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The map label for this gene is fucU [C]

Identifier: 220931802

GI number: 220931802

Start: 1037398

End: 1037817

Strand: Direct

Name: fucU [C]

Synonym: Hore_09590

Alternate gene names: 220931802

Gene position: 1037398-1037817 (Clockwise)

Preceding gene: 220931801

Following gene: 220931803

Centisome position: 40.24

GC content: 31.9

Gene sequence:

>420_bases
ATGGTAAAGGGTGGGTTGATTCATCCACATATATTAGAAAGTGTTGCAGCTGCTGGACATGGTGCACAAATATTAATAAC
TGATGGAAATTATCCAGCTTCTACTAAAACAAAAGAAGATGTAAACAAAGTATATTTAAATCTTGCTCCGGGGTTAGTTA
ATGTTACTGATGTACTTAAAGTTTTAGTTGAAGTTATTAATATAGAAGAGGCTACGGTAATGGCACCATCAAAAGGAGAC
AAGCCAGCTATATTTAAGGAATTTAAAAGAATATTAAGTTCTGGAACAGATTTTAATGAAATTGGACGTTTTGAATTTTA
CGACAAATGTGTATCTAATCAAGATCTATGCTTAGTCATTGTTACAGGGGAACAGAGAATATATGCCAATATATTATTGA
CAATTGGTGTAGTAAAATAA

Upstream 100 bases:

>100_bases
GTGCAGTATAAAACAGCTTATATGAACTTGAAAAGTAATATGGAAGTTTTATCTCAATTAGGATGAAATTTCAGATAAAT
AGGACCAAGGAGGTCATCAT

Downstream 100 bases:

>100_bases
TTTATAATATTTAAGAAAATACCTGGCCTGGTATGTATTTAGGGCCAGGTATTAAAGTTCTGATTATTACTGAAGTATCT
TAATGAAAAATTTTAAGGAA

Product: RbsD or FucU transport

Products: NA

Alternate protein names: Fuscose Operon Protein FucU

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MVKGGLIHPHILESVAAAGHGAQILITDGNYPASTKTKEDVNKVYLNLAPGLVNVTDVLKVLVEVINIEEATVMAPSKGD
KPAIFKEFKRILSSGTDFNEIGRFEFYDKCVSNQDLCLVIVTGEQRIYANILLTIGVVK

Sequences:

>Translated_139_residues
MVKGGLIHPHILESVAAAGHGAQILITDGNYPASTKTKEDVNKVYLNLAPGLVNVTDVLKVLVEVINIEEATVMAPSKGD
KPAIFKEFKRILSSGTDFNEIGRFEFYDKCVSNQDLCLVIVTGEQRIYANILLTIGVVK
>Mature_139_residues
MVKGGLIHPHILESVAAAGHGAQILITDGNYPASTKTKEDVNKVYLNLAPGLVNVTDVLKVLVEVINIEEATVMAPSKGD
KPAIFKEFKRILSSGTDFNEIGRFEFYDKCVSNQDLCLVIVTGEQRIYANILLTIGVVK

Specific function: Unknown

COG id: COG4154

COG function: function code G; Fucose dissimilation pathway protein FucU

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789169, Length=141, Percent_Identity=29.7872340425532, Blast_Score=61, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15114; Mature: 15114

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKGGLIHPHILESVAAAGHGAQILITDGNYPASTKTKEDVNKVYLNLAPGLVNVTDVLK
CCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHEEEEECCCEECHHHHHH
VLVEVINIEEATVMAPSKGDKPAIFKEFKRILSSGTDFNEIGRFEFYDKCVSNQDLCLVI
HHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHCCCCHHHHCCHHHHHHHCCCCCEEEEE
VTGEQRIYANILLTIGVVK
EECCCEEEEEEEEEEEECC
>Mature Secondary Structure
MVKGGLIHPHILESVAAAGHGAQILITDGNYPASTKTKEDVNKVYLNLAPGLVNVTDVLK
CCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHEEEEECCCEECHHHHHH
VLVEVINIEEATVMAPSKGDKPAIFKEFKRILSSGTDFNEIGRFEFYDKCVSNQDLCLVI
HHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHCCCCHHHHCCHHHHHHHCCCCCEEEEE
VTGEQRIYANILLTIGVVK
EECCCEEEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA