| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220931998
Identifier: 220931998
GI number: 220931998
Start: 1250866
End: 1251450
Strand: Reverse
Name: 220931998
Synonym: Hore_11590
Alternate gene names: NA
Gene position: 1251450-1250866 (Counterclockwise)
Preceding gene: 220931999
Following gene: 220931997
Centisome position: 48.54
GC content: 28.55
Gene sequence:
>585_bases ATGTTTAAAAGGTTTTTTAGTATTTTTTTAGTAGGCCTTGTTATTAAAATTATGGACGATTATCTGGACATTGATATAGA TAACTTAAAAGAAGAGATTAATATTGTAAGGGTACTGGATAGAGGTGTCCTACCATATTCTTTAATTATTATTGTTATAG CCCTTGCCCTTAACTTTAAAGAAGCGGCTACATACTTTCTGGCCAGCTATACTGTGGGGATGGCTAAAATAAATAATTAT GTTCTACCCAGTAAATTAAAATCATGGCAGGAAAGTATTTTTGTTTTTATTCTGAGTGTTATATTTTTTTCATGGCTTCA GACTTTATCTGCTATAATCCTCATAACCGGATTACAGATTGTTGATGATTTTATCGATTACAGGTATGATAAATATAAAG AAAAAAATAATATACTTGATGTAATGGGGTTTCCTACGGCTACAGCATTTTTTATGATATTATTAATAATCAGTCTTAAG TTTTTTCCAGTTAAACTTATTTATTTTGTTATAGCCTCCACTACTCTGTATCTTTTATTCTGGCAATTATATAAATTATA TTCTCATAATTTAAAGATGAGTTGA
Upstream 100 bases:
>100_bases GTAAATCTCCTGAAGAATGTTATTAATGACAAGGTGATAATACCGATCTCTGCCCTTTATAAATATGGTTTTAAAGAAGT AAAAAAGCTGGTGTTAAGTT
Downstream 100 bases:
>100_bases TTAAAATGATATTTTTTGTAATACTCAGTGTTTTATTAGGTTTTATTATCGGATATAATCTGGGGTTTAAATCTGGTTAC AGGAAGGGATACAGGCATGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 194; Mature: 194
Protein sequence:
>194_residues MFKRFFSIFLVGLVIKIMDDYLDIDIDNLKEEINIVRVLDRGVLPYSLIIIVIALALNFKEAATYFLASYTVGMAKINNY VLPSKLKSWQESIFVFILSVIFFSWLQTLSAIILITGLQIVDDFIDYRYDKYKEKNNILDVMGFPTATAFFMILLIISLK FFPVKLIYFVIASTTLYLLFWQLYKLYSHNLKMS
Sequences:
>Translated_194_residues MFKRFFSIFLVGLVIKIMDDYLDIDIDNLKEEINIVRVLDRGVLPYSLIIIVIALALNFKEAATYFLASYTVGMAKINNY VLPSKLKSWQESIFVFILSVIFFSWLQTLSAIILITGLQIVDDFIDYRYDKYKEKNNILDVMGFPTATAFFMILLIISLK FFPVKLIYFVIASTTLYLLFWQLYKLYSHNLKMS >Mature_194_residues MFKRFFSIFLVGLVIKIMDDYLDIDIDNLKEEINIVRVLDRGVLPYSLIIIVIALALNFKEAATYFLASYTVGMAKINNY VLPSKLKSWQESIFVFILSVIFFSWLQTLSAIILITGLQIVDDFIDYRYDKYKEKNNILDVMGFPTATAFFMILLIISLK FFPVKLIYFVIASTTLYLLFWQLYKLYSHNLKMS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22688; Mature: 22688
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKRFFSIFLVGLVIKIMDDYLDIDIDNLKEEINIVRVLDRGVLPYSLIIIVIALALNFK CHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH EAATYFLASYTVGMAKINNYVLPSKLKSWQESIFVFILSVIFFSWLQTLSAIILITGLQI HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VDDFIDYRYDKYKEKNNILDVMGFPTATAFFMILLIISLKFFPVKLIYFVIASTTLYLLF HHHHHHHHHHHHHHHCCEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WQLYKLYSHNLKMS HHHHHHHHCCCCCC >Mature Secondary Structure MFKRFFSIFLVGLVIKIMDDYLDIDIDNLKEEINIVRVLDRGVLPYSLIIIVIALALNFK CHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH EAATYFLASYTVGMAKINNYVLPSKLKSWQESIFVFILSVIFFSWLQTLSAIILITGLQI HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VDDFIDYRYDKYKEKNNILDVMGFPTATAFFMILLIISLKFFPVKLIYFVIASTTLYLLF HHHHHHHHHHHHHHHCCEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WQLYKLYSHNLKMS HHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA