| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is yteA [H]
Identifier: 220931773
GI number: 220931773
Start: 1002906
End: 1003592
Strand: Direct
Name: yteA [H]
Synonym: Hore_09300
Alternate gene names: 220931773
Gene position: 1002906-1003592 (Clockwise)
Preceding gene: 220931772
Following gene: 220931774
Centisome position: 38.9
GC content: 41.19
Gene sequence:
>687_bases ATGGATAGGACAAAAGAGAAAAAATACCGTCAATTATTAATAAATGAAAAAAATAGTTTATTACATGAGCTAAAACATTT TTCTGATGACGAGTTTGCCAGTGTTAAGGACTCAACCGGAGAATTATCCAGTTACGATAATCATCCAGCCGATCAGGGAA GTAATACCTATGACCGGGAGAAAGACAGAGGTTTAAGGGATAATGCACAGGTATTATTAAATAAAGTCGAAAACGCCCTT AACAGGCTAGAAGAAGGTAATTATGGATTGTGTGAAAAATGTGGCCAGGAGATAAGGGAGGAAAGACTGGAAACCATTCC TTACGCAACCCTGTGTGAGCGTTGTCAGGCGAAAGAGGAAGGGAAGGATTATAACAGGGACCGCCCCCTTGAAGAAGAAA ATTTGACTCCTCCCTTTGGTAGAGGGTTCTATGACGAGACAAATTATAATGCCTATGATGCTGAGGATACCTGGCAGGAT GTGGCCCAGTATGGAACTTCCAATACACCCCAGGATGTCCCTGAAGAGACTTCAGGGACGGGGGCAGAGGCTTATATTGA TTCAGAAGAGACTGTTGGGTCAGTTGGATTTGAAGATAGTATCATTGATGATGAAGCAGATAATTTAGAAGAGGCATCTG AAAAAGAGAGTACTTTTACCGGGGAAAAAGGAAAGGATAAAAAATAG
Upstream 100 bases:
>100_bases TAAAAGTTTATAATTAAGTTCCCGTTAAAATTCCAATATTATATATTTTACTCATTACATTTTCTTCAATATTAAATTGA TTCAGGAAAGAGGTAATAGA
Downstream 100 bases:
>100_bases ATAATATAACGGTATAGCTTCTGGTTATACCGTTATTTATTTGTAATTAAATACAAATGTAAGTGGGGAGGTTTTTAATT TATTTTGAAGAATATTTTAT
Product: TraR/DksA family transcriptional regulator
Products: NA
Alternate protein names: ORFQ [H]
Number of amino acids: Translated: 228; Mature: 228
Protein sequence:
>228_residues MDRTKEKKYRQLLINEKNSLLHELKHFSDDEFASVKDSTGELSSYDNHPADQGSNTYDREKDRGLRDNAQVLLNKVENAL NRLEEGNYGLCEKCGQEIREERLETIPYATLCERCQAKEEGKDYNRDRPLEEENLTPPFGRGFYDETNYNAYDAEDTWQD VAQYGTSNTPQDVPEETSGTGAEAYIDSEETVGSVGFEDSIIDDEADNLEEASEKESTFTGEKGKDKK
Sequences:
>Translated_228_residues MDRTKEKKYRQLLINEKNSLLHELKHFSDDEFASVKDSTGELSSYDNHPADQGSNTYDREKDRGLRDNAQVLLNKVENAL NRLEEGNYGLCEKCGQEIREERLETIPYATLCERCQAKEEGKDYNRDRPLEEENLTPPFGRGFYDETNYNAYDAEDTWQD VAQYGTSNTPQDVPEETSGTGAEAYIDSEETVGSVGFEDSIIDDEADNLEEASEKESTFTGEKGKDKK >Mature_228_residues MDRTKEKKYRQLLINEKNSLLHELKHFSDDEFASVKDSTGELSSYDNHPADQGSNTYDREKDRGLRDNAQVLLNKVENAL NRLEEGNYGLCEKCGQEIREERLETIPYATLCERCQAKEEGKDYNRDRPLEEENLTPPFGRGFYDETNYNAYDAEDTWQD VAQYGTSNTPQDVPEETSGTGAEAYIDSEETVGSVGFEDSIIDDEADNLEEASEKESTFTGEKGKDKK
Specific function: Dosage-Dependent Suppressor Of A Dnak Deletion Mutation. It Suppressed Not Only The Temperature-Sensitive Growth But Also The Filamentous Phenotype Of The Dnak Deletion Strain, While The Defect Of Lambda Growth Is Not Suppressed. [C]
COG id: COG1734
COG function: function code T; DnaK suppressor protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 dksA C4-type zinc finger [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014240 - InterPro: IPR000962 [H]
Pfam domain/function: PF01258 zf-dskA_traR [H]
EC number: NA
Molecular weight: Translated: 25970; Mature: 25970
Theoretical pI: Translated: 4.12; Mature: 4.12
Prosite motif: PS01102 ZF_DKSA_1 ; PS51128 ZF_DKSA_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRTKEKKYRQLLINEKNSLLHELKHFSDDEFASVKDSTGELSSYDNHPADQGSNTYDRE CCCHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHCCCCCCHHCCCCCCCCCCCCCCCHH KDRGLRDNAQVLLNKVENALNRLEEGNYGLCEKCGQEIREERLETIPYATLCERCQAKEE HHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH GKDYNRDRPLEEENLTPPFGRGFYDETNYNAYDAEDTWQDVAQYGTSNTPQDVPEETSGT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCC GAEAYIDSEETVGSVGFEDSIIDDEADNLEEASEKESTFTGEKGKDKK CCCEEECCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MDRTKEKKYRQLLINEKNSLLHELKHFSDDEFASVKDSTGELSSYDNHPADQGSNTYDRE CCCHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHCCCCCCHHCCCCCCCCCCCCCCCHH KDRGLRDNAQVLLNKVENALNRLEEGNYGLCEKCGQEIREERLETIPYATLCERCQAKEE HHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH GKDYNRDRPLEEENLTPPFGRGFYDETNYNAYDAEDTWQDVAQYGTSNTPQDVPEETSGT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCC GAEAYIDSEETVGSVGFEDSIIDDEADNLEEASEKESTFTGEKGKDKK CCCEEECCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9387221; 9384377; 10568751 [H]