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The map label for this gene is ylbL [H]

Identifier: 220931861

GI number: 220931861

Start: 1108317

End: 1109330

Strand: Direct

Name: ylbL [H]

Synonym: Hore_10180

Alternate gene names: 220931861

Gene position: 1108317-1109330 (Clockwise)

Preceding gene: 220931860

Following gene: 220931863

Centisome position: 42.99

GC content: 37.38

Gene sequence:

>1014_bases
ATGACTGAGAATAAGGGTTTAATTAAAAGTAATGCTGTTAAATTATTTATAGCAATAATTATACTTTTTATTATTGTTAA
TTTAGTTCCGACAAAATATTATGTGATGTCACCCGGGATTGCCCAGGAATTATCTCCGATTATTACAGTAAAGGGTGGAC
ATAAAGGTGTTACCAGTGGTGATTTTATGTTGACTGCTGTTGCCTCTCACAGGGCCACCTTATTTGATATAATATATATA
TCCTTAAAAAAACCAAGGGGAATAGAGATTGAGTCGGTAGAGGAACAGCTACCACCGGGAATGGATATGGATGGATATCT
GGAAATAATGGCCAACTTAATGGAAGAAAGTAAATTACACGCCCAGGCAGTGGCTTTTAAAAAACTGGGTTATAGAGTTA
AGGTTGAGGGCAAAGGGGCTGAAATTGTAGAGGTTTTACCTGAAGGCTCGGCCGGTAATGTATTGAAAAAAGGAGATATT
ATAGTCGGAATAGATGGAAAAGAGGTTAGCTTTGCTACGGATGCTGTTAAACTGATTAGAAAACATAATATAGGTGAGGA
AGTCAAATTGAAGGTCCTCAGAGGAAAAGAGGTTATGCATTTCAGGGTTAAGACAGTAGAACTCAAAAATAGTCCTGGAA
AGGCCTCAATCGGAGTTTTAATAACAACAAGGGATTTATCCTATTATTTTCCTAAAAAGGTAATCTTTAATACGAAAAAT
ATTGTTGGTCCTTCAGCTGGAGCCATGTTTACCCTGGAAATTTATAACCAGTTGATACCTGAAGATATCACAAAGGGGAG
ACGAATTGCTGGTACGGGAACCATTTCCCTTGATGGTCATATTGGAAAAATAGATGGTGTAACCCAGAAGGTAATGGCAG
CTGAAAGAGCAGGAGCCGATTTATTCCTGTCACCGGCTAAAAATTACAGTGAAGCGAAAAAGGCTGCCAGGCGTATCAAG
GTAGTGAAAGTTAATAATATTGATGAGGCTATACGTTATTTAAAAAACAATTAA

Upstream 100 bases:

>100_bases
CATTTGACCTTGACAGGGCTGAACACTGTATCCAGCTAGGTTACAGGGCTGCCAGAGATTCTTTGCCTGAAATTATGAAA
ATTATTGAGGAGAGGGTTGA

Downstream 100 bases:

>100_bases
ATTATTTAAAAAACAATTAAAGAATTGTTAATATTATTTTTTCCAGCAAGAAACCCGGGGCTTCTATTGAAGTCTTATTC
TTCCCGTTTATTTAGTCTTG

Product: PDZ/DHR/GLGF domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 337; Mature: 336

Protein sequence:

>337_residues
MTENKGLIKSNAVKLFIAIIILFIIVNLVPTKYYVMSPGIAQELSPIITVKGGHKGVTSGDFMLTAVASHRATLFDIIYI
SLKKPRGIEIESVEEQLPPGMDMDGYLEIMANLMEESKLHAQAVAFKKLGYRVKVEGKGAEIVEVLPEGSAGNVLKKGDI
IVGIDGKEVSFATDAVKLIRKHNIGEEVKLKVLRGKEVMHFRVKTVELKNSPGKASIGVLITTRDLSYYFPKKVIFNTKN
IVGPSAGAMFTLEIYNQLIPEDITKGRRIAGTGTISLDGHIGKIDGVTQKVMAAERAGADLFLSPAKNYSEAKKAARRIK
VVKVNNIDEAIRYLKNN

Sequences:

>Translated_337_residues
MTENKGLIKSNAVKLFIAIIILFIIVNLVPTKYYVMSPGIAQELSPIITVKGGHKGVTSGDFMLTAVASHRATLFDIIYI
SLKKPRGIEIESVEEQLPPGMDMDGYLEIMANLMEESKLHAQAVAFKKLGYRVKVEGKGAEIVEVLPEGSAGNVLKKGDI
IVGIDGKEVSFATDAVKLIRKHNIGEEVKLKVLRGKEVMHFRVKTVELKNSPGKASIGVLITTRDLSYYFPKKVIFNTKN
IVGPSAGAMFTLEIYNQLIPEDITKGRRIAGTGTISLDGHIGKIDGVTQKVMAAERAGADLFLSPAKNYSEAKKAARRIK
VVKVNNIDEAIRYLKNN
>Mature_336_residues
TENKGLIKSNAVKLFIAIIILFIIVNLVPTKYYVMSPGIAQELSPIITVKGGHKGVTSGDFMLTAVASHRATLFDIIYIS
LKKPRGIEIESVEEQLPPGMDMDGYLEIMANLMEESKLHAQAVAFKKLGYRVKVEGKGAEIVEVLPEGSAGNVLKKGDII
VGIDGKEVSFATDAVKLIRKHNIGEEVKLKVLRGKEVMHFRVKTVELKNSPGKASIGVLITTRDLSYYFPKKVIFNTKNI
VGPSAGAMFTLEIYNQLIPEDITKGRRIAGTGTISLDGHIGKIDGVTQKVMAAERAGADLFLSPAKNYSEAKKAARRIKV
VKVNNIDEAIRYLKNN

Specific function: Unknown

COG id: COG3480

COG function: function code T; Predicted secreted protein containing a PDZ domain

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR008269
- InterPro:   IPR020568 [H]

Pfam domain/function: PF05362 Lon_C; PF00595 PDZ [H]

EC number: NA

Molecular weight: Translated: 36864; Mature: 36733

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTENKGLIKSNAVKLFIAIIILFIIVNLVPTKYYVMSPGIAQELSPIITVKGGHKGVTSG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHCCCEEEEECCCCCCCCC
DFMLTAVASHRATLFDIIYISLKKPRGIEIESVEEQLPPGMDMDGYLEIMANLMEESKLH
CEEEEEHHHCCCEEEEEEEEEECCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
AQAVAFKKLGYRVKVEGKGAEIVEVLPEGSAGNVLKKGDIIVGIDGKEVSFATDAVKLIR
HHHHHHHHCCCEEEECCCCCEEEEEECCCCCCCEEECCCEEEEECCCCEEHHHHHHHHHH
KHNIGEEVKLKVLRGKEVMHFRVKTVELKNSPGKASIGVLITTRDLSYYFPKKVIFNTKN
HCCCCCCEEEEEECCCEEEEEEEEEEEEECCCCCEEEEEEEEEECCCCCCCCEEEECCCC
IVGPSAGAMFTLEIYNQLIPEDITKGRRIAGTGTISLDGHIGKIDGVTQKVMAAERAGAD
CCCCCCCCEEEHHHHHHHCCHHHHCCCEEECCEEEEECCCCCCCCHHHHHHHHHHHCCCC
LFLSPAKNYSEAKKAARRIKVVKVNNIDEAIRYLKNN
EEECCCCCHHHHHHHHHEEEEEEECCHHHHHHHHHCC
>Mature Secondary Structure 
TENKGLIKSNAVKLFIAIIILFIIVNLVPTKYYVMSPGIAQELSPIITVKGGHKGVTSG
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHCCCEEEEECCCCCCCCC
DFMLTAVASHRATLFDIIYISLKKPRGIEIESVEEQLPPGMDMDGYLEIMANLMEESKLH
CEEEEEHHHCCCEEEEEEEEEECCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
AQAVAFKKLGYRVKVEGKGAEIVEVLPEGSAGNVLKKGDIIVGIDGKEVSFATDAVKLIR
HHHHHHHHCCCEEEECCCCCEEEEEECCCCCCCEEECCCEEEEECCCCEEHHHHHHHHHH
KHNIGEEVKLKVLRGKEVMHFRVKTVELKNSPGKASIGVLITTRDLSYYFPKKVIFNTKN
HCCCCCCEEEEEECCCEEEEEEEEEEEEECCCCCEEEEEEEEEECCCCCCCCEEEECCCC
IVGPSAGAMFTLEIYNQLIPEDITKGRRIAGTGTISLDGHIGKIDGVTQKVMAAERAGAD
CCCCCCCCEEEHHHHHHHCCHHHHCCCEEECCEEEEECCCCCCCCHHHHHHHHHHHCCCC
LFLSPAKNYSEAKKAARRIKVVKVNNIDEAIRYLKNN
EEECCCCCHHHHHHHHHEEEEEEECCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]