| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is yfjI [C]
Identifier: 220931195
GI number: 220931195
Start: 361073
End: 363520
Strand: Direct
Name: yfjI [C]
Synonym: Hore_03470
Alternate gene names: 220931195
Gene position: 361073-363520 (Clockwise)
Preceding gene: 220931194
Following gene: 220931196
Centisome position: 14.01
GC content: 36.76
Gene sequence:
>2448_bases ATGACAGAAGAGAAAAAGTTGCAAAACTTTTTAGCGAAACTGGATAAAGTAAAAAAGAAAGGACCCGATCAATGGCAGGC CAGGTGTCCAGCCCATGAAGATAAGGTGGAAAGTCTGTCAGTCTCCAGGGGAGATAATAAGATAAATTTTCATTGTCATG CAGGTTGTTCAGGAAAAGATATTTTGAGAGCAATGGGTTTAAACTGGAGCGACATTTATTTTGATGATGAACCGGGCAAG AAGAAAAAATCAAAGGTTGTTAAGGAATACATTTACAGAGATGAGAATGGCCGGCCTCTTCATAAAACTTTAAGAACTGC AAATAAAGACTTCCTTCAGAAAAGATACGAAAACGGCAAGTGGAAGTGGGGATTAAAAGGAGTCAGAACTGTATTATATA AGCTAGAAGAGGTTAAAGAGGCGATTAATAATAATGATGTAGTTTACCTTGTTGAAGGCGAAAAAGACGCAGATAACTTG CATAAAATTGGATTAACCGGGACTTGTAATCCTTTAGGGGCAGGTAAATGGAAACCGGGATATACCGAAACACTCAAAGG GGCCCGGGTTGTTATTCTTCCAGATAACGATAAGCCAGGTAAGAAACACGCAAGGAACATCGCAAAAGAACTGCACGGAA AGGCAAAATTAGTTAAAATCCTAGAGCTGCCTGGATTAGACAAAAAAGAAGATGTTTCAGATTGGTTAGATAAAGGTGGA ACGAAGGAAAAGTTACTGCAATTAGTGAAAGATTGCCCGGAATGGAAGCCAGGTATTAATAATTGGCCCGATCCTCTTCC ATTTAATAATTTTGATGTAAAGCCTATTCCAGTAAATATATTACCTAACTGGTTAAGCGATTTTGCAATAAATTTAGCTG AATTTACTCAAACTCCCATTGATATGAGTATAATGTTAATTATTTCAGCATTAGGAACAGCCTTAGCTAATAAAGGAGTA GTCCAGATTAGAAAAGGATATACAGAGCCGTTAAATATCTGGACATGCACGGTGCTCCCGGCAGGGAATAGAAAAAGCCC TGTATTTAAGAAAATAATGAAACCTATTTTGGATTATGAGGAAAGAAAACGGGAAGAGATAGAGCCGGAACGCAGGCACG CATTAAAAGAAAAGTCAATACTGGAAGACCAGTTAAAACAAAAAGAAAAAATAGCTGGTAATGCTAAAGACCAGGCTAAA AGAAAACAGATAATGCAAGAAATCTTTAATCTTGATGATGAAATACAGGAAATGGAGATCCCGACATTACCCAGGTTAGT TGCAAGTGATGTTACTACCGAAAAATTAGCAAAGTTGATGGAAGACAATAATGGCCGGATTGCAATATTAAGTCCAGAAG GAGATATATTTAAGTTAATGGCCGGCAGGTATAGTAAAAACGGTGCAGCAAATTTTGATAATTATAAAAAGGCCTGGACA GGTGGAGAACCTATCAGAGATGACCGCATGGCCCGTAAAGGTACTTATGTTAAAAACCCTGCATTAACGCAAGGATTAAC AGTCCAGCCTGTTATATTAGAAGATTTGAAGGAGAAAAAAGCCTTTAAGGGTGAAGGTATTTTGGGAAGGTTTTTATATG CTATCCCTGAAAGCCCGGTTGGTAGCAGAAAAGTAGGAAATGAAGTCCCTGAATTATCTGATATAGCCGTTATGAGATAT CAAAAAGGATTATCAGCATTACTTCATACAAGGCCAGCGGGAGAAAATAAAAACGGGGAATGGGAGCCGCATATTATTAA ACTAAGCCCAGAGGCTTTAGAGGTTAGATATGAATTTGAAAGAGATATCGAAAAGGAATTAGGCCCAGAAGGGAAACTCC ATAATATTGCTGATTGGGGAAGCAAACTTGTAGGAAATATAACTAGAGTGGCTGGATTGCTTCATATAGCCGGCCAGACA GACGCACAAAAAGGCCAGGCAACCAGGGATATATGGAATAAACCCATTGGCCCTGAAACTATGAAAAAGGCAGTTAAATT AGGATACTCCCTTATTGAGCATGCATTAAAAGTATATGATTTACTGGATACAGATCCAGAAATAGAATTAGCCCGATATG TATTAAAAAGAATAATGAGGGGTAAGGAAATGGAAAAGGCAGAGGAATTACCTAAAGACAAAGATACATTAGATAAATCA ATCCTTATGGAATTATGTAAAGGCAAAAAAGAAATAAAAAGGCCAGATGATTTAAAGGAACCATTAAAATTATTAGCAGA ACTTAATTATATTACAATAGTGGAAAGAGAAACAGAGGGAAGAGGCAGAAACCCTTCTCCATTAATAAAATTAAACCCTA AAGTACATTCGATAAATTCGATAAAAAAAGATACTGAATATAATAAATCGAATAAATCGAATAAATCGAATATAACTCCA GAAATAAAAAAAGATGAAAATGGAGTTATAATCGAAGGGATGATATAA
Upstream 100 bases:
>100_bases ATCAGCAGCTATAAAACATTAACTCCAGATGAGCAAAAACTTTATGAGAAAGCATTCTGGGAAGCGGTTAAATTCTTGAA GGATCGGGAGGCAGAACAAC
Downstream 100 bases:
>100_bases AATGACTGGATATGAAATTATAAACGAATCAGAGAAGATTGGCTATAAATTAGAATTAAGGCCCGGTCCTAAGATTGGTT TATCATTAAAGCCGGGTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 815; Mature: 814
Protein sequence:
>815_residues MTEEKKLQNFLAKLDKVKKKGPDQWQARCPAHEDKVESLSVSRGDNKINFHCHAGCSGKDILRAMGLNWSDIYFDDEPGK KKKSKVVKEYIYRDENGRPLHKTLRTANKDFLQKRYENGKWKWGLKGVRTVLYKLEEVKEAINNNDVVYLVEGEKDADNL HKIGLTGTCNPLGAGKWKPGYTETLKGARVVILPDNDKPGKKHARNIAKELHGKAKLVKILELPGLDKKEDVSDWLDKGG TKEKLLQLVKDCPEWKPGINNWPDPLPFNNFDVKPIPVNILPNWLSDFAINLAEFTQTPIDMSIMLIISALGTALANKGV VQIRKGYTEPLNIWTCTVLPAGNRKSPVFKKIMKPILDYEERKREEIEPERRHALKEKSILEDQLKQKEKIAGNAKDQAK RKQIMQEIFNLDDEIQEMEIPTLPRLVASDVTTEKLAKLMEDNNGRIAILSPEGDIFKLMAGRYSKNGAANFDNYKKAWT GGEPIRDDRMARKGTYVKNPALTQGLTVQPVILEDLKEKKAFKGEGILGRFLYAIPESPVGSRKVGNEVPELSDIAVMRY QKGLSALLHTRPAGENKNGEWEPHIIKLSPEALEVRYEFERDIEKELGPEGKLHNIADWGSKLVGNITRVAGLLHIAGQT DAQKGQATRDIWNKPIGPETMKKAVKLGYSLIEHALKVYDLLDTDPEIELARYVLKRIMRGKEMEKAEELPKDKDTLDKS ILMELCKGKKEIKRPDDLKEPLKLLAELNYITIVERETEGRGRNPSPLIKLNPKVHSINSIKKDTEYNKSNKSNKSNITP EIKKDENGVIIEGMI
Sequences:
>Translated_815_residues MTEEKKLQNFLAKLDKVKKKGPDQWQARCPAHEDKVESLSVSRGDNKINFHCHAGCSGKDILRAMGLNWSDIYFDDEPGK KKKSKVVKEYIYRDENGRPLHKTLRTANKDFLQKRYENGKWKWGLKGVRTVLYKLEEVKEAINNNDVVYLVEGEKDADNL HKIGLTGTCNPLGAGKWKPGYTETLKGARVVILPDNDKPGKKHARNIAKELHGKAKLVKILELPGLDKKEDVSDWLDKGG TKEKLLQLVKDCPEWKPGINNWPDPLPFNNFDVKPIPVNILPNWLSDFAINLAEFTQTPIDMSIMLIISALGTALANKGV VQIRKGYTEPLNIWTCTVLPAGNRKSPVFKKIMKPILDYEERKREEIEPERRHALKEKSILEDQLKQKEKIAGNAKDQAK RKQIMQEIFNLDDEIQEMEIPTLPRLVASDVTTEKLAKLMEDNNGRIAILSPEGDIFKLMAGRYSKNGAANFDNYKKAWT GGEPIRDDRMARKGTYVKNPALTQGLTVQPVILEDLKEKKAFKGEGILGRFLYAIPESPVGSRKVGNEVPELSDIAVMRY QKGLSALLHTRPAGENKNGEWEPHIIKLSPEALEVRYEFERDIEKELGPEGKLHNIADWGSKLVGNITRVAGLLHIAGQT DAQKGQATRDIWNKPIGPETMKKAVKLGYSLIEHALKVYDLLDTDPEIELARYVLKRIMRGKEMEKAEELPKDKDTLDKS ILMELCKGKKEIKRPDDLKEPLKLLAELNYITIVERETEGRGRNPSPLIKLNPKVHSINSIKKDTEYNKSNKSNKSNITP EIKKDENGVIIEGMI >Mature_814_residues TEEKKLQNFLAKLDKVKKKGPDQWQARCPAHEDKVESLSVSRGDNKINFHCHAGCSGKDILRAMGLNWSDIYFDDEPGKK KKSKVVKEYIYRDENGRPLHKTLRTANKDFLQKRYENGKWKWGLKGVRTVLYKLEEVKEAINNNDVVYLVEGEKDADNLH KIGLTGTCNPLGAGKWKPGYTETLKGARVVILPDNDKPGKKHARNIAKELHGKAKLVKILELPGLDKKEDVSDWLDKGGT KEKLLQLVKDCPEWKPGINNWPDPLPFNNFDVKPIPVNILPNWLSDFAINLAEFTQTPIDMSIMLIISALGTALANKGVV QIRKGYTEPLNIWTCTVLPAGNRKSPVFKKIMKPILDYEERKREEIEPERRHALKEKSILEDQLKQKEKIAGNAKDQAKR KQIMQEIFNLDDEIQEMEIPTLPRLVASDVTTEKLAKLMEDNNGRIAILSPEGDIFKLMAGRYSKNGAANFDNYKKAWTG GEPIRDDRMARKGTYVKNPALTQGLTVQPVILEDLKEKKAFKGEGILGRFLYAIPESPVGSRKVGNEVPELSDIAVMRYQ KGLSALLHTRPAGENKNGEWEPHIIKLSPEALEVRYEFERDIEKELGPEGKLHNIADWGSKLVGNITRVAGLLHIAGQTD AQKGQATRDIWNKPIGPETMKKAVKLGYSLIEHALKVYDLLDTDPEIELARYVLKRIMRGKEMEKAEELPKDKDTLDKSI LMELCKGKKEIKRPDDLKEPLKLLAELNYITIVERETEGRGRNPSPLIKLNPKVHSINSIKKDTEYNKSNKSNKSNITPE IKKDENGVIIEGMI
Specific function: Unknown
COG id: COG5545
COG function: function code R; Predicted P-loop ATPase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788978, Length=372, Percent_Identity=23.6559139784946, Blast_Score=80, Evalue=6e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 92352; Mature: 92221
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEEKKLQNFLAKLDKVKKKGPDQWQARCPAHEDKVESLSVSRGDNKINFHCHAGCSGKD CCHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHCCCCCEEEEEEECCCCHHH ILRAMGLNWSDIYFDDEPGKKKKSKVVKEYIYRDENGRPLHKTLRTANKDFLQKRYENGK HHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCC WKWGLKGVRTVLYKLEEVKEAINNNDVVYLVEGEKDADNLHKIGLTGTCNPLGAGKWKPG EEECHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHEECCCCCCCCCCCCCCCCC YTETLKGARVVILPDNDKPGKKHARNIAKELHGKAKLVKILELPGLDKKEDVSDWLDKGG HHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHCHHHHHHHHHCCCCCCHHHHHHHHHCCC TKEKLLQLVKDCPEWKPGINNWPDPLPFNNFDVKPIPVNILPNWLSDFAINLAEFTQTPI CHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEHHHCHHHHHHHHHHHHHHHCCCC DMSIMLIISALGTALANKGVVQIRKGYTEPLNIWTCTVLPAGNRKSPVFKKIMKPILDYE CHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCHH ERKREEIEPERRHALKEKSILEDQLKQKEKIAGNAKDQAKRKQIMQEIFNLDDEIQEMEI HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHCCC PTLPRLVASDVTTEKLAKLMEDNNGRIAILSPEGDIFKLMAGRYSKNGAANFDNYKKAWT CCHHHHHHHCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHCCCCCCCCCCCCCHHHHCC GGEPIRDDRMARKGTYVKNPALTQGLTVQPVILEDLKEKKAFKGEGILGRFLYAIPESPV CCCCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCC GSRKVGNEVPELSDIAVMRYQKGLSALLHTRPAGENKNGEWEPHIIKLSPEALEVRYEFE CCHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECHHHHHHHHHHH RDIEKELGPEGKLHNIADWGSKLVGNITRVAGLLHIAGQTDAQKGQATRDIWNKPIGPET HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCHHH MKKAVKLGYSLIEHALKVYDLLDTDPEIELARYVLKRIMRGKEMEKAEELPKDKDTLDKS HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHH ILMELCKGKKEIKRPDDLKEPLKLLAELNYITIVERETEGRGRNPSPLIKLNPKVHSINS HHHHHHCCHHHCCCCCCHHHHHHHHHHCCEEEEEEECCCCCCCCCCCEEEECCCHHHHHH IKKDTEYNKSNKSNKSNITPEIKKDENGVIIEGMI HHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECC >Mature Secondary Structure TEEKKLQNFLAKLDKVKKKGPDQWQARCPAHEDKVESLSVSRGDNKINFHCHAGCSGKD CHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHCCCCCEEEEEEECCCCHHH ILRAMGLNWSDIYFDDEPGKKKKSKVVKEYIYRDENGRPLHKTLRTANKDFLQKRYENGK HHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCC WKWGLKGVRTVLYKLEEVKEAINNNDVVYLVEGEKDADNLHKIGLTGTCNPLGAGKWKPG EEECHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHEECCCCCCCCCCCCCCCCC YTETLKGARVVILPDNDKPGKKHARNIAKELHGKAKLVKILELPGLDKKEDVSDWLDKGG HHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHCHHHHHHHHHCCCCCCHHHHHHHHHCCC TKEKLLQLVKDCPEWKPGINNWPDPLPFNNFDVKPIPVNILPNWLSDFAINLAEFTQTPI CHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEHHHCHHHHHHHHHHHHHHHCCCC DMSIMLIISALGTALANKGVVQIRKGYTEPLNIWTCTVLPAGNRKSPVFKKIMKPILDYE CHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCHH ERKREEIEPERRHALKEKSILEDQLKQKEKIAGNAKDQAKRKQIMQEIFNLDDEIQEMEI HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHCCC PTLPRLVASDVTTEKLAKLMEDNNGRIAILSPEGDIFKLMAGRYSKNGAANFDNYKKAWT CCHHHHHHHCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHCCCCCCCCCCCCCHHHHCC GGEPIRDDRMARKGTYVKNPALTQGLTVQPVILEDLKEKKAFKGEGILGRFLYAIPESPV CCCCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCC GSRKVGNEVPELSDIAVMRYQKGLSALLHTRPAGENKNGEWEPHIIKLSPEALEVRYEFE CCHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECHHHHHHHHHHH RDIEKELGPEGKLHNIADWGSKLVGNITRVAGLLHIAGQTDAQKGQATRDIWNKPIGPET HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCHHH MKKAVKLGYSLIEHALKVYDLLDTDPEIELARYVLKRIMRGKEMEKAEELPKDKDTLDKS HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHH ILMELCKGKKEIKRPDDLKEPLKLLAELNYITIVERETEGRGRNPSPLIKLNPKVHSINS HHHHHHCCHHHCCCCCCHHHHHHHHHHCCEEEEEEECCCCCCCCCCCEEEECCCHHHHHH IKKDTEYNKSNKSNKSNITPEIKKDENGVIIEGMI HHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA