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The map label for this gene is rex [H]

Identifier: 220931058

GI number: 220931058

Start: 216087

End: 216740

Strand: Direct

Name: rex [H]

Synonym: Hore_02100

Alternate gene names: 220931058

Gene position: 216087-216740 (Clockwise)

Preceding gene: 220931057

Following gene: 220931059

Centisome position: 8.38

GC content: 42.2

Gene sequence:

>654_bases
TTGGCACAAAGTAAAGGGAGGGTTAAATCACAGGGGATACCGGTAGGAGTCATAAATCGTTTGCCCCATTATTACCGTTA
TTTGAGTTCACTTATGGCAAGGGATGTGGAAAGAATATCATCCCGGGAACTGGCTTCAAAACTCGGGGTTACGGCATCCC
AGATAAGACAGGACCTCAGCTATTTTGGATGTTTTGGTCAGCCAGGATATGGTTACCGGGTTCAGGAGCTTCAGGCAGAG
ATAGGTAAAATACTCGGGGTTAATGAAAATATGCATATGGTTCTGGTGGGGGCCGGGAATCTGGGGATGGCCCTGATGAA
ATACCCTAATTTCAGGAGAAGAGGTTTTTATATAAGAGCCATTTTCGACAGTGATATAAATAAAATTGGACAGGAAGTTG
AAGGGATTGAAATAAAACCGGTCAGTGAACTTGAAAAGTATCTTTCCAGGTTTAATGTAGATATTGGTATTATTGCTACA
CCCGCCGGAGCAGCTCCGGAAATTGCCAGTATTTTTATGAATGGAGGCGTAAAGGGGATCTGGAATTTTGCTCCGGTTAG
TTTAAACCCTGAAGAGGGGGTGGTTATAGAAAACGTCCACATCAGTGAGAGTTTAATGACACTTTCTTATAAAGTAAAAG
AGAAAGACAAATAA

Upstream 100 bases:

>100_bases
TGCCAGGGGGGCTGTATTGGTGGCCCCGGAACGCTGGTAAACCGGCGAGTGGCTTCCGGATTATTAAAAAAGCTTATAAA
ATCCAGGGGTGGTGAAAAAG

Downstream 100 bases:

>100_bases
GATTACAAGAATATAAGGAGGTTTTTAAAATGGCTAAAGCGGTATTAGAAAAAAGTGTTGATAAGGCTACAAAGGAAAAG
AAAGAGATTAGAAAAGGTTT

Product: redox-sensing transcriptional repressor Rex

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 217; Mature: 216

Protein sequence:

>217_residues
MAQSKGRVKSQGIPVGVINRLPHYYRYLSSLMARDVERISSRELASKLGVTASQIRQDLSYFGCFGQPGYGYRVQELQAE
IGKILGVNENMHMVLVGAGNLGMALMKYPNFRRRGFYIRAIFDSDINKIGQEVEGIEIKPVSELEKYLSRFNVDIGIIAT
PAGAAPEIASIFMNGGVKGIWNFAPVSLNPEEGVVIENVHISESLMTLSYKVKEKDK

Sequences:

>Translated_217_residues
MAQSKGRVKSQGIPVGVINRLPHYYRYLSSLMARDVERISSRELASKLGVTASQIRQDLSYFGCFGQPGYGYRVQELQAE
IGKILGVNENMHMVLVGAGNLGMALMKYPNFRRRGFYIRAIFDSDINKIGQEVEGIEIKPVSELEKYLSRFNVDIGIIAT
PAGAAPEIASIFMNGGVKGIWNFAPVSLNPEEGVVIENVHISESLMTLSYKVKEKDK
>Mature_216_residues
AQSKGRVKSQGIPVGVINRLPHYYRYLSSLMARDVERISSRELASKLGVTASQIRQDLSYFGCFGQPGYGYRVQELQAEI
GKILGVNENMHMVLVGAGNLGMALMKYPNFRRRGFYIRAIFDSDINKIGQEVEGIEIKPVSELEKYLSRFNVDIGIIATP
AGAAPEIASIFMNGGVKGIWNFAPVSLNPEEGVVIENVHISESLMTLSYKVKEKDK

Specific function: Modulates transcription in response to changes in cellular NADH/NAD(+) redox state [H]

COG id: COG2344

COG function: function code R; AT-rich DNA-binding protein

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transcriptional regulatory rex family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003781
- InterPro:   IPR016040
- InterPro:   IPR009718
- InterPro:   IPR022876
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02629 CoA_binding; PF06971 Put_DNA-bind_N [H]

EC number: NA

Molecular weight: Translated: 24077; Mature: 23946

Theoretical pI: Translated: 9.42; Mature: 9.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQSKGRVKSQGIPVGVINRLPHYYRYLSSLMARDVERISSRELASKLGVTASQIRQDLS
CCCCCCCCHHCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
YFGCFGQPGYGYRVQELQAEIGKILGVNENMHMVLVGAGNLGMALMKYPNFRRRGFYIRA
HHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHCCCCCCCCEEEEE
IFDSDINKIGQEVEGIEIKPVSELEKYLSRFNVDIGIIATPAGAAPEIASIFMNGGVKGI
EEHHHHHHHHHHHCCCEECCHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHCCCCCEE
WNFAPVSLNPEEGVVIENVHISESLMTLSYKVKEKDK
ECCCCCEECCCCCEEEEEEEHHHHHHHEEEEECCCCC
>Mature Secondary Structure 
AQSKGRVKSQGIPVGVINRLPHYYRYLSSLMARDVERISSRELASKLGVTASQIRQDLS
CCCCCCCHHCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
YFGCFGQPGYGYRVQELQAEIGKILGVNENMHMVLVGAGNLGMALMKYPNFRRRGFYIRA
HHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHCCCCCCCCEEEEE
IFDSDINKIGQEVEGIEIKPVSELEKYLSRFNVDIGIIATPAGAAPEIASIFMNGGVKGI
EEHHHHHHHHHHHCCCEECCHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHCCCCCEE
WNFAPVSLNPEEGVVIENVHISESLMTLSYKVKEKDK
ECCCCCEECCCCCEEEEEEEHHHHHHHEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA