| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
Click here to switch to the map view.
The map label for this gene is 220931106
Identifier: 220931106
GI number: 220931106
Start: 264375
End: 265055
Strand: Direct
Name: 220931106
Synonym: Hore_02580
Alternate gene names: NA
Gene position: 264375-265055 (Clockwise)
Preceding gene: 220931105
Following gene: 220931107
Centisome position: 10.25
GC content: 31.86
Gene sequence:
>681_bases ATGTCACCATGGAGCAAAATGGTTAATATTTTTCTTTCCCCTGAAGAAGTTTTCATGGATTTGAAAGAAAAGAGTGATTG GGTGGTTCCTCTTGTTACAATTCTGGTAATAAGCCTGTTGACAACTTTTATTTTACTTCCCAGTGTTATTATTCCAAAAC AGGTAGAGCAGATTACCAATAACCCAAACCTGAGTCTGGAGCAGAAGAATAAAAGTCTTGAAATTATACATGGTCCCGTT AATTATTTTATTACTATAATTGGTAGTGTCCTGGGTATGTTTATTGGGGTACTTATTTTAAGTGGAGGTCTAATGTTAAT CAGGGTTATCTTTAAAGGGGAAAAGGTTCCCTTTAAAAATGTTTTCTCTGGAGCAGTTTATACTAGCTTAATTCCTGCAC TGGGGTCTATCATTACTACAATATTAAGTTATTACCAAAATAGTCTTATTAGCAGTTTTAATCTGTCCCTGTTTGTACCA GAATTAAATAACAAATTTATAAAGATGTTTATAGAAAGAATAACGCTTTTTGGTGTCTGGGAGGTAATTTTAATTGGATT AATGTTATCAATTTTTTATAAATATAGCAAAAAGAAGGCCTTTTCAATCGCTTTTGGTGTTTATTTTATTTTAATTCTTT TCTTTATCTTTTTATCCCAGTTATTGCCACCTGGTGCTTAA
Upstream 100 bases:
>100_bases TTTTATCCTGCCTATAAGGCCTCCAGGCTTGACCCCATAGAGGCTCTAAGATATGAATAGTTTTTTAATGTTTTTTACTT AAATTGAGGAGGTAGATAGA
Downstream 100 bases:
>100_bases ATAAAGGTCATATTTAATATGGAGGAAGAAATATAATTTTTAACATAAAGAAAGCAAAGTTGGGGTATAAAGGATTATAA ATAAGTTAACTTAATAAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 226; Mature: 225
Protein sequence:
>226_residues MSPWSKMVNIFLSPEEVFMDLKEKSDWVVPLVTILVISLLTTFILLPSVIIPKQVEQITNNPNLSLEQKNKSLEIIHGPV NYFITIIGSVLGMFIGVLILSGGLMLIRVIFKGEKVPFKNVFSGAVYTSLIPALGSIITTILSYYQNSLISSFNLSLFVP ELNNKFIKMFIERITLFGVWEVILIGLMLSIFYKYSKKKAFSIAFGVYFILILFFIFLSQLLPPGA
Sequences:
>Translated_226_residues MSPWSKMVNIFLSPEEVFMDLKEKSDWVVPLVTILVISLLTTFILLPSVIIPKQVEQITNNPNLSLEQKNKSLEIIHGPV NYFITIIGSVLGMFIGVLILSGGLMLIRVIFKGEKVPFKNVFSGAVYTSLIPALGSIITTILSYYQNSLISSFNLSLFVP ELNNKFIKMFIERITLFGVWEVILIGLMLSIFYKYSKKKAFSIAFGVYFILILFFIFLSQLLPPGA >Mature_225_residues SPWSKMVNIFLSPEEVFMDLKEKSDWVVPLVTILVISLLTTFILLPSVIIPKQVEQITNNPNLSLEQKNKSLEIIHGPVN YFITIIGSVLGMFIGVLILSGGLMLIRVIFKGEKVPFKNVFSGAVYTSLIPALGSIITTILSYYQNSLISSFNLSLFVPE LNNKFIKMFIERITLFGVWEVILIGLMLSIFYKYSKKKAFSIAFGVYFILILFFIFLSQLLPPGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25471; Mature: 25340
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPWSKMVNIFLSPEEVFMDLKEKSDWVVPLVTILVISLLTTFILLPSVIIPKQVEQITN CCCHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NPNLSLEQKNKSLEIIHGPVNYFITIIGSVLGMFIGVLILSGGLMLIRVIFKGEKVPFKN CCCCEEECCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCHHH VFSGAVYTSLIPALGSIITTILSYYQNSLISSFNLSLFVPELNNKFIKMFIERITLFGVW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHHHHH EVILIGLMLSIFYKYSKKKAFSIAFGVYFILILFFIFLSQLLPPGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SPWSKMVNIFLSPEEVFMDLKEKSDWVVPLVTILVISLLTTFILLPSVIIPKQVEQITN CCHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NPNLSLEQKNKSLEIIHGPVNYFITIIGSVLGMFIGVLILSGGLMLIRVIFKGEKVPFKN CCCCEEECCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCHHH VFSGAVYTSLIPALGSIITTILSYYQNSLISSFNLSLFVPELNNKFIKMFIERITLFGVW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHHHHH EVILIGLMLSIFYKYSKKKAFSIAFGVYFILILFFIFLSQLLPPGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA