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The map label for this gene is yutI [H]

Identifier: 220931159

GI number: 220931159

Start: 320209

End: 320433

Strand: Reverse

Name: yutI [H]

Synonym: Hore_03110

Alternate gene names: 220931159

Gene position: 320433-320209 (Counterclockwise)

Preceding gene: 220931160

Following gene: 220931149

Centisome position: 12.43

GC content: 39.56

Gene sequence:

>225_bases
ATGAAAGAAGAGGTTGCCAAAATCATTGATAAAATTAGACCAAGCCTTCAGGCCGATGGTGGAGACGTAAAACTGGTTGA
CGTTGATGATGAAAAAGGTATAGTAAAAGTTAAATTACTGGGTGCCTGTCAGGGGTGTCCGATGTCAACCATGACTATCA
AAAACGGAATTGAAAGGGTCTTAAAGGAAAAAGTTCCTGGAGTAAAGGAAGTAAAACCCGTATAA

Upstream 100 bases:

>100_bases
GTATAATAATCACTGGATATTTTTGTGTCCAGGATAACATAAACTTACCAGTAATAATGGTATAATATTAACAGGAAAAA
TTCAATAGGGAGGTGTACCG

Downstream 100 bases:

>100_bases
CAAGACCGGTTTTAAGAGACATAACTATAAAAAAGGAAATGAAATTTAAAGCACCCACTTTTACCGGGTGCTTTTTTCAT
TTTCGGTAATACCGATCTCA

Product: nitrogen-fixing NifU domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 74; Mature: 74

Protein sequence:

>74_residues
MKEEVAKIIDKIRPSLQADGGDVKLVDVDDEKGIVKVKLLGACQGCPMSTMTIKNGIERVLKEKVPGVKEVKPV

Sequences:

>Translated_74_residues
MKEEVAKIIDKIRPSLQADGGDVKLVDVDDEKGIVKVKLLGACQGCPMSTMTIKNGIERVLKEKVPGVKEVKPV
>Mature_74_residues
MKEEVAKIIDKIRPSLQADGGDVKLVDVDDEKGIVKVKLLGACQGCPMSTMTIKNGIERVLKEKVPGVKEVKPV

Specific function: May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins [H]

COG id: COG0694

COG function: function code O; Thioredoxin-like proteins and domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nifU family [H]

Homologues:

Organism=Caenorhabditis elegans, GI17541876, Length=61, Percent_Identity=55.7377049180328, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001075
- ProDom:   PD002830 [H]

Pfam domain/function: PF01106 NifU [H]

EC number: NA

Molecular weight: Translated: 8017; Mature: 8017

Theoretical pI: Translated: 8.77; Mature: 8.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEEVAKIIDKIRPSLQADGGDVKLVDVDDEKGIVKVKLLGACQGCPMSTMTIKNGIERV
CHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCHHHHHHHHHHH
LKEKVPGVKEVKPV
HHHHCCCCCCCCCC
>Mature Secondary Structure
MKEEVAKIIDKIRPSLQADGGDVKLVDVDDEKGIVKVKLLGACQGCPMSTMTIKNGIERV
CHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCHHHHHHHHHHH
LKEKVPGVKEVKPV
HHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]