| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220931038
Identifier: 220931038
GI number: 220931038
Start: 194836
End: 195729
Strand: Direct
Name: 220931038
Synonym: Hore_01890
Alternate gene names: NA
Gene position: 194836-195729 (Clockwise)
Preceding gene: 220931037
Following gene: 220931039
Centisome position: 7.56
GC content: 40.27
Gene sequence:
>894_bases ATGACAGAAGGAAAGAAGGAAAAACAACTGGATAGCAGGACTAAAAAAATGATTCTGGACTATCAAAAAAATGAAATTAC AGAATATAAAATATATACCAGACTGGCTAAACGGATCAAGGATAAAAACAATAAAAAAGTTCTGGAGGAAATCGGGAGAG ATGAACTAAAGCACTATGAGTTCTGGAAAAAACATACCGGTCAGGATGTTAAGCCCAGTAAGTGGAAGGTATTCTTTTAT TACTGGATAGCAGTTATATTCGGTCTGACCTTTGGGATAAAGCTAATGGAAAAGGGTGAAGAAGAGGCCCAGGTTATCTA TAAACAGGTGGCCGATAAGATCCCCGGAGCAGCCAGCATCATGGAAGATGAATACAGGCACGAACACGAGCTTTTAAATC TGCTGGAAGAAGAACACCTTCAATATGTTGGTTCTGTTGTTCTGGGGTTAAATGATGCTCTGGTGGAGTTAACGGGAACA CTGGCTGGATTAAGTTTTGCGTTAAAAAACACAAATTTAATTGCAATAGCCGGATTGATAACCGGTATCGCTGCTTCTTT TTCAATGGGGGCTTCAGAGTATCTCTCTACTAAATCTGAAAGTGACCATGGTGAGGCTCTGAAATCATCTATGTATACCG GGGGAGCCTATATTATTACCGTTTTCTTCCTGGTTTTGCCCTTTTTACTCCTGGCAGGTTATATGACAGCACTGTTAGTT ACTATATTGTTAGCCATTTTAATCATTTTTGTCTTCAATTATTATATAGCAGTGGCCAAGGATCTGGACTTTAAAAAACG GTTTCTGGAAATGGCCACCATCAGCCTTGGGGTAGCTGTCCTCTCCTTCGGTATTGGTTATCTGGTGAGGGTATTCCTGG GAGTTGATGTCTAG
Upstream 100 bases:
>100_bases GACCATGCTAAGATATGCAATTGAAAAGTTTGAGCCCAAATTAAGGAAGAAGTTTCTGAACGGTCAGATCTGATTATAAA AAGAAAAGGGGTGATTATGA
Downstream 100 bases:
>100_bases TATTAAATCGGGTAAGACTGAAAAAATATATAACAAAACTTGACACTGAATCTATTTATGTGTATAATATATAATCAAAC AAAAGATAAAAAATTTGTAA
Product: hypothetical protein
Products: NA
Alternate protein names: Ferritin CCC1 C Ferritin CCC1 Like C; Transmembrane Protein
Number of amino acids: Translated: 297; Mature: 296
Protein sequence:
>297_residues MTEGKKEKQLDSRTKKMILDYQKNEITEYKIYTRLAKRIKDKNNKKVLEEIGRDELKHYEFWKKHTGQDVKPSKWKVFFY YWIAVIFGLTFGIKLMEKGEEEAQVIYKQVADKIPGAASIMEDEYRHEHELLNLLEEEHLQYVGSVVLGLNDALVELTGT LAGLSFALKNTNLIAIAGLITGIAASFSMGASEYLSTKSESDHGEALKSSMYTGGAYIITVFFLVLPFLLLAGYMTALLV TILLAILIIFVFNYYIAVAKDLDFKKRFLEMATISLGVAVLSFGIGYLVRVFLGVDV
Sequences:
>Translated_297_residues MTEGKKEKQLDSRTKKMILDYQKNEITEYKIYTRLAKRIKDKNNKKVLEEIGRDELKHYEFWKKHTGQDVKPSKWKVFFY YWIAVIFGLTFGIKLMEKGEEEAQVIYKQVADKIPGAASIMEDEYRHEHELLNLLEEEHLQYVGSVVLGLNDALVELTGT LAGLSFALKNTNLIAIAGLITGIAASFSMGASEYLSTKSESDHGEALKSSMYTGGAYIITVFFLVLPFLLLAGYMTALLV TILLAILIIFVFNYYIAVAKDLDFKKRFLEMATISLGVAVLSFGIGYLVRVFLGVDV >Mature_296_residues TEGKKEKQLDSRTKKMILDYQKNEITEYKIYTRLAKRIKDKNNKKVLEEIGRDELKHYEFWKKHTGQDVKPSKWKVFFYY WIAVIFGLTFGIKLMEKGEEEAQVIYKQVADKIPGAASIMEDEYRHEHELLNLLEEEHLQYVGSVVLGLNDALVELTGTL AGLSFALKNTNLIAIAGLITGIAASFSMGASEYLSTKSESDHGEALKSSMYTGGAYIITVFFLVLPFLLLAGYMTALLVT ILLAILIIFVFNYYIAVAKDLDFKKRFLEMATISLGVAVLSFGIGYLVRVFLGVDV
Specific function: Unknown
COG id: COG1814
COG function: function code S; Uncharacterized membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33575; Mature: 33444
Theoretical pI: Translated: 7.18; Mature: 7.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEGKKEKQLDSRTKKMILDYQKNEITEYKIYTRLAKRIKDKNNKKVLEEIGRDELKHYE CCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHH FWKKHTGQDVKPSKWKVFFYYWIAVIFGLTFGIKLMEKGEEEAQVIYKQVADKIPGAASI HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHH MEDEYRHEHELLNLLEEEHLQYVGSVVLGLNDALVELTGTLAGLSFALKNTNLIAIAGLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH TGIAASFSMGASEYLSTKSESDHGEALKSSMYTGGAYIITVFFLVLPFLLLAGYMTALLV HHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH TILLAILIIFVFNYYIAVAKDLDFKKRFLEMATISLGVAVLSFGIGYLVRVFLGVDV HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TEGKKEKQLDSRTKKMILDYQKNEITEYKIYTRLAKRIKDKNNKKVLEEIGRDELKHYE CCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHH FWKKHTGQDVKPSKWKVFFYYWIAVIFGLTFGIKLMEKGEEEAQVIYKQVADKIPGAASI HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHH MEDEYRHEHELLNLLEEEHLQYVGSVVLGLNDALVELTGTLAGLSFALKNTNLIAIAGLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH TGIAASFSMGASEYLSTKSESDHGEALKSSMYTGGAYIITVFFLVLPFLLLAGYMTALLV HHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH TILLAILIIFVFNYYIAVAKDLDFKKRFLEMATISLGVAVLSFGIGYLVRVFLGVDV HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA