| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
Click here to switch to the map view.
The map label for this gene is 220931901
Identifier: 220931901
GI number: 220931901
Start: 1148709
End: 1149113
Strand: Reverse
Name: 220931901
Synonym: Hore_10590
Alternate gene names: NA
Gene position: 1149113-1148709 (Counterclockwise)
Preceding gene: 220931919
Following gene: 220931862
Centisome position: 44.57
GC content: 29.14
Gene sequence:
>405_bases TTGGATACCTTCAGAATAGAAGGACAATGGAACGGAAATAAAAATATGACCTTAAATATTCCACATTTTCCCCATTTTCA TTCCGATTTAACTACTGAATTCAATAATTTTAAAAGATATCCTCACCCTTTTGAATATTTCGCTCTTTCCCTCTGTGGGA GTTTAACAATGACTATTAGAAAAAACAGTGAAGAAAAAGGTATAAACATAAGAAATCTCTATTTAATTATTGAAGGTACT GTTAATAATGAACTTGATAAATTAATAAATTTAACCATTAACATACATATGTCCAGCAATACAACTATAAATGAGTTAGC CAGTTTACAAAAATCACTACTGGATAAAGACCCCCTTTTCAACTTTATTAAGTACAGCAATAATATTAATGTCAACTGGG GATAA
Upstream 100 bases:
>100_bases AGTTTTTAATAGATATTTTACCTGTATAAATAATGAATTTAGCTATAAATATTTTATAAAAAGGGTAAACTAAGTTTAAA TTAAAAAAGGAGGTCAAAAA
Downstream 100 bases:
>100_bases AAAACAATATGGCTTCTGGCCATAACCATTAACCCCTGAGGGCCATTCATGTATTTTTAAATACTAAACAAATATAAATA GAGTATTTTAATTCCTAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 134; Mature: 134
Protein sequence:
>134_residues MDTFRIEGQWNGNKNMTLNIPHFPHFHSDLTTEFNNFKRYPHPFEYFALSLCGSLTMTIRKNSEEKGINIRNLYLIIEGT VNNELDKLINLTINIHMSSNTTINELASLQKSLLDKDPLFNFIKYSNNINVNWG
Sequences:
>Translated_134_residues MDTFRIEGQWNGNKNMTLNIPHFPHFHSDLTTEFNNFKRYPHPFEYFALSLCGSLTMTIRKNSEEKGINIRNLYLIIEGT VNNELDKLINLTINIHMSSNTTINELASLQKSLLDKDPLFNFIKYSNNINVNWG >Mature_134_residues MDTFRIEGQWNGNKNMTLNIPHFPHFHSDLTTEFNNFKRYPHPFEYFALSLCGSLTMTIRKNSEEKGINIRNLYLIIEGT VNNELDKLINLTINIHMSSNTTINELASLQKSLLDKDPLFNFIKYSNNINVNWG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15610; Mature: 15610
Theoretical pI: Translated: 7.07; Mature: 7.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTFRIEGQWNGNKNMTLNIPHFPHFHSDLTTEFNNFKRYPHPFEYFALSLCGSLTMTIR CCCEEEEEEECCCCCEEEECCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHCCEEEEEE KNSEEKGINIRNLYLIIEGTVNNELDKLINLTINIHMSSNTTINELASLQKSLLDKDPLF CCCCCCCCEEEEEEEEEECCCCHHHHHEEEEEEEEEECCCCCHHHHHHHHHHHCCCCCHH NFIKYSNNINVNWG HHHEECCEEEEECC >Mature Secondary Structure MDTFRIEGQWNGNKNMTLNIPHFPHFHSDLTTEFNNFKRYPHPFEYFALSLCGSLTMTIR CCCEEEEEEECCCCCEEEECCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHCCEEEEEE KNSEEKGINIRNLYLIIEGTVNNELDKLINLTINIHMSSNTTINELASLQKSLLDKDPLF CCCCCCCCEEEEEEEEEECCCCHHHHHEEEEEEEEEECCCCCHHHHHHHHHHHCCCCCHH NFIKYSNNINVNWG HHHEECCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA