| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is yloU [H]
Identifier: 220931852
GI number: 220931852
Start: 1098952
End: 1099314
Strand: Direct
Name: yloU [H]
Synonym: Hore_10090
Alternate gene names: 220931852
Gene position: 1098952-1099314 (Clockwise)
Preceding gene: 220931850
Following gene: 220931853
Centisome position: 42.63
GC content: 36.91
Gene sequence:
>363_bases ATGGAAAAGGAATGGACTAACGAGTTAGGAAAAATTACTATTGCCAGAGAAGTGATTTCAAAAATAGCAGGTCTTGCTGC CATGGAATGTTACGGTTTGGTTGGTATGTCAAGCCGTAATGTGCAGGATGGCCTGGCAGATTTACTGGGCTGGGATAATC TCAGTAAAGGTGTTGCTGTTGACATTGAAGATGATAAAGTAAGTTTGGAATTAAATATTATTGTTGAATATGGAACCAAT ATACATGAAGTAGCCCATAATATTATGGAGCGGGTAAAGTATACATTAGAGGATAAAATAGGAATAAATGTGGAAAAAAT TGATATCAATGTACAGGAAGTGAGAGTTGGCAATGCCGGTTAA
Upstream 100 bases:
>100_bases TATTACATGTTTACTCATTAAGGTTCAAATAATAAGTAAAGCAGTTGCATTAACTTTTATATTATTGTAGAATAATTATG AGAAAAGAGAGGTGGTATTA
Downstream 100 bases:
>100_bases TGAGATTTCCCACGGTTCATTAAGTAATGTAGACGGAAAAAAATTTAGAGAAATGTTGTACACAGCACTGGCCTGGTTAA AAGAACAGCAATCCTTTATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 120; Mature: 120
Protein sequence:
>120_residues MEKEWTNELGKITIAREVISKIAGLAAMECYGLVGMSSRNVQDGLADLLGWDNLSKGVAVDIEDDKVSLELNIIVEYGTN IHEVAHNIMERVKYTLEDKIGINVEKIDINVQEVRVGNAG
Sequences:
>Translated_120_residues MEKEWTNELGKITIAREVISKIAGLAAMECYGLVGMSSRNVQDGLADLLGWDNLSKGVAVDIEDDKVSLELNIIVEYGTN IHEVAHNIMERVKYTLEDKIGINVEKIDINVQEVRVGNAG >Mature_120_residues MEKEWTNELGKITIAREVISKIAGLAAMECYGLVGMSSRNVQDGLADLLGWDNLSKGVAVDIEDDKVSLELNIIVEYGTN IHEVAHNIMERVKYTLEDKIGINVEKIDINVQEVRVGNAG
Specific function: Unknown
COG id: COG1302
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the asp23 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005531 [H]
Pfam domain/function: PF03780 DUF322 [H]
EC number: NA
Molecular weight: Translated: 13242; Mature: 13242
Theoretical pI: Translated: 4.34; Mature: 4.34
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKEWTNELGKITIAREVISKIAGLAAMECYGLVGMSSRNVQDGLADLLGWDNLSKGVAV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCEEE DIEDDKVSLELNIIVEYGTNIHEVAHNIMERVKYTLEDKIGINVEKIDINVQEVRVGNAG EECCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECEEEEEEECCCC >Mature Secondary Structure MEKEWTNELGKITIAREVISKIAGLAAMECYGLVGMSSRNVQDGLADLLGWDNLSKGVAV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCEEE DIEDDKVSLELNIIVEYGTNIHEVAHNIMERVKYTLEDKIGINVEKIDINVQEVRVGNAG EECCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9534248; 9384377 [H]