779220779, Blast_Score=66, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45849; Mature: 45849

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRKYYLLILSIFIFIMAFSTTGLAIEINDNSSFIKGITSYYNQNFDEAIVNLNKAIKNN
CCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCC
NNEQIIVDSLYYQTLCYIGKNDIVKAKENILKLKKMGYEFGIIHWKLGEVYLNKHKQFDS
CCCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEEEEEEECHHHHHHHHCCCC
PFYNEAKKELEKAYLLGINTTLFHRSLALVYKNLDELDKAEEEYEMIIAQNGQAEDYINL
CHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHCHHHHHHHHHHHEEEEECCCCCHHHHHH
ASIYKKLGKVNLAINTYEKALDMTESTQNRISIYSNLAELYMNDKDYEKAIKVLEESKKI
HHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC
NPDFVAISTKLGEAYYLSGNYELAREEFEKVVSINDKSYKAYYYLGKIHEINHNEDKAIY
CCCEEEEEEECCCEEEEECCHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCCCCCEEE
YYKQALKYNPEYASAYIALGDIYIRQDKPYLAISHYSTAIEKNPNYPDSHFHLAVTYYIL
EEHHHHHCCCCHHEEEEEEEEEEEECCCCEEEEECHHHHHHCCCCCCCCCEEEEEEEEEE
EMEDAAIAELKKTLHLNPNHRGAQKLLEKLTEGE
EECCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MKRKYYLLILSIFIFIMAFSTTGLAIEINDNSSFIKGITSYYNQNFDEAIVNLNKAIKNN
CCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCC
NNEQIIVDSLYYQTLCYIGKNDIVKAKENILKLKKMGYEFGIIHWKLGEVYLNKHKQFDS
CCCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEEEEEEECHHHHHHHHCCCC
PFYNEAKKELEKAYLLGINTTLFHRSLALVYKNLDELDKAEEEYEMIIAQNGQAEDYINL
CHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHCHHHHHHHHHHHEEEEECCCCCHHHHHH
ASIYKKLGKVNLAINTYEKALDMTESTQNRISIYSNLAELYMNDKDYEKAIKVLEESKKI
HHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC
NPDFVAISTKLGEAYYLSGNYELAREEFEKVVSINDKSYKAYYYLGKIHEINHNEDKAIY
CCCEEEEEEECCCEEEEECCHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCCCCCEEE
YYKQALKYNPEYASAYIALGDIYIRQDKPYLAISHYSTAIEKNPNYPDSHFHLAVTYYIL
EEHHHHHCCCCHHEEEEEEEEEEEECCCCEEEEECHHHHHHCCCCCCCCCEEEEEEEEEE
EMEDAAIAELKKTLHLNPNHRGAQKLLEKLTEGE
EECCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA