| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220930881
Identifier: 220930881
GI number: 220930881
Start: 38149
End: 38397
Strand: Reverse
Name: 220930881
Synonym: Hore_00320
Alternate gene names: NA
Gene position: 38397-38149 (Counterclockwise)
Preceding gene: 220930894
Following gene: 220930880
Centisome position: 1.49
GC content: 28.51
Gene sequence:
>249_bases ATGCCTACTTTACAAGTCCGTAATTTACCTGAACATATTTATAACAAAATTGTTGAACTTGCTGAAGAAGACCGCAGAAG TATTACTCAAGAAACAATTATTTTATTAGAAAAAGCTTTAGAGATGGAAAAACAAAATAAAAAACATCGTAAAAAATTAT TAAATAAAATTATTAATGAAACCAAATCTGATAATTTTGATAATGTACCTGACCCTGTTCCACTTATTAGGGAGGACCGT CAAAGATGA
Upstream 100 bases:
>100_bases TTCAGCCAGGTTATCAACATTATAGTTCCCATATATTATTAATGCATATTGCATGCATTTTATTTTTATGTTATAATATA CCCAGAAAGGAGGTAGCTTT
Downstream 100 bases:
>100_bases TAATAACTTTAGATGTTAGTGCTGCTATTGAATTTATTATGGGACGAAAATATCAACCATTTATTAAGTCTAAACTAGAA AAAGCTGACTGGATTATTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 82; Mature: 81
Protein sequence:
>82_residues MPTLQVRNLPEHIYNKIVELAEEDRRSITQETIILLEKALEMEKQNKKHRKKLLNKIINETKSDNFDNVPDPVPLIREDR QR
Sequences:
>Translated_82_residues MPTLQVRNLPEHIYNKIVELAEEDRRSITQETIILLEKALEMEKQNKKHRKKLLNKIINETKSDNFDNVPDPVPLIREDR QR >Mature_81_residues PTLQVRNLPEHIYNKIVELAEEDRRSITQETIILLEKALEMEKQNKKHRKKLLNKIINETKSDNFDNVPDPVPLIREDRQ R
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9816; Mature: 9685
Theoretical pI: Translated: 9.07; Mature: 9.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTLQVRNLPEHIYNKIVELAEEDRRSITQETIILLEKALEMEKQNKKHRKKLLNKIINE CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TKSDNFDNVPDPVPLIREDRQR HCCCCCCCCCCCCCHHHCCCCC >Mature Secondary Structure PTLQVRNLPEHIYNKIVELAEEDRRSITQETIILLEKALEMEKQNKKHRKKLLNKIINE CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TKSDNFDNVPDPVPLIREDRQR HCCCCCCCCCCCCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA