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The map label for this gene is slpA [H]

Identifier: 220932014

GI number: 220932014

Start: 1273437

End: 1274204

Strand: Reverse

Name: slpA [H]

Synonym: Hore_11770

Alternate gene names: 220932014

Gene position: 1274204-1273437 (Counterclockwise)

Preceding gene: 220932015

Following gene: 220932013

Centisome position: 49.42

GC content: 34.51

Gene sequence:

>768_bases
GTGAAAAAAATTATTGTTCCCTGTTTAATTGTTTTAATGTTATTTTCAGGATTAACTGTTTCTGCTGCAGATTTAAAAGA
TGTTCCAGAAGACCACTGGGCATATCAGAGTATAAAAATGTTAATCGATAAGGGGTATTTATCCCTTTACGAAGATGGTA
CTTTCCGGGGTAAGGATAGTGTTACCCGTTATGAAATAGCAGCCCTTATCGGGCGACTTCTTGAAGATATTCAACAGGGT
AAATTATCTATGTCAGAAGAGGATATTAACCAGGTAAAACGTTTATCCCTTGAATTCAGGGATGACCTGGTGGAACTGGC
CAAAAAACAGGAAATCTTTTCTGATCAGATTGAAAGGTTAAAAGAAGATGATCTCATTCAGAATGAGGATATCGGTAAGG
TTAATGAAAAAATTAGTGATTTACAGAATGATATTACCCAGATAATTGATAGTATAGTCAAAATAGCAACCCTTGAGAAA
AAAGTAGAAAAAATAAACAGCAGGATTGAAGAACTTGAAGTCGAATTAAATAATCAGGATCAGGAAATGTTACAGATCAA
AAAGGATCTTGGAGAAAGTCTCTACCAGAACTTAAAAGACCAACAGTCTATCAATATGACTAAAATCCAGAGTTTACAGG
GTGAGGTAAACAACCTTAAAGAAGAACTGGCCAAAAGCCAGGCTGAAATAAAACAACTTAGGAATGAAAATAGTAATTAC
AGATTATATCTTATTGGAGTTGCTTTGTTAGCCTTACTTGCCAGATAA

Upstream 100 bases:

>100_bases
ATTGACCTCACCTGGGGTGAATCCAGATTTTATGGAAATAATAATAACCCGATAAAAGTAGAACTACGTGGGATTGAATA
ATATTAAGGGGGTATTTTGT

Downstream 100 bases:

>100_bases
TGGAGGTTGACCATCTTGAAAAAATATAGTAAATCTATAGCACTATCCTTAATAATAATACTGACAATTTATATTTTAAC
ACCTGCATTATTCAGTTCTA

Product: S-layer domain-containing protein

Products: NA

Alternate protein names: P100 protein; Surface layer protein [H]

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MKKIIVPCLIVLMLFSGLTVSAADLKDVPEDHWAYQSIKMLIDKGYLSLYEDGTFRGKDSVTRYEIAALIGRLLEDIQQG
KLSMSEEDINQVKRLSLEFRDDLVELAKKQEIFSDQIERLKEDDLIQNEDIGKVNEKISDLQNDITQIIDSIVKIATLEK
KVEKINSRIEELEVELNNQDQEMLQIKKDLGESLYQNLKDQQSINMTKIQSLQGEVNNLKEELAKSQAEIKQLRNENSNY
RLYLIGVALLALLAR

Sequences:

>Translated_255_residues
MKKIIVPCLIVLMLFSGLTVSAADLKDVPEDHWAYQSIKMLIDKGYLSLYEDGTFRGKDSVTRYEIAALIGRLLEDIQQG
KLSMSEEDINQVKRLSLEFRDDLVELAKKQEIFSDQIERLKEDDLIQNEDIGKVNEKISDLQNDITQIIDSIVKIATLEK
KVEKINSRIEELEVELNNQDQEMLQIKKDLGESLYQNLKDQQSINMTKIQSLQGEVNNLKEELAKSQAEIKQLRNENSNY
RLYLIGVALLALLAR
>Mature_255_residues
MKKIIVPCLIVLMLFSGLTVSAADLKDVPEDHWAYQSIKMLIDKGYLSLYEDGTFRGKDSVTRYEIAALIGRLLEDIQQG
KLSMSEEDINQVKRLSLEFRDDLVELAKKQEIFSDQIERLKEDDLIQNEDIGKVNEKISDLQNDITQIIDSIVKIATLEK
KVEKINSRIEELEVELNNQDQEMLQIKKDLGESLYQNLKDQQSINMTKIQSLQGEVNNLKEELAKSQAEIKQLRNENSNY
RLYLIGVALLALLAR

Specific function: The S-layer is a paracrystalline mono-layered assembly of proteins which coat the surface of bacteria [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted, cell wall, S-layer. Note=This bacterium is covered by a S-layer with hexagonal symmetry (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SLH (S-layer homology) domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001119 [H]

Pfam domain/function: PF00395 SLH [H]

EC number: NA

Molecular weight: Translated: 29301; Mature: 29301

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIIVPCLIVLMLFSGLTVSAADLKDVPEDHWAYQSIKMLIDKGYLSLYEDGTFRGKDS
CCHHHHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH
VTRYEIAALIGRLLEDIQQGKLSMSEEDINQVKRLSLEFRDDLVELAKKQEIFSDQIERL
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KEDDLIQNEDIGKVNEKISDLQNDITQIIDSIVKIATLEKKVEKINSRIEELEVELNNQD
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
QEMLQIKKDLGESLYQNLKDQQSINMTKIQSLQGEVNNLKEELAKSQAEIKQLRNENSNY
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
RLYLIGVALLALLAR
EEHHHHHHHHHHHCC
>Mature Secondary Structure
MKKIIVPCLIVLMLFSGLTVSAADLKDVPEDHWAYQSIKMLIDKGYLSLYEDGTFRGKDS
CCHHHHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH
VTRYEIAALIGRLLEDIQQGKLSMSEEDINQVKRLSLEFRDDLVELAKKQEIFSDQIERL
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KEDDLIQNEDIGKVNEKISDLQNDITQIIDSIVKIATLEKKVEKINSRIEELEVELNNQD
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
QEMLQIKKDLGESLYQNLKDQQSINMTKIQSLQGEVNNLKEELAKSQAEIKQLRNENSNY
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
RLYLIGVALLALLAR
EEHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA