| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220930871
Identifier: 220930871
GI number: 220930871
Start: 29641
End: 30039
Strand: Reverse
Name: 220930871
Synonym: Hore_00210
Alternate gene names: NA
Gene position: 30039-29641 (Counterclockwise)
Preceding gene: 220930872
Following gene: 220930864
Centisome position: 1.17
GC content: 30.08
Gene sequence:
>399_bases ATGAAAAAAATAAAATTCATTCCCAAAAAAGTAATCTTATATTTTTATGATCAACTTCTTCAAACCTATGGCGGTAAACA TGGTATTAGGGATGAAAAATTACTTGATTCTGCATTAGAACAACCTAAAGCAACATATGAAGGCAAATACTTACATGATA CTTTAATGGATATGGCTGCTGCTTATGGTTATCACTTATGTAATAATCATCCTTTTATAGACGGAAATAAAAGAATTGCC CTTGTAGCTATGGATGTTTTCCTCCAAAGAAATGGTTATGAAATTGTTGCATCAGAAAAAGAAACGTACAAAATAATGAT TAAATTATCAGCTGGCCAATTATCAAAAAAAGAATTGACAAAGTGGTTAGAAAAAAATACATCCCCATTGCAGGATTAA
Upstream 100 bases:
>100_bases GGTTTACCTTAACCCCTTTTGATCCAGAATTTGAAAATTGGGCCAGTGCTTTTGAAAAAACTAATAAAAAATTTAAAAAC ACATTAAGGGAATTATCAAA
Downstream 100 bases:
>100_bases AACTTCTGGTGAAAAAAACCCCAGGAGTTTTTTTATTAATTGTTATATCAGGCAAATGTCAGATAACGTTCCTAGGGTTT AAGAAGTTCATGAGCCTTAG
Product: death-on-curing family protein
Products: NA
Alternate protein names: Death On Curing Protein; Death-On-Curing Protein; Prophage Maintenance System Killer Protein; Xin-Antitoxin System Toxin Component Fic Family; Death-On-Curing Protein DOC; Phage Death On Curing Protein; Death On Curing xin Protein Doc; Doc Protein; Phage Maintenance Killer Protein; Addiction Module xin
Number of amino acids: Translated: 132; Mature: 132
Protein sequence:
>132_residues MKKIKFIPKKVILYFYDQLLQTYGGKHGIRDEKLLDSALEQPKATYEGKYLHDTLMDMAAAYGYHLCNNHPFIDGNKRIA LVAMDVFLQRNGYEIVASEKETYKIMIKLSAGQLSKKELTKWLEKNTSPLQD
Sequences:
>Translated_132_residues MKKIKFIPKKVILYFYDQLLQTYGGKHGIRDEKLLDSALEQPKATYEGKYLHDTLMDMAAAYGYHLCNNHPFIDGNKRIA LVAMDVFLQRNGYEIVASEKETYKIMIKLSAGQLSKKELTKWLEKNTSPLQD >Mature_132_residues MKKIKFIPKKVILYFYDQLLQTYGGKHGIRDEKLLDSALEQPKATYEGKYLHDTLMDMAAAYGYHLCNNHPFIDGNKRIA LVAMDVFLQRNGYEIVASEKETYKIMIKLSAGQLSKKELTKWLEKNTSPLQD
Specific function: Unknown
COG id: COG3654
COG function: function code R; Prophage maintenance system killer protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15262; Mature: 15262
Theoretical pI: Translated: 9.42; Mature: 9.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIKFIPKKVILYFYDQLLQTYGGKHGIRDEKLLDSALEQPKATYEGKYLHDTLMDMAA CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH AYGYHLCNNHPFIDGNKRIALVAMDVFLQRNGYEIVASEKETYKIMIKLSAGQLSKKELT HHHHHHCCCCCEECCCCEEEEEHHHHHHHCCCCEEEECCCCEEEEEEEECCCCCCHHHHH KWLEKNTSPLQD HHHHCCCCCCCC >Mature Secondary Structure MKKIKFIPKKVILYFYDQLLQTYGGKHGIRDEKLLDSALEQPKATYEGKYLHDTLMDMAA CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH AYGYHLCNNHPFIDGNKRIALVAMDVFLQRNGYEIVASEKETYKIMIKLSAGQLSKKELT HHHHHHCCCCCEECCCCEEEEEHHHHHHHCCCCEEEECCCCEEEEEEEECCCCCCHHHHH KWLEKNTSPLQD HHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA