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The map label for this gene is yvoD [H]

Identifier: 220931671

GI number: 220931671

Start: 893688

End: 894101

Strand: Direct

Name: yvoD [H]

Synonym: Hore_08270

Alternate gene names: 220931671

Gene position: 893688-894101 (Clockwise)

Preceding gene: 220931669

Following gene: 220931672

Centisome position: 34.66

GC content: 31.4

Gene sequence:

>414_bases
TTGAAACAGGTAGTTAAATCAGGATTTTTAAAAGCCCGGGATGTGTTTATTGATCTAATAAAAATAATTATTCCAGTATA
TGTTTTGGTTACATTTTTAAAATATACAGGTTTTATTGATTTGGTGGCAGGTATATTTAGTCCGATGATGCAGGTAGTGG
GACTACCAGGGGAAGCAGTTGTTGCTCTTCTTACTGCATATCTTCTTAATATTTATGGTGGAATTGCTGTAATATCTGGC
CTGGAATTAGGACCCAGGGAAATAACTATTCTGGGAACGATGATAGGTATTGCCCATAGTCTTATAATTGAATCAGCTAT
TTTTAAAAAACTAAAGATAAACCTATTTTTGATTAATGTTTTAAGATTAAGTCTCTCTTTATTAAGTGGGGTTATATTAA
ACATTATACTTTAA

Upstream 100 bases:

>100_bases
ACATTATTACAAAGGGATAGAAGGTAACTTTAATATAAGGGTAAATCATTTAATATAAGAAATCATAAAATATAGGTTTA
AGTAACGGAGGTAGTCTTAA

Downstream 100 bases:

>100_bases
AAAATAGTCTAAATATAAATGAGATACAAAATCAGGGGGATAGTTATGGACTGGAATGGATTTATAAACGAAGCAGTTAC
CGGTAGTGTCGATATGGTTA

Product: nucleoside recognition domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MKQVVKSGFLKARDVFIDLIKIIIPVYVLVTFLKYTGFIDLVAGIFSPMMQVVGLPGEAVVALLTAYLLNIYGGIAVISG
LELGPREITILGTMIGIAHSLIIESAIFKKLKINLFLINVLRLSLSLLSGVILNIIL

Sequences:

>Translated_137_residues
MKQVVKSGFLKARDVFIDLIKIIIPVYVLVTFLKYTGFIDLVAGIFSPMMQVVGLPGEAVVALLTAYLLNIYGGIAVISG
LELGPREITILGTMIGIAHSLIIESAIFKKLKINLFLINVLRLSLSLLSGVILNIIL
>Mature_137_residues
MKQVVKSGFLKARDVFIDLIKIIIPVYVLVTFLKYTGFIDLVAGIFSPMMQVVGLPGEAVVALLTAYLLNIYGGIAVISG
LELGPREITILGTMIGIAHSLIIESAIFKKLKINLFLINVLRLSLSLLSGVILNIIL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011642 [H]

Pfam domain/function: PF07670 Gate [H]

EC number: NA

Molecular weight: Translated: 14869; Mature: 14869

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQVVKSGFLKARDVFIDLIKIIIPVYVLVTFLKYTGFIDLVAGIFSPMMQVVGLPGEAV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
VALLTAYLLNIYGGIAVISGLELGPREITILGTMIGIAHSLIIESAIFKKLKINLFLINV
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRLSLSLLSGVILNIIL
HHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKQVVKSGFLKARDVFIDLIKIIIPVYVLVTFLKYTGFIDLVAGIFSPMMQVVGLPGEAV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
VALLTAYLLNIYGGIAVISGLELGPREITILGTMIGIAHSLIIESAIFKKLKINLFLINV
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRLSLSLLSGVILNIIL
HHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]