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The map label for this gene is yurM [H]

Identifier: 220930928

GI number: 220930928

Start: 92550

End: 93392

Strand: Direct

Name: yurM [H]

Synonym: Hore_00800

Alternate gene names: 220930928

Gene position: 92550-93392 (Clockwise)

Preceding gene: 220930927

Following gene: 220930929

Centisome position: 3.59

GC content: 39.26

Gene sequence:

>843_bases
ATGAACTCTAGAGTCTGGGAAAGGGTAGACCGGGTAATTACCCATTTTTTACTTATATTATTATTAGGTATTTTATTATT
TCCAGCCCTTATTATGATTTCAACTGCCCTCAAGACATTTGACGGTGTTTTTACCTGGCCACCTACTCTGTTTCCCCGTA
TAATACAGTGGAGTAATTTTTCCCGGGTTTTATTTGGTAAGTATCAGTTTTATCAGTATTTTATAAACAGTTTTATTGTG
GCCGGAGTTACAAGTCTGGTCTGTATTTTACTGGGATTACCTGCTTCATATGCTTTTTCCCGGTTCAGATTTTATGGGAA
AAAATTATTTCTCTTTGCCATACTGGCCACCCAGATGTTTTCACCGGTTATTTTAATTATACCTTTATATAAGGTAATGA
AGTCAGCAGGCCTTATGGATACCTACTTTGCTTTAATTATAGCCAATACTGCCTTTGCTCTACCCATGAGCATCTGGCTT
TTGACAGGTTATTTGCAGTCTATTCCCGTTTCCCTGGAAGAGGCAGCCATGATAGATGGGACTTCAAGGATTGGTGCTTT
ATTTAAAATTATTTTACCATTAGCTGCCCCGGGGATTATAACATCAGGTATTTATGCCTTTATCCTGGCCTGGAATGATT
TAATCTTTGCCCTGACCTTTATTACCAAACAGGGGATGAGACCAATAACCCTGGCCCTGACGGATTTTGCCGGTAAAAAC
GTAATTTACTGGAATGATATGATGGCTGCAGCAGTCCTGTCAGTATTACCGGTAGCTTTTTTGTTTTCCCTTGTGCAGAA
ATACCTTGTTCAGGGTTTAACAGCAGGTTCTGTTAAGGGGTAA

Upstream 100 bases:

>100_bases
GCTTTTCAAAAGTTTAACATTGGACTGGGTTCTACCTATGCCGTTATTATCTTTATTATTCTTATGATTTTCAGTATAAC
TTACTGGAGGAGGTTTAATG

Downstream 100 bases:

>100_bases
AACCATGGTATATTTTTTTAAAGTAAGTCGATCTTTTATATGGAGCTTTCAACTAAAAAGGACTTAAAGGAAGTTTATTT
GTCAATTAATAATTTAATAA

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MNSRVWERVDRVITHFLLILLLGILLFPALIMISTALKTFDGVFTWPPTLFPRIIQWSNFSRVLFGKYQFYQYFINSFIV
AGVTSLVCILLGLPASYAFSRFRFYGKKLFLFAILATQMFSPVILIIPLYKVMKSAGLMDTYFALIIANTAFALPMSIWL
LTGYLQSIPVSLEEAAMIDGTSRIGALFKIILPLAAPGIITSGIYAFILAWNDLIFALTFITKQGMRPITLALTDFAGKN
VIYWNDMMAAAVLSVLPVAFLFSLVQKYLVQGLTAGSVKG

Sequences:

>Translated_280_residues
MNSRVWERVDRVITHFLLILLLGILLFPALIMISTALKTFDGVFTWPPTLFPRIIQWSNFSRVLFGKYQFYQYFINSFIV
AGVTSLVCILLGLPASYAFSRFRFYGKKLFLFAILATQMFSPVILIIPLYKVMKSAGLMDTYFALIIANTAFALPMSIWL
LTGYLQSIPVSLEEAAMIDGTSRIGALFKIILPLAAPGIITSGIYAFILAWNDLIFALTFITKQGMRPITLALTDFAGKN
VIYWNDMMAAAVLSVLPVAFLFSLVQKYLVQGLTAGSVKG
>Mature_280_residues
MNSRVWERVDRVITHFLLILLLGILLFPALIMISTALKTFDGVFTWPPTLFPRIIQWSNFSRVLFGKYQFYQYFINSFIV
AGVTSLVCILLGLPASYAFSRFRFYGKKLFLFAILATQMFSPVILIIPLYKVMKSAGLMDTYFALIIANTAFALPMSIWL
LTGYLQSIPVSLEEAAMIDGTSRIGALFKIILPLAAPGIITSGIYAFILAWNDLIFALTFITKQGMRPITLALTDFAGKN
VIYWNDMMAAAVLSVLPVAFLFSLVQKYLVQGLTAGSVKG

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=282, Percent_Identity=35.8156028368794, Blast_Score=159, Evalue=2e-40,
Organism=Escherichia coli, GI1790464, Length=292, Percent_Identity=29.7945205479452, Blast_Score=118, Evalue=4e-28,
Organism=Escherichia coli, GI1789860, Length=269, Percent_Identity=25.6505576208178, Blast_Score=87, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31251; Mature: 31251

Theoretical pI: Translated: 10.17; Mature: 10.17

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSRVWERVDRVITHFLLILLLGILLFPALIMISTALKTFDGVFTWPPTLFPRIIQWSNF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCC
SRVLFGKYQFYQYFINSFIVAGVTSLVCILLGLPASYAFSRFRFYGKKLFLFAILATQMF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SPVILIIPLYKVMKSAGLMDTYFALIIANTAFALPMSIWLLTGYLQSIPVSLEEAAMIDG
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCC
TSRIGALFKIILPLAAPGIITSGIYAFILAWNDLIFALTFITKQGMRPITLALTDFAGKN
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC
VIYWNDMMAAAVLSVLPVAFLFSLVQKYLVQGLTAGSVKG
EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MNSRVWERVDRVITHFLLILLLGILLFPALIMISTALKTFDGVFTWPPTLFPRIIQWSNF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCC
SRVLFGKYQFYQYFINSFIVAGVTSLVCILLGLPASYAFSRFRFYGKKLFLFAILATQMF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SPVILIIPLYKVMKSAGLMDTYFALIIANTAFALPMSIWLLTGYLQSIPVSLEEAAMIDG
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCC
TSRIGALFKIILPLAAPGIITSGIYAFILAWNDLIFALTFITKQGMRPITLALTDFAGKN
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC
VIYWNDMMAAAVLSVLPVAFLFSLVQKYLVQGLTAGSVKG
EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]