| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220931862
Identifier: 220931862
GI number: 220931862
Start: 1109442
End: 1110710
Strand: Reverse
Name: 220931862
Synonym: Hore_10190
Alternate gene names: NA
Gene position: 1110710-1109442 (Counterclockwise)
Preceding gene: 220931901
Following gene: 220931858
Centisome position: 43.08
GC content: 36.41
Gene sequence:
>1269_bases ATGCCTGTATTAGGTATTATAACCGAATATAACCCGTTCCATAACGGTCATCTCTACCATTTAAATCAGGCCCGTACAAT AACAGACTCTAACGCTGTTATCTGTATTATGAACGGTAATTTCGTCCAGAGGGGGGAACCGGCTCTAATAGATAAATGGG CCCGGACCCGGATGGCCCTTAAAAACGGTGTTGACCTTATCATTGAACTACCCCTGATTTACGGTATAAGGAGTGCTGAG TACTTTGCCTATGGAGCGGTAACCCTGTTAGAAGAGACAAAAACAGTTGATTATCTTGTTTTTGGTAGTGAAAGCGGGAA TACAGATATATTAAAAGTTGTAGCCCGGATCCTCTATGAGGAACCACATAACTTCAAACAATATTTAAAAAAATATATCT CACAGGGCTTATCTTTTCCCCGGGCCCGGGAAAAAGCCCTGTTAAAATATGTTCAACAAACAGATAATATTCCATATTCT GTTAATGAAATTGCCGATGTAATTAAACAACCAAATAATATCCTGGGGATTGAGTATATAAAGGCTTTATTTAGAATCAA CTCAACTATTAAACCTGTAGCCATCAGGAGAAAAGGCAAAGGATATCATTCCCATTCCCTTGAAACAAAAATAACAAGTG CCACTGCTATCAGAAAAGGGATTTATGAACAAGGCCTCAACTCTGTAAAACAGGCCATTACCCCGGTTACATATAAAATA TTAAAAGAAGAATTCGAAAATGGAAAAGGACCGGTTCAGAAACAATTACTACAACATGCTATTTTGGCTGAATTAAGGAA ATTAACCCCTGAAAAAATAAGACAATATGAAGGTGTAAAAAACGGTTTAGAATACCGGTTTCTTGAAGCTGCCCATAACT CAGGAACCCTGACCGGGTTAATAGAAAATATTAAAAATAAAAACCTTACCTGGACCAGGATCCAACGAACCCTTTTACAT ATTTTGTTTAATATAAGAGAAAAAGATTTTAGAATACTGGATAAAAAAGGTCCCCGATATTTCAGGGTACTGGGGTTTAA TAAAAAGGGAGAAAAACTTTTATCTAAAATAAAACAAAATTCAAGGCTACCCCTGATTACCCATCTCAAGCCTCATTTAA AGCAGGTAAACAGGAACAGCCTTAATCTTTTAGAAAAATCCCTGAGTTATGATGTCTTATCGTCAGATATGTATTCCCTT TTATACCCTGATCCGTCTAAAAGAAGAGGAAGAAAGGATTTTTTAATACCGGTTATAAAAAATATTTAG
Upstream 100 bases:
>100_bases TATATATACTACAATTAATACTATTATCCTTTAATGCAGTTAAAAGTTATACTTGTCTTATTTTTTAGAAAAATACCTGG TAAAAAGGAGTTGTGACTAT
Downstream 100 bases:
>100_bases GGTATTGAAACCAAGACTAAATAAACGGGAAGAATAAGACTTCAATAGAAGCCCCGGGTTTCTTGCTGGAAAAAATAATA TTAACAATTCTTTAATTGTT
Product: putative nucleotidyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 422; Mature: 421
Protein sequence:
>422_residues MPVLGIITEYNPFHNGHLYHLNQARTITDSNAVICIMNGNFVQRGEPALIDKWARTRMALKNGVDLIIELPLIYGIRSAE YFAYGAVTLLEETKTVDYLVFGSESGNTDILKVVARILYEEPHNFKQYLKKYISQGLSFPRAREKALLKYVQQTDNIPYS VNEIADVIKQPNNILGIEYIKALFRINSTIKPVAIRRKGKGYHSHSLETKITSATAIRKGIYEQGLNSVKQAITPVTYKI LKEEFENGKGPVQKQLLQHAILAELRKLTPEKIRQYEGVKNGLEYRFLEAAHNSGTLTGLIENIKNKNLTWTRIQRTLLH ILFNIREKDFRILDKKGPRYFRVLGFNKKGEKLLSKIKQNSRLPLITHLKPHLKQVNRNSLNLLEKSLSYDVLSSDMYSL LYPDPSKRRGRKDFLIPVIKNI
Sequences:
>Translated_422_residues MPVLGIITEYNPFHNGHLYHLNQARTITDSNAVICIMNGNFVQRGEPALIDKWARTRMALKNGVDLIIELPLIYGIRSAE YFAYGAVTLLEETKTVDYLVFGSESGNTDILKVVARILYEEPHNFKQYLKKYISQGLSFPRAREKALLKYVQQTDNIPYS VNEIADVIKQPNNILGIEYIKALFRINSTIKPVAIRRKGKGYHSHSLETKITSATAIRKGIYEQGLNSVKQAITPVTYKI LKEEFENGKGPVQKQLLQHAILAELRKLTPEKIRQYEGVKNGLEYRFLEAAHNSGTLTGLIENIKNKNLTWTRIQRTLLH ILFNIREKDFRILDKKGPRYFRVLGFNKKGEKLLSKIKQNSRLPLITHLKPHLKQVNRNSLNLLEKSLSYDVLSSDMYSL LYPDPSKRRGRKDFLIPVIKNI >Mature_421_residues PVLGIITEYNPFHNGHLYHLNQARTITDSNAVICIMNGNFVQRGEPALIDKWARTRMALKNGVDLIIELPLIYGIRSAEY FAYGAVTLLEETKTVDYLVFGSESGNTDILKVVARILYEEPHNFKQYLKKYISQGLSFPRAREKALLKYVQQTDNIPYSV NEIADVIKQPNNILGIEYIKALFRINSTIKPVAIRRKGKGYHSHSLETKITSATAIRKGIYEQGLNSVKQAITPVTYKIL KEEFENGKGPVQKQLLQHAILAELRKLTPEKIRQYEGVKNGLEYRFLEAAHNSGTLTGLIENIKNKNLTWTRIQRTLLHI LFNIREKDFRILDKKGPRYFRVLGFNKKGEKLLSKIKQNSRLPLITHLKPHLKQVNRNSLNLLEKSLSYDVLSSDMYSLL YPDPSKRRGRKDFLIPVIKNI
Specific function: Unknown
COG id: COG1323
COG function: function code R; Predicted nucleotidyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0348 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1019_HALOH (B8CWV6)
Other databases:
- EMBL: CP001098 - RefSeq: YP_002508770.1 - ProteinModelPortal: B8CWV6 - GeneID: 7314607 - GenomeReviews: CP001098_GR - KEGG: hor:Hore_10190 - HOGENOM: HBG477465 - OMA: ISRIGAK - ProtClustDB: CLSK2806354 - HAMAP: MF_01539 - InterPro: IPR014729 - InterPro: IPR008513 - Gene3D: G3DSA:3.40.50.620
Pfam domain/function: PF05636 DUF795
EC number: NA
Molecular weight: Translated: 48487; Mature: 48356
Theoretical pI: Translated: 10.38; Mature: 10.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVLGIITEYNPFHNGHLYHLNQARTITDSNAVICIMNGNFVQRGEPALIDKWARTRMAL CCCEEEEECCCCCCCCEEEEECCCCEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHHH KNGVDLIIELPLIYGIRSAEYFAYGAVTLLEETKTVDYLVFGSESGNTDILKVVARILYE HCCCEEEEEHHHHHCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHH EPHNFKQYLKKYISQGLSFPRAREKALLKYVQQTDNIPYSVNEIADVIKQPNNILGIEYI CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEHHHHH KALFRINSTIKPVAIRRKGKGYHSHSLETKITSATAIRKGIYEQGLNSVKQAITPVTYKI HHHHHHCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LKEEFENGKGPVQKQLLQHAILAELRKLTPEKIRQYEGVKNGLEYRFLEAAHNSGTLTGL HHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHH IENIKNKNLTWTRIQRTLLHILFNIREKDFRILDKKGPRYFRVLGFNKKGEKLLSKIKQN HHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHEECCCCCCEEEEECCCCHHHHHHHHHHHC SRLPLITHLKPHLKQVNRNSLNLLEKSLSYDVLSSDMYSLLYPDPSKRRGRKDFLIPVIK CCCCCHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCHHHHH NI CC >Mature Secondary Structure PVLGIITEYNPFHNGHLYHLNQARTITDSNAVICIMNGNFVQRGEPALIDKWARTRMAL CCEEEEECCCCCCCCEEEEECCCCEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHHH KNGVDLIIELPLIYGIRSAEYFAYGAVTLLEETKTVDYLVFGSESGNTDILKVVARILYE HCCCEEEEEHHHHHCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHH EPHNFKQYLKKYISQGLSFPRAREKALLKYVQQTDNIPYSVNEIADVIKQPNNILGIEYI CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEHHHHH KALFRINSTIKPVAIRRKGKGYHSHSLETKITSATAIRKGIYEQGLNSVKQAITPVTYKI HHHHHHCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LKEEFENGKGPVQKQLLQHAILAELRKLTPEKIRQYEGVKNGLEYRFLEAAHNSGTLTGL HHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHH IENIKNKNLTWTRIQRTLLHILFNIREKDFRILDKKGPRYFRVLGFNKKGEKLLSKIKQN HHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHEECCCCCCEEEEECCCCHHHHHHHHHHHC SRLPLITHLKPHLKQVNRNSLNLLEKSLSYDVLSSDMYSLLYPDPSKRRGRKDFLIPVIK CCCCCHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCHHHHH NI CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA