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The map label for this gene is yteT [H]

Identifier: 220930929

GI number: 220930929

Start: 93505

End: 94767

Strand: Direct

Name: yteT [H]

Synonym: Hore_00810

Alternate gene names: 220930929

Gene position: 93505-94767 (Clockwise)

Preceding gene: 220930928

Following gene: 220930931

Centisome position: 3.63

GC content: 38.95

Gene sequence:

>1263_bases
GTGGTGAGTGAACCAGTTACGGTAGCCGTACTGGGGGCCGGTAATAGAGGGAGAGAAGCTTATGGTGAATATATTCTCCG
TCATCCAGAAGAGATAAGGGTGGTTGCTGTAGCCGAACCCGATAAAGATAAAAGAAGTCTTTTCTCGAAGGAACATAATA
TCCCTGAAGAAAATCAATTTTCATCATGGGAGGAGCTATTATCCCGGGAACGCCTGGCAGATGGGATTATTATTGCAACT
CTTGATAAGATGCATATAGAACCGACCAGGAAAGCTTTAAAAAGGGGATATGATATCCTCCTGGAAAAACCAATTGCCCC
TACTCTTCAGGAGACTATTAGTATTGCTAGAGAGGCTCAGAAATATTCAAATAATATTCTGGTGGCCCATGTCCTGAGAT
ATACAAACTTTTACAGGGGACTAAAAGAGATTCTAAAAAAAGGTATAATCGGAAAAATAAGATTTGTTGATCATATTGAG
AATATAGGGTTTTACCATTTTGCCCATAGTTATGTAAGGGGAAACTGGCGGAATACAGAAGTTGCTGCTCCTATAATACT
GGCAAAAAGCTGTCATGATATGGATATCCTGTACTGGCTGTTAGAGAAAAAGTGCAAAAACTTATCTTCCCATGCCTCTC
TCGAATACTTTACTGAAAAAAATCAACCCGAGGGAGCCAGTGACCGCTGTCTATACTGTGGTGTCGAAGAAGACTGCCCC
TATTCAGCCCGCAAGATATATCTTAATGAAAATACAGGATGGCCGGCATCAGTAATTACAACCGACCTTTCTTATGAAGG
AAGGTATAAAGCTCTTAAAGAAGGTCCTTACGGCCGTTGTGTATTTAAGTGTGATAATAATGTACCTGAAGTTCAAACAG
TACGAATGCTTTTTGAAGATGATATTGAAGTGAATTTTGCTCTGACTGCCTTTTCTAATGAAATTACCAGAACAACTAAC
ATTTACGGTAGTAAAGGTGAAATCAGGGCTGATTTTGAAAACGGAGTTATAGAAATATATGAATTTGGCCGGCATAAAAG
TGTAATGACAATTAATAAAGATACAGGAGGTCATGGGGGAGGAGATACCGGCTTAATGAAACATTTTGTAAAAGTTCTAA
GAGGAGAATTAAAGACAGAAGGTTTGACCTCCCTTAGTGCTTCTATTGAAAGCCATATTATGGCTTTTGCCGCAGAAAAG
GCCAGGGACAGAAAATCAGTAATTTCTCTGGATGAGTTAAAAAATGATATTATCAATAAGTAA

Upstream 100 bases:

>100_bases
TTTTTTTAAAGTAAGTCGATCTTTTATATGGAGCTTTCAACTAAAAAGGACTTAAAGGAAGTTTATTTGTCAATTAATAA
TTTAATAAAAGGGGTTGATT

Downstream 100 bases:

>100_bases
AAATAATTATTAAAAATGGTAGTATTAAATGGTGAATTTGAAGTGGTATGTCAACATAGTGAATTAAATAGTTACTGTTA
AATAGCCGCTTGAATATAGC

Product: oxidoreductase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 420; Mature: 420

Protein sequence:

>420_residues
MVSEPVTVAVLGAGNRGREAYGEYILRHPEEIRVVAVAEPDKDKRSLFSKEHNIPEENQFSSWEELLSRERLADGIIIAT
LDKMHIEPTRKALKRGYDILLEKPIAPTLQETISIAREAQKYSNNILVAHVLRYTNFYRGLKEILKKGIIGKIRFVDHIE
NIGFYHFAHSYVRGNWRNTEVAAPIILAKSCHDMDILYWLLEKKCKNLSSHASLEYFTEKNQPEGASDRCLYCGVEEDCP
YSARKIYLNENTGWPASVITTDLSYEGRYKALKEGPYGRCVFKCDNNVPEVQTVRMLFEDDIEVNFALTAFSNEITRTTN
IYGSKGEIRADFENGVIEIYEFGRHKSVMTINKDTGGHGGGDTGLMKHFVKVLRGELKTEGLTSLSASIESHIMAFAAEK
ARDRKSVISLDELKNDIINK

Sequences:

>Translated_420_residues
MVSEPVTVAVLGAGNRGREAYGEYILRHPEEIRVVAVAEPDKDKRSLFSKEHNIPEENQFSSWEELLSRERLADGIIIAT
LDKMHIEPTRKALKRGYDILLEKPIAPTLQETISIAREAQKYSNNILVAHVLRYTNFYRGLKEILKKGIIGKIRFVDHIE
NIGFYHFAHSYVRGNWRNTEVAAPIILAKSCHDMDILYWLLEKKCKNLSSHASLEYFTEKNQPEGASDRCLYCGVEEDCP
YSARKIYLNENTGWPASVITTDLSYEGRYKALKEGPYGRCVFKCDNNVPEVQTVRMLFEDDIEVNFALTAFSNEITRTTN
IYGSKGEIRADFENGVIEIYEFGRHKSVMTINKDTGGHGGGDTGLMKHFVKVLRGELKTEGLTSLSASIESHIMAFAAEK
ARDRKSVISLDELKNDIINK
>Mature_420_residues
MVSEPVTVAVLGAGNRGREAYGEYILRHPEEIRVVAVAEPDKDKRSLFSKEHNIPEENQFSSWEELLSRERLADGIIIAT
LDKMHIEPTRKALKRGYDILLEKPIAPTLQETISIAREAQKYSNNILVAHVLRYTNFYRGLKEILKKGIIGKIRFVDHIE
NIGFYHFAHSYVRGNWRNTEVAAPIILAKSCHDMDILYWLLEKKCKNLSSHASLEYFTEKNQPEGASDRCLYCGVEEDCP
YSARKIYLNENTGWPASVITTDLSYEGRYKALKEGPYGRCVFKCDNNVPEVQTVRMLFEDDIEVNFALTAFSNEITRTTN
IYGSKGEIRADFENGVIEIYEFGRHKSVMTINKDTGGHGGGDTGLMKHFVKVLRGELKTEGLTSLSASIESHIMAFAAEK
ARDRKSVISLDELKNDIINK

Specific function: May play a role in the degradation of type I rhamnogalacturonan derived from plant cell walls [H]

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 47665; Mature: 47665

Theoretical pI: Translated: 6.84; Mature: 6.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSEPVTVAVLGAGNRGREAYGEYILRHPEEIRVVAVAEPDKDKRSLFSKEHNIPEENQF
CCCCCEEEEEEECCCCCHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCCC
SSWEELLSRERLADGIIIATLDKMHIEPTRKALKRGYDILLEKPIAPTLQETISIAREAQ
HHHHHHHHHHHHHCCEEEEEECHHCCCHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHH
KYSNNILVAHVLRYTNFYRGLKEILKKGIIGKIRFVDHIENIGFYHFAHSYVRGNWRNTE
HHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHCCCHHHHHHHHHCCCCCCCC
VAAPIILAKSCHDMDILYWLLEKKCKNLSSHASLEYFTEKNQPEGASDRCLYCGVEEDCP
CCCCEEEECCCCCHHHHHHHHHHHHHCCHHCCCCHHHHCCCCCCCCCCCEEEECCCCCCC
YSARKIYLNENTGWPASVITTDLSYEGRYKALKEGPYGRCVFKCDNNVPEVQTVRMLFED
CCEEEEEEECCCCCCHHHEEECCCCCCCHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHC
DIEVNFALTAFSNEITRTTNIYGSKGEIRADFENGVIEIYEFGRHKSVMTINKDTGGHGG
CCEEEEEEEECCCCHHEEEEECCCCCCEEEECCCCEEEEEECCCCCEEEEEECCCCCCCC
GDTGLMKHFVKVLRGELKTEGLTSLSASIESHIMAFAAEKARDRKSVISLDELKNDIINK
CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVSEPVTVAVLGAGNRGREAYGEYILRHPEEIRVVAVAEPDKDKRSLFSKEHNIPEENQF
CCCCCEEEEEEECCCCCHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCCC
SSWEELLSRERLADGIIIATLDKMHIEPTRKALKRGYDILLEKPIAPTLQETISIAREAQ
HHHHHHHHHHHHHCCEEEEEECHHCCCHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHH
KYSNNILVAHVLRYTNFYRGLKEILKKGIIGKIRFVDHIENIGFYHFAHSYVRGNWRNTE
HHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHCCCHHHHHHHHHCCCCCCCC
VAAPIILAKSCHDMDILYWLLEKKCKNLSSHASLEYFTEKNQPEGASDRCLYCGVEEDCP
CCCCEEEECCCCCHHHHHHHHHHHHHCCHHCCCCHHHHCCCCCCCCCCCEEEECCCCCCC
YSARKIYLNENTGWPASVITTDLSYEGRYKALKEGPYGRCVFKCDNNVPEVQTVRMLFED
CCEEEEEEECCCCCCHHHEEECCCCCCCHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHC
DIEVNFALTAFSNEITRTTNIYGSKGEIRADFENGVIEIYEFGRHKSVMTINKDTGGHGG
CCEEEEEEEECCCCHHEEEEECCCCCCEEEECCCCEEEEEECCCCCEEEEEECCCCCCCC
GDTGLMKHFVKVLRGELKTEGLTSLSASIESHIMAFAAEKARDRKSVISLDELKNDIINK
CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]