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The map label for this gene is 220931490

Identifier: 220931490

GI number: 220931490

Start: 700810

End: 701631

Strand: Direct

Name: 220931490

Synonym: Hore_06460

Alternate gene names: NA

Gene position: 700810-701631 (Clockwise)

Preceding gene: 220931489

Following gene: 220931491

Centisome position: 27.18

GC content: 39.78

Gene sequence:

>822_bases
ATGTATAAAATTATTAATAAAGAGGTACTGGCCCCCACTGTTAAGAAGATAGATGTAGAAGCTCCACTTATTGCCGGCAA
AACCAGACCGGGTAATTTTATTATGCTACGTATTAATGAAAACGGGGAGCGTATTCCTCTTACAGTAGCCGATTATGATA
GGGAAAAGGGGATAATAACAATAATATTTCAGGAAGTTGGTTATACAACCAGATTGCTCGGTCAACTTGAAAAAGGAGAT
TTTATTAAAGATATTGTCGGTCCCCTGGGCCAGCATATGGATATGGAAGGTTATGATAAGGTTGTCTGCCTCGGTGGGGG
TTCGGGTACTGCCCTTTTATACCCGAAGGTAAAGGGGTTTTATGAAAAAGGTGCTGAGGTTATTGCTATAACTGGAGCCA
GAACTAAAGAATTGCTTATTTTAGAGGAAGAACTGGCAAAAATAAGTCATAGACTATATATAGCTACTGATGATGGTAGT
AAGGGTCATCACGGTTTTGTTACAGATATACTGGCTGAAATATTGGAAGAAGAAGAAATTGATCTGGTTGTTGCCATTGG
ACCGGTCCCTATGATGAAGGCTGTGTCTGATATGACCAGACCCTATGGGGTAAAAACAATCGTCAGTTTAAATTCATTAA
TGGTAGATGGAACCGGTATGTGTGGTGGCTGTCGGGTTACAGTAGGTGGTGAAACAAAATTTACCTGTGTAGATGGACCA
GCCTTTGATGGTCACCAGGTTGATTTTGAGGAGTTAATGAATAGACTTAACTTTTATAACGAGGAAGAAAAAATGGTCAA
CAAAAAAGAGGTGAGTGACTGA

Upstream 100 bases:

>100_bases
TGATGAACCAAGTCCACCCTGTTAATATTTAAATAAGCAGGATATCTAAATTCATTTATCGAATTTAAAAAATAGCTTGA
GGAGAATTGGAGGGAGAATA

Downstream 100 bases:

>100_bases
TGCCAGTAGTCAGAAAACGGGTTCCAATGAAAAATCAACCTCCTGATGAAAGAATAAAAAATTTTAAAGAGGTTCCCCTT
GGTTATAATAAAAAAGAAGC

Product: sulfide dehydrogenase (flavoprotein) subunit SudB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MYKIINKEVLAPTVKKIDVEAPLIAGKTRPGNFIMLRINENGERIPLTVADYDREKGIITIIFQEVGYTTRLLGQLEKGD
FIKDIVGPLGQHMDMEGYDKVVCLGGGSGTALLYPKVKGFYEKGAEVIAITGARTKELLILEEELAKISHRLYIATDDGS
KGHHGFVTDILAEILEEEEIDLVVAIGPVPMMKAVSDMTRPYGVKTIVSLNSLMVDGTGMCGGCRVTVGGETKFTCVDGP
AFDGHQVDFEELMNRLNFYNEEEKMVNKKEVSD

Sequences:

>Translated_273_residues
MYKIINKEVLAPTVKKIDVEAPLIAGKTRPGNFIMLRINENGERIPLTVADYDREKGIITIIFQEVGYTTRLLGQLEKGD
FIKDIVGPLGQHMDMEGYDKVVCLGGGSGTALLYPKVKGFYEKGAEVIAITGARTKELLILEEELAKISHRLYIATDDGS
KGHHGFVTDILAEILEEEEIDLVVAIGPVPMMKAVSDMTRPYGVKTIVSLNSLMVDGTGMCGGCRVTVGGETKFTCVDGP
AFDGHQVDFEELMNRLNFYNEEEKMVNKKEVSD
>Mature_273_residues
MYKIINKEVLAPTVKKIDVEAPLIAGKTRPGNFIMLRINENGERIPLTVADYDREKGIITIIFQEVGYTTRLLGQLEKGD
FIKDIVGPLGQHMDMEGYDKVVCLGGGSGTALLYPKVKGFYEKGAEVIAITGARTKELLILEEELAKISHRLYIATDDGS
KGHHGFVTDILAEILEEEEIDLVVAIGPVPMMKAVSDMTRPYGVKTIVSLNSLMVDGTGMCGGCRVTVGGETKFTCVDGP
AFDGHQVDFEELMNRLNFYNEEEKMVNKKEVSD

Specific function: Unknown

COG id: COG0543

COG function: function code HC; 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding FR-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012165
- InterPro:   IPR019480
- InterPro:   IPR017927
- InterPro:   IPR008333
- InterPro:   IPR001433
- InterPro:   IPR017938 [H]

Pfam domain/function: PF10418 DHODB_Fe-S_bind; PF00970 FAD_binding_6; PF00175 NAD_binding_1 [H]

EC number: NA

Molecular weight: Translated: 30050; Mature: 30050

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKIINKEVLAPTVKKIDVEAPLIAGKTRPGNFIMLRINENGERIPLTVADYDREKGIIT
CCEECCHHHHCCHHHHEECCCCEEECCCCCCCEEEEEECCCCCEEEEEEECCCCCCCEEE
IIFQEVGYTTRLLGQLEKGDFIKDIVGPLGQHMDMEGYDKVVCLGGGSGTALLYPKVKGF
EEEEHHCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCEEEEHHHHHH
YEKGAEVIAITGARTKELLILEEELAKISHRLYIATDDGSKGHHGFVTDILAEILEEEEI
HHCCCEEEEEECCCCEEEEEEHHHHHHHHCEEEEEECCCCCCCCCHHHHHHHHHHCCCCC
DLVVAIGPVPMMKAVSDMTRPYGVKTIVSLNSLMVDGTGMCGGCRVTVGGETKFTCVDGP
EEEEEECCCHHHHHHHHHCCCCCCEEEEEECCEEECCCCCCCCCEEEECCCEEEEEECCC
AFDGHQVDFEELMNRLNFYNEEEKMVNKKEVSD
CCCCCCCCHHHHHHHHCCCCCHHHHHHHHCCCC
>Mature Secondary Structure
MYKIINKEVLAPTVKKIDVEAPLIAGKTRPGNFIMLRINENGERIPLTVADYDREKGIIT
CCEECCHHHHCCHHHHEECCCCEEECCCCCCCEEEEEECCCCCEEEEEEECCCCCCCEEE
IIFQEVGYTTRLLGQLEKGDFIKDIVGPLGQHMDMEGYDKVVCLGGGSGTALLYPKVKGF
EEEEHHCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCEEEEHHHHHH
YEKGAEVIAITGARTKELLILEEELAKISHRLYIATDDGSKGHHGFVTDILAEILEEEEI
HHCCCEEEEEECCCCEEEEEEHHHHHHHHCEEEEEECCCCCCCCCHHHHHHHHHHCCCCC
DLVVAIGPVPMMKAVSDMTRPYGVKTIVSLNSLMVDGTGMCGGCRVTVGGETKFTCVDGP
EEEEEECCCHHHHHHHHHCCCCCCEEEEEECCEEECCCCCCCCCEEEECCCEEEEEECCC
AFDGHQVDFEELMNRLNFYNEEEKMVNKKEVSD
CCCCCCCCHHHHHHHHCCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA