| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220931035
Identifier: 220931035
GI number: 220931035
Start: 192843
End: 193217
Strand: Direct
Name: 220931035
Synonym: Hore_01860
Alternate gene names: NA
Gene position: 192843-193217 (Clockwise)
Preceding gene: 220931034
Following gene: 220931036
Centisome position: 7.48
GC content: 41.6
Gene sequence:
>375_bases ATGTCTGAAGGAACCAAAGAAGTTTCCAGTGCACCACTTATTTTAGGTATTATTGGGGGTGTGCTCGGAATTCCGGCTTC ATTCTGTGCAGGGGCCTGTGCTGGTTTCATTACTGCTATGTCCAGCACCGCAGAAGAGGCTTCAGCTGTTGCTGACTTTT ATATGTGGGTATGTTTAATTGGAGCAGTTTTAGGTCTTATTTTTGCAATCAGGTCTAAAAAGTCTCCGAAATCATCAGGG ATTGTAATGATCATTGCCGCTGTTTTAACAGGGTTTACTGTTATTGCCGGTAATGGACTGGCTTTGATTGCAGGTATTTT ATTCCTTATTGCCGGTATTCTTTCCATTAATGAGGCTAAAAAAGTAGCTGCTTAA
Upstream 100 bases:
>100_bases AACTTTTTTGTAGGAATTAAGAAGGATTTTTTGTAAGGTTTAACGAATTAAGTAATGGAAAGATTATATTTACATACTAA AATAATATGGAGGTGTTTTT
Downstream 100 bases:
>100_bases CATTTAAGTAAAAGTCAGGGTGACTGGAAAATGTTACCCTGATTTTTTAATAACTTATTTTTTTGTGTTTTTACTGTTAC TTTTCTAAAGATATATAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 124; Mature: 123
Protein sequence:
>124_residues MSEGTKEVSSAPLILGIIGGVLGIPASFCAGACAGFITAMSSTAEEASAVADFYMWVCLIGAVLGLIFAIRSKKSPKSSG IVMIIAAVLTGFTVIAGNGLALIAGILFLIAGILSINEAKKVAA
Sequences:
>Translated_124_residues MSEGTKEVSSAPLILGIIGGVLGIPASFCAGACAGFITAMSSTAEEASAVADFYMWVCLIGAVLGLIFAIRSKKSPKSSG IVMIIAAVLTGFTVIAGNGLALIAGILFLIAGILSINEAKKVAA >Mature_123_residues SEGTKEVSSAPLILGIIGGVLGIPASFCAGACAGFITAMSSTAEEASAVADFYMWVCLIGAVLGLIFAIRSKKSPKSSGI VMIIAAVLTGFTVIAGNGLALIAGILFLIAGILSINEAKKVAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12363; Mature: 12232
Theoretical pI: Translated: 8.04; Mature: 8.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEGTKEVSSAPLILGIIGGVLGIPASFCAGACAGFITAMSSTAEEASAVADFYMWVCLI CCCCCHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GAVLGLIFAIRSKKSPKSSGIVMIIAAVLTGFTVIAGNGLALIAGILFLIAGILSINEAK HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH KVAA HCCC >Mature Secondary Structure SEGTKEVSSAPLILGIIGGVLGIPASFCAGACAGFITAMSSTAEEASAVADFYMWVCLI CCCCHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GAVLGLIFAIRSKKSPKSSGIVMIIAAVLTGFTVIAGNGLALIAGILFLIAGILSINEAK HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH KVAA HCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA