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The map label for this gene is degV [H]

Identifier: 220931854

GI number: 220931854

Start: 1100964

End: 1101863

Strand: Direct

Name: degV [H]

Synonym: Hore_10110

Alternate gene names: 220931854

Gene position: 1100964-1101863 (Clockwise)

Preceding gene: 220931853

Following gene: 220931855

Centisome position: 42.7

GC content: 37.22

Gene sequence:

>900_bases
GTGAAAGTAGGAATACTAACTGACAGCACATGTGACCTCAGTGAAGATATATTAAAACAGCACAATATAGAGATGATCCC
GCTTACAATACATTTTGGTGAAGAGATTTTTAAAGAACGTTATGAAATTACCCCTGCTCAATTCTTTGAAAGGCTGGAAA
ATACTGAAATAATATCAACTACGTCCCAGCCTTCCATTGGGTTGTTTGTGGACAAGTATAAAAAGATGGCTGAAGAGTAT
GACGCCATTATCTCCATACACCTTTCTTCCAAGTTCAGTGGTACGGTTGAATCAGCCCGGATTGCTTCCCAGCAGGTTGA
TGGTATTAAAATTGAAGTTATTGATTCTAAATCAATTAGCCTTGGACTCGGTTATCAGGCACTACTGGCAGCCAAACTTA
TTGAAGCTGGATTCAGTTTTAAAGAAATAGTGGACATGGTTAAAAAAGCCCGGGAGCATGTTGATATTTATTTTACTGTT
AATGATTTATCATATCTGGAAAAGGGTGGACGTATAGGCAAAGCCCAGGCATTTATTGGTTCTATCCTTAATGTTTATCC
TCTTCTGGCTATACCGGGGACTGATGGAGAAATAATTCCTCTGGAAAAGGTCAGGGGGAGTAAGCGTATTATTAAAAAAC
TGGTCAGTCGGGCTTTAGATTCTTTAAAAAATGAAAAATACGCCTGGATTGGTCTGGTTCATGGGGCTGACAAGGATTCC
TTTAACAAGTTAAATAAAAATTTAACCAATCAAAAATATATTAAAGAAAGAGCTGACTTATATCAGATAGATACTGGATG
GATTAGCTCTATTATAGGTTGTCATGCTGGTCCTTCAGTTTACGGGATTGTTTTAATTAAAGGGGATATATTAAATTATG
AAGGAGAAAATGCCCAGTAG

Upstream 100 bases:

>100_bases
GATACCCTGGAAGAAGAATTTAATTTTGAAGATATAGAGCTATACAGAGGAGGGCAACCACTGTATCCGTATATCATATC
AGTAGAATAGGGGTGTAATT

Downstream 100 bases:

>100_bases
TGTCCAGTTCGTCAGGGGAGTTGGACCACGGTATGCAGAGGTATTAAAAAAATTAAATATTAATACTGTCAAAGACCTCC
TGTACTACTTTCCCAGGACT

Product: degV family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 299

Protein sequence:

>299_residues
MKVGILTDSTCDLSEDILKQHNIEMIPLTIHFGEEIFKERYEITPAQFFERLENTEIISTTSQPSIGLFVDKYKKMAEEY
DAIISIHLSSKFSGTVESARIASQQVDGIKIEVIDSKSISLGLGYQALLAAKLIEAGFSFKEIVDMVKKAREHVDIYFTV
NDLSYLEKGGRIGKAQAFIGSILNVYPLLAIPGTDGEIIPLEKVRGSKRIIKKLVSRALDSLKNEKYAWIGLVHGADKDS
FNKLNKNLTNQKYIKERADLYQIDTGWISSIIGCHAGPSVYGIVLIKGDILNYEGENAQ

Sequences:

>Translated_299_residues
MKVGILTDSTCDLSEDILKQHNIEMIPLTIHFGEEIFKERYEITPAQFFERLENTEIISTTSQPSIGLFVDKYKKMAEEY
DAIISIHLSSKFSGTVESARIASQQVDGIKIEVIDSKSISLGLGYQALLAAKLIEAGFSFKEIVDMVKKAREHVDIYFTV
NDLSYLEKGGRIGKAQAFIGSILNVYPLLAIPGTDGEIIPLEKVRGSKRIIKKLVSRALDSLKNEKYAWIGLVHGADKDS
FNKLNKNLTNQKYIKERADLYQIDTGWISSIIGCHAGPSVYGIVLIKGDILNYEGENAQ
>Mature_299_residues
MKVGILTDSTCDLSEDILKQHNIEMIPLTIHFGEEIFKERYEITPAQFFERLENTEIISTTSQPSIGLFVDKYKKMAEEY
DAIISIHLSSKFSGTVESARIASQQVDGIKIEVIDSKSISLGLGYQALLAAKLIEAGFSFKEIVDMVKKAREHVDIYFTV
NDLSYLEKGGRIGKAQAFIGSILNVYPLLAIPGTDGEIIPLEKVRGSKRIIKKLVSRALDSLKNEKYAWIGLVHGADKDS
FNKLNKNLTNQKYIKERADLYQIDTGWISSIIGCHAGPSVYGIVLIKGDILNYEGENAQ

Specific function: Unknown

COG id: COG1307

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DegV domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003797 [H]

Pfam domain/function: PF02645 DegV [H]

EC number: NA

Molecular weight: Translated: 33339; Mature: 33339

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVGILTDSTCDLSEDILKQHNIEMIPLTIHFGEEIFKERYEITPAQFFERLENTEIIST
CEEEEECCCCCCHHHHHHHHCCCEEEEEEEECCHHHHHHHHCCCHHHHHHHHCCCEEEEE
TSQPSIGLFVDKYKKMAEEYDAIISIHLSSKFSGTVESARIASQQVDGIKIEVIDSKSIS
CCCCCCHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHHHHHHCCCCEEEEEEECCCEE
LGLGYQALLAAKLIEAGFSFKEIVDMVKKAREHVDIYFTVNDLSYLEKGGRIGKAQAFIG
ECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCEEEEEEECCHHHHHCCCCCCHHHHHHH
SILNVYPLLAIPGTDGEIIPLEKVRGSKRIIKKLVSRALDSLKNEKYAWIGLVHGADKDS
HHHHHHHEEEECCCCCCEEEHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCHH
FNKLNKNLTNQKYIKERADLYQIDTGWISSIIGCHAGPSVYGIVLIKGDILNYEGENAQ
HHHHHHCCCHHHHHHHHHCEEEECHHHHHHHHHCCCCCCEEEEEEEEEEEECCCCCCCC
>Mature Secondary Structure
MKVGILTDSTCDLSEDILKQHNIEMIPLTIHFGEEIFKERYEITPAQFFERLENTEIIST
CEEEEECCCCCCHHHHHHHHCCCEEEEEEEECCHHHHHHHHCCCHHHHHHHHCCCEEEEE
TSQPSIGLFVDKYKKMAEEYDAIISIHLSSKFSGTVESARIASQQVDGIKIEVIDSKSIS
CCCCCCHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHHHHHHCCCCEEEEEEECCCEE
LGLGYQALLAAKLIEAGFSFKEIVDMVKKAREHVDIYFTVNDLSYLEKGGRIGKAQAFIG
ECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCEEEEEEECCHHHHHCCCCCCHHHHHHH
SILNVYPLLAIPGTDGEIIPLEKVRGSKRIIKKLVSRALDSLKNEKYAWIGLVHGADKDS
HHHHHHHEEEECCCCCCEEEHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCHH
FNKLNKNLTNQKYIKERADLYQIDTGWISSIIGCHAGPSVYGIVLIKGDILNYEGENAQ
HHHHHHCCCHHHHHHHHHCEEEECHHHHHHHHHCCCCCCEEEEEEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8412657; 9384377; 3141378 [H]