| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220931141
Identifier: 220931141
GI number: 220931141
Start: 300924
End: 301502
Strand: Direct
Name: 220931141
Synonym: Hore_02930
Alternate gene names: NA
Gene position: 300924-301502 (Clockwise)
Preceding gene: 220931140
Following gene: 220931143
Centisome position: 11.67
GC content: 38.17
Gene sequence:
>579_bases ATGATACAACCTGCTTCCCTCGAAAGTGAACATTTTATAGTATTAATCCCCCGGGGAAAGGTGTATAGTCTGGCCCGGGG GATTCAGAAGTTTATTTCTGAAAATTGTAGGATTTCTGATGATGTTTTTTTCCCTGAAATTCATATTACCCTGGACAGGA TTAAAAAGGGTTACAGGGATGAAGTTGTTGCAATTGTGGAAAAGGTTATAAACAAATACAAAAAGATAGATATCTGTGTT AATACAGACCAGAGTTTTCATTTTTATCAAAATAATTTTCTTGTGATGGATATTCTTAACGAGGGCCCACTGATGGAGTT TGCCCTGAATCTTCACCGCGAATTAGAAAAAAGAGGCCTGTCTACAATTAATAATTATCATCAATGGGACCTTCACATTA CTCTTTTGAGCAATCTCTTTGCCTCCAGGCCTATTCCCGACAAACTATTCCGCCATATTTATTATTACATTTCATATAAT ACTAATAAAAAACAGTATGCCTCCGAGGCAGACCGGTTAGAGGTCTGGCGCCCTGAACCAGACCCGGAAAACAGGTGTCT GGCATCTTTTAAGTTATAA
Upstream 100 bases:
>100_bases ATTAACAGGTAGTCAGAATAGAGATTACGTTTTCTGGTACAAAATGAGTTAATAATATACTTATTGTGGAATTGTTTATA TAAATGTCAGGAGACTAAAT
Downstream 100 bases:
>100_bases CTGGTTTTACTTAATAGATACGGGTCAACCAGATAAATAAGGGTATAGTTACCAGGGAAAATAAAGTTGTGATAAAGACA CCTTCAGAGGCAAATTTATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 192; Mature: 192
Protein sequence:
>192_residues MIQPASLESEHFIVLIPRGKVYSLARGIQKFISENCRISDDVFFPEIHITLDRIKKGYRDEVVAIVEKVINKYKKIDICV NTDQSFHFYQNNFLVMDILNEGPLMEFALNLHRELEKRGLSTINNYHQWDLHITLLSNLFASRPIPDKLFRHIYYYISYN TNKKQYASEADRLEVWRPEPDPENRCLASFKL
Sequences:
>Translated_192_residues MIQPASLESEHFIVLIPRGKVYSLARGIQKFISENCRISDDVFFPEIHITLDRIKKGYRDEVVAIVEKVINKYKKIDICV NTDQSFHFYQNNFLVMDILNEGPLMEFALNLHRELEKRGLSTINNYHQWDLHITLLSNLFASRPIPDKLFRHIYYYISYN TNKKQYASEADRLEVWRPEPDPENRCLASFKL >Mature_192_residues MIQPASLESEHFIVLIPRGKVYSLARGIQKFISENCRISDDVFFPEIHITLDRIKKGYRDEVVAIVEKVINKYKKIDICV NTDQSFHFYQNNFLVMDILNEGPLMEFALNLHRELEKRGLSTINNYHQWDLHITLLSNLFASRPIPDKLFRHIYYYISYN TNKKQYASEADRLEVWRPEPDPENRCLASFKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22740; Mature: 22740
Theoretical pI: Translated: 7.63; Mature: 7.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQPASLESEHFIVLIPRGKVYSLARGIQKFISENCRISDDVFFPEIHITLDRIKKGYRD CCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCEECCHHEEEHHHHHCCHHH EVVAIVEKVINKYKKIDICVNTDQSFHFYQNNFLVMDILNEGPLMEFALNLHRELEKRGL HHHHHHHHHHHHHHEEEEEEECCCCEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHH STINNYHQWDLHITLLSNLFASRPIPDKLFRHIYYYISYNTNKKQYASEADRLEVWRPEP HHHCCCCEEEEHHHHHHHHHHCCCCHHHHHHHEEEEEEECCCHHHHHCCCCCEEEECCCC DPENRCLASFKL CCCCCEEEECCC >Mature Secondary Structure MIQPASLESEHFIVLIPRGKVYSLARGIQKFISENCRISDDVFFPEIHITLDRIKKGYRD CCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCEECCHHEEEHHHHHCCHHH EVVAIVEKVINKYKKIDICVNTDQSFHFYQNNFLVMDILNEGPLMEFALNLHRELEKRGL HHHHHHHHHHHHHHEEEEEEECCCCEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHH STINNYHQWDLHITLLSNLFASRPIPDKLFRHIYYYISYNTNKKQYASEADRLEVWRPEP HHHCCCCEEEEHHHHHHHHHHCCCCHHHHHHHEEEEEEECCCHHHHHCCCCCEEEECCCC DPENRCLASFKL CCCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA