Definition Halothermothrix orenii H 168 chromosome, complete genome.
Accession NC_011899
Length 2,578,146

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The map label for this gene is 220931998

Identifier: 220931998

GI number: 220931998

Start: 1250866

End: 1251450

Strand: Reverse

Name: 220931998

Synonym: Hore_11590

Alternate gene names: NA

Gene position: 1251450-1250866 (Counterclockwise)

Preceding gene: 220931999

Following gene: 220931997

Centisome position: 48.54

GC content: 28.55

Gene sequence:

>585_bases
ATGTTTAAAAGGTTTTTTAGTATTTTTTTAGTAGGCCTTGTTATTAAAATTATGGACGATTATCTGGACATTGATATAGA
TAACTTAAAAGAAGAGATTAATATTGTAAGGGTACTGGATAGAGGTGTCCTACCATATTCTTTAATTATTATTGTTATAG
CCCTTGCCCTTAACTTTAAAGAAGCGGCTACATACTTTCTGGCCAGCTATACTGTGGGGATGGCTAAAATAAATAATTAT
GTTCTACCCAGTAAATTAAAATCATGGCAGGAAAGTATTTTTGTTTTTATTCTGAGTGTTATATTTTTTTCATGGCTTCA
GACTTTATCTGCTATAATCCTCATAACCGGATTACAGATTGTTGATGATTTTATCGATTACAGGTATGATAAATATAAAG
AAAAAAATAATATACTTGATGTAATGGGGTTTCCTACGGCTACAGCATTTTTTATGATATTATTAATAATCAGTCTTAAG
TTTTTTCCAGTTAAACTTATTTATTTTGTTATAGCCTCCACTACTCTGTATCTTTTATTCTGGCAATTATATAAATTATA
TTCTCATAATTTAAAGATGAGTTGA

Upstream 100 bases:

>100_bases
GTAAATCTCCTGAAGAATGTTATTAATGACAAGGTGATAATACCGATCTCTGCCCTTTATAAATATGGTTTTAAAGAAGT
AAAAAAGCTGGTGTTAAGTT

Downstream 100 bases:

>100_bases
TTAAAATGATATTTTTTGTAATACTCAGTGTTTTATTAGGTTTTATTATCGGATATAATCTGGGGTTTAAATCTGGTTAC
AGGAAGGGATACAGGCATGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MFKRFFSIFLVGLVIKIMDDYLDIDIDNLKEEINIVRVLDRGVLPYSLIIIVIALALNFKEAATYFLASYTVGMAKINNY
VLPSKLKSWQESIFVFILSVIFFSWLQTLSAIILITGLQIVDDFIDYRYDKYKEKNNILDVMGFPTATAFFMILLIISLK
FFPVKLIYFVIASTTLYLLFWQLYKLYSHNLKMS

Sequences:

>Translated_194_residues
MFKRFFSIFLVGLVIKIMDDYLDIDIDNLKEEINIVRVLDRGVLPYSLIIIVIALALNFKEAATYFLASYTVGMAKINNY
VLPSKLKSWQESIFVFILSVIFFSWLQTLSAIILITGLQIVDDFIDYRYDKYKEKNNILDVMGFPTATAFFMILLIISLK
FFPVKLIYFVIASTTLYLLFWQLYKLYSHNLKMS
>Mature_194_residues
MFKRFFSIFLVGLVIKIMDDYLDIDIDNLKEEINIVRVLDRGVLPYSLIIIVIALALNFKEAATYFLASYTVGMAKINNY
VLPSKLKSWQESIFVFILSVIFFSWLQTLSAIILITGLQIVDDFIDYRYDKYKEKNNILDVMGFPTATAFFMILLIISLK
FFPVKLIYFVIASTTLYLLFWQLYKLYSHNLKMS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22688; Mature: 22688

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKRFFSIFLVGLVIKIMDDYLDIDIDNLKEEINIVRVLDRGVLPYSLIIIVIALALNFK
CHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
EAATYFLASYTVGMAKINNYVLPSKLKSWQESIFVFILSVIFFSWLQTLSAIILITGLQI
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VDDFIDYRYDKYKEKNNILDVMGFPTATAFFMILLIISLKFFPVKLIYFVIASTTLYLLF
HHHHHHHHHHHHHHHCCEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WQLYKLYSHNLKMS
HHHHHHHHCCCCCC
>Mature Secondary Structure
MFKRFFSIFLVGLVIKIMDDYLDIDIDNLKEEINIVRVLDRGVLPYSLIIIVIALALNFK
CHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
EAATYFLASYTVGMAKINNYVLPSKLKSWQESIFVFILSVIFFSWLQTLSAIILITGLQI
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VDDFIDYRYDKYKEKNNILDVMGFPTATAFFMILLIISLKFFPVKLIYFVIASTTLYLLF
HHHHHHHHHHHHHHHCCEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WQLYKLYSHNLKMS
HHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA