| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is yeiH [C]
Identifier: 220931390
GI number: 220931390
Start: 594412
End: 595392
Strand: Direct
Name: yeiH [C]
Synonym: Hore_05460
Alternate gene names: 220931390
Gene position: 594412-595392 (Clockwise)
Preceding gene: 220931388
Following gene: 220931391
Centisome position: 23.06
GC content: 34.66
Gene sequence:
>981_bases ATGAAAGCATTTAAAGAAAAAATTCCTGGAATATTGTTGGCTGTTTTCGTTGGAATAACCGGGAGATTGGTAGGCAATTT TGTACCAAATATAGGAGGAGTTACCATAGCAATTATCCTGGGTTTTCTGGCTGGGAACATTTTTCGTCTGGATAGCAACT ATGCTAAAGGTATTAAATTTGTGGAAAAGAAAATCCTGTCTCTTGCTATAATGTTGATGGGGTTAAAGTTGCAGATGGAT GTTTTGGCTGAACTTGGAATTTCCTCTATTGTAATAATAATTATCATGGTGACATTAACTGTCTTTGTAGGTTCTTTGAT TGGGAGGTTATGTGGTCTTTCAAATTCTTTCAGTATTTTACTGGGAATAGGAAATGGAATCTGTGGCTCTTCAGCTATTG CAGCAGCTGCTCCAATAGTTAGTAATAATGAAGAGGAGATCGGACTTTCTGTAAGTGTTGTTAATTTACTGGGTACATTT GGTATTTTCATTTTGCCAGTTATAACTGGTTTATTGAAATTAAATGAAACAACCAGTGGTTTGATGATTGGAAGTACTTT GCAGGCCACCGGTCAGGTAGTTGCTGCGGGTTTTTCTATAAGTGACTTAACAGGAGAAGTTGCTACTATAGTAAAAATGG CCAGGATACTAATGTTAGGACCTGTTGTCCTTTTGTTAAGCTTCTTATTTGGTAAAAAAGATAATAGTTTAGATAATAAT GTTAGTATTCCACCATTTATTATTGGATTTTTTATTTTTAGTATTATTGGTACTTTGCAAATATTACCTGTGGGTGTTGT ACAATCCTTAAAGTATACGGGTAAGTTGCTGTTAACTGTAGCCATGGCTGGTATTGGTTTAAGGATTAGAATTTCAAGTC TTATTAATCAGGGACCAAAGGCGTTGCTGGTGGGACTTCTTATATTTGTAGTTCAGCTCGTTTCTATTACTGGTTTAATA TATTTTTTTCTTTTAAAATAA
Upstream 100 bases:
>100_bases AAAGGTTATATATATTATAATAACATATTATTTTACTAATAAAAAATATACTATTACAATGTTTATATATAAATTAACTA TAATAGGAGATGGTGTATAA
Downstream 100 bases:
>100_bases ATTATATAAATTTACATTTCATTTGACTTTTTCTGACAAAGTATATAAAATATACTCTAAATCTAGGACGCCCAAGATGA CTCAGGAAGGAGGTGAACTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 326; Mature: 326
Protein sequence:
>326_residues MKAFKEKIPGILLAVFVGITGRLVGNFVPNIGGVTIAIILGFLAGNIFRLDSNYAKGIKFVEKKILSLAIMLMGLKLQMD VLAELGISSIVIIIIMVTLTVFVGSLIGRLCGLSNSFSILLGIGNGICGSSAIAAAAPIVSNNEEEIGLSVSVVNLLGTF GIFILPVITGLLKLNETTSGLMIGSTLQATGQVVAAGFSISDLTGEVATIVKMARILMLGPVVLLLSFLFGKKDNSLDNN VSIPPFIIGFFIFSIIGTLQILPVGVVQSLKYTGKLLLTVAMAGIGLRIRISSLINQGPKALLVGLLIFVVQLVSITGLI YFFLLK
Sequences:
>Translated_326_residues MKAFKEKIPGILLAVFVGITGRLVGNFVPNIGGVTIAIILGFLAGNIFRLDSNYAKGIKFVEKKILSLAIMLMGLKLQMD VLAELGISSIVIIIIMVTLTVFVGSLIGRLCGLSNSFSILLGIGNGICGSSAIAAAAPIVSNNEEEIGLSVSVVNLLGTF GIFILPVITGLLKLNETTSGLMIGSTLQATGQVVAAGFSISDLTGEVATIVKMARILMLGPVVLLLSFLFGKKDNSLDNN VSIPPFIIGFFIFSIIGTLQILPVGVVQSLKYTGKLLLTVAMAGIGLRIRISSLINQGPKALLVGLLIFVVQLVSITGLI YFFLLK >Mature_326_residues MKAFKEKIPGILLAVFVGITGRLVGNFVPNIGGVTIAIILGFLAGNIFRLDSNYAKGIKFVEKKILSLAIMLMGLKLQMD VLAELGISSIVIIIIMVTLTVFVGSLIGRLCGLSNSFSILLGIGNGICGSSAIAAAAPIVSNNEEEIGLSVSVVNLLGTF GIFILPVITGLLKLNETTSGLMIGSTLQATGQVVAAGFSISDLTGEVATIVKMARILMLGPVVLLLSFLFGKKDNSLDNN VSIPPFIIGFFIFSIIGTLQILPVGVVQSLKYTGKLLLTVAMAGIGLRIRISSLINQGPKALLVGLLIFVVQLVSITGLI YFFLLK
Specific function: Unknown
COG id: COG2855
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0324 family [H]
Homologues:
Organism=Escherichia coli, GI1788482, Length=322, Percent_Identity=32.9192546583851, Blast_Score=147, Evalue=1e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018383 [H]
Pfam domain/function: PF03601 Cons_hypoth698 [H]
EC number: NA
Molecular weight: Translated: 34237; Mature: 34237
Theoretical pI: Translated: 10.34; Mature: 10.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAFKEKIPGILLAVFVGITGRLVGNFVPNIGGVTIAIILGFLAGNIFRLDSNYAKGIKF CCCHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCEEEECCCHHHHHHH VEKKILSLAIMLMGLKLQMDVLAELGISSIVIIIIMVTLTVFVGSLIGRLCGLSNSFSIL HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE LGIGNGICGSSAIAAAAPIVSNNEEEIGLSVSVVNLLGTFGIFILPVITGLLKLNETTSG EECCCCCCCCHHHHHHCCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC LMIGSTLQATGQVVAAGFSISDLTGEVATIVKMARILMLGPVVLLLSFLFGKKDNSLDNN EEECCHHHHCCHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC VSIPPFIIGFFIFSIIGTLQILPVGVVQSLKYTGKLLLTVAMAGIGLRIRISSLINQGPK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHCCCHH ALLVGLLIFVVQLVSITGLIYFFLLK HHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKAFKEKIPGILLAVFVGITGRLVGNFVPNIGGVTIAIILGFLAGNIFRLDSNYAKGIKF CCCHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCEEEECCCHHHHHHH VEKKILSLAIMLMGLKLQMDVLAELGISSIVIIIIMVTLTVFVGSLIGRLCGLSNSFSIL HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE LGIGNGICGSSAIAAAAPIVSNNEEEIGLSVSVVNLLGTFGIFILPVITGLLKLNETTSG EECCCCCCCCHHHHHHCCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC LMIGSTLQATGQVVAAGFSISDLTGEVATIVKMARILMLGPVVLLLSFLFGKKDNSLDNN EEECCHHHHCCHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC VSIPPFIIGFFIFSIIGTLQILPVGVVQSLKYTGKLLLTVAMAGIGLRIRISSLINQGPK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHCCCHH ALLVGLLIFVVQLVSITGLIYFFLLK HHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12663927 [H]