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The map label for this gene is yvoD [H]

Identifier: 220931672

GI number: 220931672

Start: 894147

End: 894605

Strand: Direct

Name: yvoD [H]

Synonym: Hore_08280

Alternate gene names: 220931672

Gene position: 894147-894605 (Clockwise)

Preceding gene: 220931671

Following gene: 220931674

Centisome position: 34.68

GC content: 31.59

Gene sequence:

>459_bases
ATGGACTGGAATGGATTTATAAACGAAGCAGTTACCGGTAGTGTCGATATGGTTATAAAAATAGTAATGATAATCTTTCC
CCTTTTTATTGGAATTGAAATAATAGAAGAAGCCGGTATTATTAAAAAGATATCTAAAGTATTTAAAAGCACTTTAAAAC
ATTTTGAGCTTCCAGAGACTGCCAGTTTACCGATTATTGTCGGTCAGTCTTTTGGGTTGTTGTATGGAGCCGGGTTAATA
TTAAGGTATGTTGATGATAATAATTTTACCTATAAGGAAGTTACCACCATTTCTGTTTTATTTGCTGTCTGTCATGCTGT
CTTTGAGGATACCTTATTATTTGTAGCTATTGGTGGTAATGGATTTATTATACTTGGAATGAGAATCTTACTGGCTCTTG
GTGTTACCTATTTATATGGAAAAATAAAAAAGCAAACAAAACAGGTTTATTATATTTAA

Upstream 100 bases:

>100_bases
TTTAAGATTAAGTCTCTCTTTATTAAGTGGGGTTATATTAAACATTATACTTTAAAAAATAGTCTAAATATAAATGAGAT
ACAAAATCAGGGGGATAGTT

Downstream 100 bases:

>100_bases
TTTAAAACAGATTAAATTAACTGTTTTTTTAGTTTCTCCATGTCTACTGGGAGGGGAGCCTTAAAAGTTACTTCTTTGTG
TTTAAAAGGTAGACAGCAGG

Product: nucleoside recognition domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MDWNGFINEAVTGSVDMVIKIVMIIFPLFIGIEIIEEAGIIKKISKVFKSTLKHFELPETASLPIIVGQSFGLLYGAGLI
LRYVDDNNFTYKEVTTISVLFAVCHAVFEDTLLFVAIGGNGFIILGMRILLALGVTYLYGKIKKQTKQVYYI

Sequences:

>Translated_152_residues
MDWNGFINEAVTGSVDMVIKIVMIIFPLFIGIEIIEEAGIIKKISKVFKSTLKHFELPETASLPIIVGQSFGLLYGAGLI
LRYVDDNNFTYKEVTTISVLFAVCHAVFEDTLLFVAIGGNGFIILGMRILLALGVTYLYGKIKKQTKQVYYI
>Mature_152_residues
MDWNGFINEAVTGSVDMVIKIVMIIFPLFIGIEIIEEAGIIKKISKVFKSTLKHFELPETASLPIIVGQSFGLLYGAGLI
LRYVDDNNFTYKEVTTISVLFAVCHAVFEDTLLFVAIGGNGFIILGMRILLALGVTYLYGKIKKQTKQVYYI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011642 [H]

Pfam domain/function: PF07670 Gate [H]

EC number: NA

Molecular weight: Translated: 16932; Mature: 16932

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDWNGFINEAVTGSVDMVIKIVMIIFPLFIGIEIIEEAGIIKKISKVFKSTLKHFELPET
CCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCC
ASLPIIVGQSFGLLYGAGLILRYVDDNNFTYKEVTTISVLFAVCHAVFEDTLLFVAIGGN
CCCCEEECCCHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCC
GFIILGMRILLALGVTYLYGKIKKQTKQVYYI
CEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDWNGFINEAVTGSVDMVIKIVMIIFPLFIGIEIIEEAGIIKKISKVFKSTLKHFELPET
CCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCC
ASLPIIVGQSFGLLYGAGLILRYVDDNNFTYKEVTTISVLFAVCHAVFEDTLLFVAIGGN
CCCCEEECCCHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCC
GFIILGMRILLALGVTYLYGKIKKQTKQVYYI
CEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]