Definition Halothermothrix orenii H 168 chromosome, complete genome.
Accession NC_011899
Length 2,578,146

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The map label for this gene is yloU [H]

Identifier: 220931852

GI number: 220931852

Start: 1098952

End: 1099314

Strand: Direct

Name: yloU [H]

Synonym: Hore_10090

Alternate gene names: 220931852

Gene position: 1098952-1099314 (Clockwise)

Preceding gene: 220931850

Following gene: 220931853

Centisome position: 42.63

GC content: 36.91

Gene sequence:

>363_bases
ATGGAAAAGGAATGGACTAACGAGTTAGGAAAAATTACTATTGCCAGAGAAGTGATTTCAAAAATAGCAGGTCTTGCTGC
CATGGAATGTTACGGTTTGGTTGGTATGTCAAGCCGTAATGTGCAGGATGGCCTGGCAGATTTACTGGGCTGGGATAATC
TCAGTAAAGGTGTTGCTGTTGACATTGAAGATGATAAAGTAAGTTTGGAATTAAATATTATTGTTGAATATGGAACCAAT
ATACATGAAGTAGCCCATAATATTATGGAGCGGGTAAAGTATACATTAGAGGATAAAATAGGAATAAATGTGGAAAAAAT
TGATATCAATGTACAGGAAGTGAGAGTTGGCAATGCCGGTTAA

Upstream 100 bases:

>100_bases
TATTACATGTTTACTCATTAAGGTTCAAATAATAAGTAAAGCAGTTGCATTAACTTTTATATTATTGTAGAATAATTATG
AGAAAAGAGAGGTGGTATTA

Downstream 100 bases:

>100_bases
TGAGATTTCCCACGGTTCATTAAGTAATGTAGACGGAAAAAAATTTAGAGAAATGTTGTACACAGCACTGGCCTGGTTAA
AAGAACAGCAATCCTTTATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 120

Protein sequence:

>120_residues
MEKEWTNELGKITIAREVISKIAGLAAMECYGLVGMSSRNVQDGLADLLGWDNLSKGVAVDIEDDKVSLELNIIVEYGTN
IHEVAHNIMERVKYTLEDKIGINVEKIDINVQEVRVGNAG

Sequences:

>Translated_120_residues
MEKEWTNELGKITIAREVISKIAGLAAMECYGLVGMSSRNVQDGLADLLGWDNLSKGVAVDIEDDKVSLELNIIVEYGTN
IHEVAHNIMERVKYTLEDKIGINVEKIDINVQEVRVGNAG
>Mature_120_residues
MEKEWTNELGKITIAREVISKIAGLAAMECYGLVGMSSRNVQDGLADLLGWDNLSKGVAVDIEDDKVSLELNIIVEYGTN
IHEVAHNIMERVKYTLEDKIGINVEKIDINVQEVRVGNAG

Specific function: Unknown

COG id: COG1302

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the asp23 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005531 [H]

Pfam domain/function: PF03780 DUF322 [H]

EC number: NA

Molecular weight: Translated: 13242; Mature: 13242

Theoretical pI: Translated: 4.34; Mature: 4.34

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKEWTNELGKITIAREVISKIAGLAAMECYGLVGMSSRNVQDGLADLLGWDNLSKGVAV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCEEE
DIEDDKVSLELNIIVEYGTNIHEVAHNIMERVKYTLEDKIGINVEKIDINVQEVRVGNAG
EECCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECEEEEEEECCCC
>Mature Secondary Structure
MEKEWTNELGKITIAREVISKIAGLAAMECYGLVGMSSRNVQDGLADLLGWDNLSKGVAV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCEEE
DIEDDKVSLELNIIVEYGTNIHEVAHNIMERVKYTLEDKIGINVEKIDINVQEVRVGNAG
EECCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9534248; 9384377 [H]