| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220931808
Identifier: 220931808
GI number: 220931808
Start: 1043941
End: 1044888
Strand: Direct
Name: 220931808
Synonym: Hore_09650
Alternate gene names: NA
Gene position: 1043941-1044888 (Clockwise)
Preceding gene: 220931807
Following gene: 220931809
Centisome position: 40.49
GC content: 34.49
Gene sequence:
>948_bases TTGAAAATCATTGATTTACATTGTGATACCATCAGTAAACTGTATAAATTTTCTGGCAGACAGGGATTAAGGAGTAATGA ATTACATGTTGACCTTGAAAAATTGAGACAGGCAGGTAGTAAAGCCCAGTTTTTTGCCCTGTTTCTGGACAAAAATAATT TGCCAGCAGGTACGGATTCTTATCAAATCTTTTTAGAAATGCTCGATGTTTTTAAAAAAGAGCTTGCCAAAAACAGTGAC ATGGTTTCCCTGGCCAGAAATTATAGTGAATTACAAAAAAATGAAAGCGAGGGTAAAATATCTGCCTTTTTAACGATTGA GGAAGGGGCTGTTCTTCAGGGTAAATTGAGTAATTTAAAAAAAATATACCGACTCGGGGTCAGGCTTATTACTTTAACCT GGAATTACCCCAATGAGATTGGTTTTCCAAACATGAAAAATTATAAAGATAAGGGTTTAACACCTTTTGGTAATGAAGTT ATCCGGGAAATGAATCACCTGGGAATGATAATAGATGTATCTCACCTGTCTGATAAAGGGTTTTATGATGTTATAAATTT ATCCAGAAAGCCCGTTATTGCCTCTCATTCCAATGCACGTTCTTTACATAACCATCCCCGGAATTTAACCGATGATATGA TTAAACTTATTGGTGAACAAGGGGGAGTTATCGGGATTAATTTTAATTCATATTTTTTAGGGGATACAAAAATAAGCACC ATTGCAGATATTATTAAACATATTAAGCATGTTAAAAAGGTCGGTGGTAGTGATGTTATTGCCCTCGGTTCAGATTATGA TGGGATTTCCTGCCAGCTGGAACTCAAAAATATTGGGCAAATACCGAATCTTATTTATACCCTGGAAAAGTATGGATTCT CTGATGATGATATAGATAAATTTACCTATAAAAATGTGGAAAGAGTTATCAAGGATGTCTTAAATTAA
Upstream 100 bases:
>100_bases ACAATTATCTATACTGGGTAAAGAAATAAGATAAATTTAAAGTAATAGAATAATAATAAGGATATAATTTTATTTAAAAA CCTGGGGGGGTCAATTTAAC
Downstream 100 bases:
>100_bases TTTGGTTTATCTGTACTGGGTTATTTATATTAATTATTTTTACAGTAAAAGGTTTTTGGGTCTTTTCAAAGAATTAATTA TATAAATTTGTCTTTTATAG
Product: Membrane dipeptidase
Products: NA
Alternate protein names: ORF X [H]
Number of amino acids: Translated: 315; Mature: 315
Protein sequence:
>315_residues MKIIDLHCDTISKLYKFSGRQGLRSNELHVDLEKLRQAGSKAQFFALFLDKNNLPAGTDSYQIFLEMLDVFKKELAKNSD MVSLARNYSELQKNESEGKISAFLTIEEGAVLQGKLSNLKKIYRLGVRLITLTWNYPNEIGFPNMKNYKDKGLTPFGNEV IREMNHLGMIIDVSHLSDKGFYDVINLSRKPVIASHSNARSLHNHPRNLTDDMIKLIGEQGGVIGINFNSYFLGDTKIST IADIIKHIKHVKKVGGSDVIALGSDYDGISCQLELKNIGQIPNLIYTLEKYGFSDDDIDKFTYKNVERVIKDVLN
Sequences:
>Translated_315_residues MKIIDLHCDTISKLYKFSGRQGLRSNELHVDLEKLRQAGSKAQFFALFLDKNNLPAGTDSYQIFLEMLDVFKKELAKNSD MVSLARNYSELQKNESEGKISAFLTIEEGAVLQGKLSNLKKIYRLGVRLITLTWNYPNEIGFPNMKNYKDKGLTPFGNEV IREMNHLGMIIDVSHLSDKGFYDVINLSRKPVIASHSNARSLHNHPRNLTDDMIKLIGEQGGVIGINFNSYFLGDTKIST IADIIKHIKHVKKVGGSDVIALGSDYDGISCQLELKNIGQIPNLIYTLEKYGFSDDDIDKFTYKNVERVIKDVLN >Mature_315_residues MKIIDLHCDTISKLYKFSGRQGLRSNELHVDLEKLRQAGSKAQFFALFLDKNNLPAGTDSYQIFLEMLDVFKKELAKNSD MVSLARNYSELQKNESEGKISAFLTIEEGAVLQGKLSNLKKIYRLGVRLITLTWNYPNEIGFPNMKNYKDKGLTPFGNEV IREMNHLGMIIDVSHLSDKGFYDVINLSRKPVIASHSNARSLHNHPRNLTDDMIKLIGEQGGVIGINFNSYFLGDTKIST IADIIKHIKHVKKVGGSDVIALGSDYDGISCQLELKNIGQIPNLIYTLEKYGFSDDDIDKFTYKNVERVIKDVLN
Specific function: Unknown
COG id: COG2355
COG function: function code E; Zn-dependent dipeptidase, microsomal dipeptidase homolog
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M19 family [H]
Homologues:
Organism=Homo sapiens, GI189458885, Length=297, Percent_Identity=27.2727272727273, Blast_Score=145, Evalue=6e-35, Organism=Homo sapiens, GI4758190, Length=297, Percent_Identity=27.2727272727273, Blast_Score=145, Evalue=6e-35, Organism=Homo sapiens, GI11641269, Length=297, Percent_Identity=31.3131313131313, Blast_Score=142, Evalue=3e-34, Organism=Homo sapiens, GI193211608, Length=297, Percent_Identity=28.956228956229, Blast_Score=125, Evalue=4e-29, Organism=Homo sapiens, GI193211610, Length=297, Percent_Identity=28.956228956229, Blast_Score=122, Evalue=5e-28, Organism=Drosophila melanogaster, GI221475880, Length=297, Percent_Identity=34.006734006734, Blast_Score=173, Evalue=1e-43, Organism=Drosophila melanogaster, GI161083233, Length=293, Percent_Identity=31.740614334471, Blast_Score=169, Evalue=2e-42, Organism=Drosophila melanogaster, GI281362638, Length=293, Percent_Identity=31.3993174061433, Blast_Score=164, Evalue=9e-41, Organism=Drosophila melanogaster, GI281362636, Length=293, Percent_Identity=31.3993174061433, Blast_Score=164, Evalue=9e-41, Organism=Drosophila melanogaster, GI21356391, Length=227, Percent_Identity=26.8722466960352, Blast_Score=86, Evalue=4e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008257 [H]
Pfam domain/function: PF01244 Peptidase_M19 [H]
EC number: NA
Molecular weight: Translated: 35594; Mature: 35594
Theoretical pI: Translated: 8.57; Mature: 8.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIIDLHCDTISKLYKFSGRQGLRSNELHVDLEKLRQAGSKAQFFALFLDKNNLPAGTDS CEEEEECHHHHHHHHHHCCCCCCCCCCCEEEHHHHHCCCCCCEEEEEEEECCCCCCCCHH YQIFLEMLDVFKKELAKNSDMVSLARNYSELQKNESEGKISAFLTIEEGAVLQGKLSNLK HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEHHHHHHHH KIYRLGVRLITLTWNYPNEIGFPNMKNYKDKGLTPFGNEVIREMNHLGMIIDVSHLSDKG HHHHCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEEECCCCCCC FYDVINLSRKPVIASHSNARSLHNHPRNLTDDMIKLIGEQGGVIGINFNSYFLGDTKIST CHHHHCCCCCCEEECCCCCHHHHCCCCCHHHHHHHHHHCCCCEEEEECCCEEECCCHHHH IADIIKHIKHVKKVGGSDVIALGSDYDGISCQLELKNIGQIPNLIYTLEKYGFSDDDIDK HHHHHHHHHHHHHCCCCCEEEECCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCHHH FTYKNVERVIKDVLN HHHHHHHHHHHHHCC >Mature Secondary Structure MKIIDLHCDTISKLYKFSGRQGLRSNELHVDLEKLRQAGSKAQFFALFLDKNNLPAGTDS CEEEEECHHHHHHHHHHCCCCCCCCCCCEEEHHHHHCCCCCCEEEEEEEECCCCCCCCHH YQIFLEMLDVFKKELAKNSDMVSLARNYSELQKNESEGKISAFLTIEEGAVLQGKLSNLK HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEHHHHHHHH KIYRLGVRLITLTWNYPNEIGFPNMKNYKDKGLTPFGNEVIREMNHLGMIIDVSHLSDKG HHHHCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEEECCCCCCC FYDVINLSRKPVIASHSNARSLHNHPRNLTDDMIKLIGEQGGVIGINFNSYFLGDTKIST CHHHHCCCCCCEEECCCCCHHHHCCCCCHHHHHHHHHHCCCCEEEEECCCEEECCCHHHH IADIIKHIKHVKKVGGSDVIALGSDYDGISCQLELKNIGQIPNLIYTLEKYGFSDDDIDK HHHHHHHHHHHHHCCCCCEEEECCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCHHH FTYKNVERVIKDVLN HHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1313537 [H]