| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220931160
Identifier: 220931160
GI number: 220931160
Start: 320563
End: 321048
Strand: Reverse
Name: 220931160
Synonym: Hore_03120
Alternate gene names: NA
Gene position: 321048-320563 (Counterclockwise)
Preceding gene: 220931161
Following gene: 220931159
Centisome position: 12.45
GC content: 29.84
Gene sequence:
>486_bases TTGTTCTATCCTATTTTTTCGTTTACAAAAGGTGAATTAATCTTTATTTTAGCAGTTTTTATTTTAGGAACAATTGTAGG AGCTACTCTGCTAAATATATATTTAAGTCGGAGAATCGATAATTTAATTCTAACTAACCGGGAATTAAAAATAAAAAATG AAGAACAGCAGGAACAGATAGACCAGCTTAAAGAAAATTTAAAAATTTCGAGACGACACTATATAAACAATGTCCAGATA AAATTAAGGAGTGAGTTAAACAAGCATACCCAGCAGGATATAATCCAGAAAATAAAAAAACTTTTATCAGGCCTACCTGG AAAAGAAATAAAGGATATAGACGCACTCCTTATCAGGGACCTAATTAATGATCGTTATTTAGTAATTGAAGATGAAGTCT ATAGACTGGAGTTAATATACCTGGTTATTTCTGAAGAACTGACCCTTTATATTAAGGTTTCTACTAAAAATGGGGAAAAT AATTAA
Upstream 100 bases:
>100_bases ATCCATAATTGTGCAACAATTTTTTATCCTGCTCAGCGCCTTTATGGGAGCCCAGCTCGGTTACTGGCTAGTTATTGTCT TCTGCGGGGGTAAGTAAAAT
Downstream 100 bases:
>100_bases AAATTAGTTTAAATAAACTTAGATTTATAGTATAATAATCACTGGATATTTTTGTGTCCAGGATAACATAAACTTACCAG TAATAATGGTATAATATTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MFYPIFSFTKGELIFILAVFILGTIVGATLLNIYLSRRIDNLILTNRELKIKNEEQQEQIDQLKENLKISRRHYINNVQI KLRSELNKHTQQDIIQKIKKLLSGLPGKEIKDIDALLIRDLINDRYLVIEDEVYRLELIYLVISEELTLYIKVSTKNGEN N
Sequences:
>Translated_161_residues MFYPIFSFTKGELIFILAVFILGTIVGATLLNIYLSRRIDNLILTNRELKIKNEEQQEQIDQLKENLKISRRHYINNVQI KLRSELNKHTQQDIIQKIKKLLSGLPGKEIKDIDALLIRDLINDRYLVIEDEVYRLELIYLVISEELTLYIKVSTKNGEN N >Mature_161_residues MFYPIFSFTKGELIFILAVFILGTIVGATLLNIYLSRRIDNLILTNRELKIKNEEQQEQIDQLKENLKISRRHYINNVQI KLRSELNKHTQQDIIQKIKKLLSGLPGKEIKDIDALLIRDLINDRYLVIEDEVYRLELIYLVISEELTLYIKVSTKNGEN N
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18931; Mature: 18931
Theoretical pI: Translated: 8.75; Mature: 8.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFYPIFSFTKGELIFILAVFILGTIVGATLLNIYLSRRIDNLILTNRELKIKNEEQQEQI CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHH DQLKENLKISRRHYINNVQIKLRSELNKHTQQDIIQKIKKLLSGLPGKEIKDIDALLIRD HHHHHHHHHHHHHHHCHHHEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH LINDRYLVIEDEVYRLELIYLVISEELTLYIKVSTKNGENN HHCCCEEEEECCHHHHHHHEEEEECCEEEEEEEECCCCCCC >Mature Secondary Structure MFYPIFSFTKGELIFILAVFILGTIVGATLLNIYLSRRIDNLILTNRELKIKNEEQQEQI CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHH DQLKENLKISRRHYINNVQIKLRSELNKHTQQDIIQKIKKLLSGLPGKEIKDIDALLIRD HHHHHHHHHHHHHHHCHHHEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH LINDRYLVIEDEVYRLELIYLVISEELTLYIKVSTKNGENN HHCCCEEEEECCHHHHHHHEEEEECCEEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA