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The map label for this gene is rbgA [H]

Identifier: 220931580

GI number: 220931580

Start: 793616

End: 794464

Strand: Direct

Name: rbgA [H]

Synonym: Hore_07360

Alternate gene names: 220931580

Gene position: 793616-794464 (Clockwise)

Preceding gene: 220931579

Following gene: 220931581

Centisome position: 30.78

GC content: 40.05

Gene sequence:

>849_bases
TTGGTTCAATGGTATCCCAGTCATATGGCCAGGGCCAGAAAGGTATTAATAGAAAATCTAAAACTGGTTGATATTGTGGT
AGAAGTACTTGATGCCAGAATTCCGGCCAGCAGTAAAAATCCCGATATTGATTCTATACTGGATAACAAAAAGCGGGTCA
TAGTATTAAATAAAATTGACCTGGCTCATCCTGATTTGACCTCAACCTGGCTTGACTATTTCCGGAGAAGTTACCCGGTG
ATGGGGGTTAATTCTATCACCGGTGAGGGTATTGGAGAATTAAAGAGGCTTCTGAGAAATGAAGGGGAGAGGATTAATAA
AGTTCTTGAAGAAAAAGGGAGACAGCAGAGACCGGTAAGAATAATGGTAATTGGAATACCCAATGTTGGTAAATCTGCCT
TTCTTAATATTCTGGCCGGTTCTAACCGGGTTAAAACCGGTAACAGGCCAGGGGTAACCCGGGGAAAACAATGGTTGAAA
CTCGGGAAGGGTGTTCAGTTACTTGATACTCCCGGTATACTGTGGCCAAAAATTGAAGATGAAGAGACAGGTCATAAACT
CGCTATTACCGGGGCTATTGATGAAAATAACTATGATAAAGAAACAGCAGCATATAAGCTTGTTTGTTACCTTATGGATA
TAGATTCTGAAATACTGGAAAAGACTTATAATATAGGAATTTATGAAGGATTACACCCCTATGACATTGTTGAATTGATT
GGGAAGCAGCGTGGTTGTTACATGAGTGGCGGTAAGATTGATAGACACAAAACCAGTGAGATTATTTTAAATGATTTCAG
ACGTGGTAAGATGGGTCGAATTACCCTTGAAAAACCGGAGTTGATATAG

Upstream 100 bases:

>100_bases
AAAGGAAAGGCTGCCAGGATAAAAGAAAAAAGAGATTAAGTTTAAGGGGTGGGGAGTTTTTCCTGACCCCCTTTTATTTT
ATCAAACAGGAGTGGTCAAA

Downstream 100 bases:

>100_bases
GTGGATTTTAGTGAGTTAACAATTAAGGAAATTGATTTATACCTCAAAAAGGTTAAGGTTGATGATAACATAATTAAAAA
GCTTGAAGAAGATCCCCGAA

Product: HSR1-like GTP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MVQWYPSHMARARKVLIENLKLVDIVVEVLDARIPASSKNPDIDSILDNKKRVIVLNKIDLAHPDLTSTWLDYFRRSYPV
MGVNSITGEGIGELKRLLRNEGERINKVLEEKGRQQRPVRIMVIGIPNVGKSAFLNILAGSNRVKTGNRPGVTRGKQWLK
LGKGVQLLDTPGILWPKIEDEETGHKLAITGAIDENNYDKETAAYKLVCYLMDIDSEILEKTYNIGIYEGLHPYDIVELI
GKQRGCYMSGGKIDRHKTSEIILNDFRRGKMGRITLEKPELI

Sequences:

>Translated_282_residues
MVQWYPSHMARARKVLIENLKLVDIVVEVLDARIPASSKNPDIDSILDNKKRVIVLNKIDLAHPDLTSTWLDYFRRSYPV
MGVNSITGEGIGELKRLLRNEGERINKVLEEKGRQQRPVRIMVIGIPNVGKSAFLNILAGSNRVKTGNRPGVTRGKQWLK
LGKGVQLLDTPGILWPKIEDEETGHKLAITGAIDENNYDKETAAYKLVCYLMDIDSEILEKTYNIGIYEGLHPYDIVELI
GKQRGCYMSGGKIDRHKTSEIILNDFRRGKMGRITLEKPELI
>Mature_282_residues
MVQWYPSHMARARKVLIENLKLVDIVVEVLDARIPASSKNPDIDSILDNKKRVIVLNKIDLAHPDLTSTWLDYFRRSYPV
MGVNSITGEGIGELKRLLRNEGERINKVLEEKGRQQRPVRIMVIGIPNVGKSAFLNILAGSNRVKTGNRPGVTRGKQWLK
LGKGVQLLDTPGILWPKIEDEETGHKLAITGAIDENNYDKETAAYKLVCYLMDIDSEILEKTYNIGIYEGLHPYDIVELI
GKQRGCYMSGGKIDRHKTSEIILNDFRRGKMGRITLEKPELI

Specific function: Binds GTP and GDP [H]

COG id: COG1161

COG function: function code R; Predicted GTPases

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]

Homologues:

Organism=Homo sapiens, GI93277113, Length=223, Percent_Identity=37.6681614349776, Blast_Score=115, Evalue=5e-26,
Organism=Homo sapiens, GI7019419, Length=254, Percent_Identity=29.5275590551181, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI296317324, Length=173, Percent_Identity=34.1040462427746, Blast_Score=91, Evalue=1e-18,
Organism=Homo sapiens, GI9506611, Length=173, Percent_Identity=34.1040462427746, Blast_Score=91, Evalue=1e-18,
Organism=Homo sapiens, GI45643129, Length=185, Percent_Identity=29.1891891891892, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI45643127, Length=185, Percent_Identity=29.1891891891892, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI45593130, Length=185, Percent_Identity=29.1891891891892, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI223029424, Length=160, Percent_Identity=28.125, Blast_Score=67, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17534827, Length=270, Percent_Identity=28.5185185185185, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI25143545, Length=276, Percent_Identity=25, Blast_Score=84, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI115535155, Length=272, Percent_Identity=25, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI193211047, Length=212, Percent_Identity=32.0754716981132, Blast_Score=81, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI32563985, Length=247, Percent_Identity=28.3400809716599, Blast_Score=75, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI71990926, Length=247, Percent_Identity=28.3400809716599, Blast_Score=74, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI32563983, Length=247, Percent_Identity=28.3400809716599, Blast_Score=74, Evalue=8e-14,
Organism=Caenorhabditis elegans, GI71982363, Length=177, Percent_Identity=29.3785310734463, Blast_Score=74, Evalue=1e-13,
Organism=Saccharomyces cerevisiae, GI6324381, Length=254, Percent_Identity=27.9527559055118, Blast_Score=92, Evalue=7e-20,
Organism=Saccharomyces cerevisiae, GI6320842, Length=298, Percent_Identity=26.8456375838926, Blast_Score=87, Evalue=3e-18,
Organism=Drosophila melanogaster, GI85815858, Length=323, Percent_Identity=26.3157894736842, Blast_Score=102, Evalue=3e-22,
Organism=Drosophila melanogaster, GI28572990, Length=306, Percent_Identity=27.1241830065359, Blast_Score=91, Evalue=1e-18,
Organism=Drosophila melanogaster, GI19922460, Length=256, Percent_Identity=27.34375, Blast_Score=83, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023179
- InterPro:   IPR019991
- InterPro:   IPR016478
- InterPro:   IPR002917 [H]

Pfam domain/function: PF01926 MMR_HSR1 [H]

EC number: NA

Molecular weight: Translated: 31945; Mature: 31945

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVQWYPSHMARARKVLIENLKLVDIVVEVLDARIPASSKNPDIDSILDNKKRVIVLNKID
CCEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCEEEEEEECC
LAHPDLTSTWLDYFRRSYPVMGVNSITGEGIGELKRLLRNEGERINKVLEEKGRQQRPVR
CCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCEE
IMVIGIPNVGKSAFLNILAGSNRVKTGNRPGVTRGKQWLKLGKGVQLLDTPGILWPKIED
EEEEECCCCCHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHCCCCEEEECCCCCCCCCCC
EETGHKLAITGAIDENNYDKETAAYKLVCYLMDIDSEILEKTYNIGIYEGLHPYDIVELI
CCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCEECCCCHHHHHHHH
GKQRGCYMSGGKIDRHKTSEIILNDFRRGKMGRITLEKPELI
HCCCCCEECCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCC
>Mature Secondary Structure
MVQWYPSHMARARKVLIENLKLVDIVVEVLDARIPASSKNPDIDSILDNKKRVIVLNKID
CCEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCEEEEEEECC
LAHPDLTSTWLDYFRRSYPVMGVNSITGEGIGELKRLLRNEGERINKVLEEKGRQQRPVR
CCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCEE
IMVIGIPNVGKSAFLNILAGSNRVKTGNRPGVTRGKQWLKLGKGVQLLDTPGILWPKIED
EEEEECCCCCHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHCCCCEEEECCCCCCCCCCC
EETGHKLAITGAIDENNYDKETAAYKLVCYLMDIDSEILEKTYNIGIYEGLHPYDIVELI
CCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCEECCCCHHHHHHHH
GKQRGCYMSGGKIDRHKTSEIILNDFRRGKMGRITLEKPELI
HCCCCCEECCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]