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The map label for this gene is 220930880

Identifier: 220930880

GI number: 220930880

Start: 37748

End: 38152

Strand: Reverse

Name: 220930880

Synonym: Hore_00310

Alternate gene names: NA

Gene position: 38152-37748 (Counterclockwise)

Preceding gene: 220930881

Following gene: 220930872

Centisome position: 1.48

GC content: 28.64

Gene sequence:

>405_bases
ATGATAATAACTTTAGATGTTAGTGCTGCTATTGAATTTATTATGGGACGAAAATATCAACCATTTATTAAGTCTAAACT
AGAAAAAGCTGACTGGATTATTGCTCCCACCCTTTTCATTTACGAAGCTTCAAATGTTATGTGGAAATATCATTCCATTA
AAAATTATCCCCAAGATAAATTATTACGAAAGTTGCGGCAAATACTGAATATTATAGATCAATTTGTTGAACCAAAAAAT
ATTTATGAAGAAGCTATTTCAGTATCCTTTAAAATTGATCACCCTGTATATGATGCAATGTATTTGGTCACTTCTCGTAG
AAAAAATGCTAAATTATTAACTATGGATAATAGATTAATTAAAGCTGCAAGCAAACTTGAAATACCGGTATATGATTTTA
ATTAG

Upstream 100 bases:

>100_bases
ATCGTAAAAAATTATTAAATAAAATTATTAATGAAACCAAATCTGATAATTTTGATAATGTACCTGACCCTGTTCCACTT
ATTAGGGAGGACCGTCAAAG

Downstream 100 bases:

>100_bases
GGCTGAATTTCACATAACGTAACCGTATTGCCGAAGTCCATCAGACTTAGATAGCTCCTAACTTAGTCTGATGGATTTGG
GTGCAGCGTAGCGGAACCGG

Product: putative nucleic acid-binding protein, contains PIN domain

Products: NA

Alternate protein names: PilT Protein Domain-Containing Protein

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MIITLDVSAAIEFIMGRKYQPFIKSKLEKADWIIAPTLFIYEASNVMWKYHSIKNYPQDKLLRKLRQILNIIDQFVEPKN
IYEEAISVSFKIDHPVYDAMYLVTSRRKNAKLLTMDNRLIKAASKLEIPVYDFN

Sequences:

>Translated_134_residues
MIITLDVSAAIEFIMGRKYQPFIKSKLEKADWIIAPTLFIYEASNVMWKYHSIKNYPQDKLLRKLRQILNIIDQFVEPKN
IYEEAISVSFKIDHPVYDAMYLVTSRRKNAKLLTMDNRLIKAASKLEIPVYDFN
>Mature_134_residues
MIITLDVSAAIEFIMGRKYQPFIKSKLEKADWIIAPTLFIYEASNVMWKYHSIKNYPQDKLLRKLRQILNIIDQFVEPKN
IYEEAISVSFKIDHPVYDAMYLVTSRRKNAKLLTMDNRLIKAASKLEIPVYDFN

Specific function: Unknown

COG id: COG4113

COG function: function code R; Predicted nucleic acid-binding protein, contains PIN domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15804; Mature: 15804

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIITLDVSAAIEFIMGRKYQPFIKSKLEKADWIIAPTLFIYEASNVMWKYHSIKNYPQDK
CEEEEEHHHHHHHHHCCCCCHHHHHHHHHCCEEEECEEEEEECCCCEEEEHHHCCCCHHH
LLRKLRQILNIIDQFVEPKNIYEEAISVSFKIDHPVYDAMYLVTSRRKNAKLLTMDNRLI
HHHHHHHHHHHHHHHCCCHHHHHHHHEEEEEECCCHHHHHHHHHCCCCCCEEEEECHHHH
KAASKLEIPVYDFN
HHHHHCCCEEEECC
>Mature Secondary Structure
MIITLDVSAAIEFIMGRKYQPFIKSKLEKADWIIAPTLFIYEASNVMWKYHSIKNYPQDK
CEEEEEHHHHHHHHHCCCCCHHHHHHHHHCCEEEECEEEEEECCCCEEEEHHHCCCCHHH
LLRKLRQILNIIDQFVEPKNIYEEAISVSFKIDHPVYDAMYLVTSRRKNAKLLTMDNRLI
HHHHHHHHHHHHHHHCCCHHHHHHHHEEEEEECCCHHHHHHHHHCCCCCCEEEEECHHHH
KAASKLEIPVYDFN
HHHHHCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA