| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220930866
Identifier: 220930866
GI number: 220930866
Start: 18276
End: 18533
Strand: Direct
Name: 220930866
Synonym: Hore_00160
Alternate gene names: NA
Gene position: 18276-18533 (Clockwise)
Preceding gene: 220930865
Following gene: 220930867
Centisome position: 0.71
GC content: 40.7
Gene sequence:
>258_bases ATGGGTTGGTTTTGCGCTCCCTACCGGGGCTTTGGAATGTTTGGTGGGTTTTTTGGGCTTTTAATAAATGGTTTGATAAT TGCTCTGATTATCTGGGTGGTTGTAAAGCTGGTCAAGGGAATTAATTTTAAAACCAATACCCGGGTGTATAAAGCAACTG GAAAGGGCGAGGCTCTGGAAATTGTAAAAGAAAGGTATGCCCGGGGGGAAATAACTAAAGAAGAATTCGAAAGAATGAAA AAAGATTTGGAGGAGTAA
Upstream 100 bases:
>100_bases TTAGTCAGGATTATTTTGAACCAGCAGGATAAATAGAATTGATAGGAGTGATTTATTACATTTCATGTTAAAAAATCAAT AGAAAGGAGGCAATATAGAT
Downstream 100 bases:
>100_bases TTTTAAATTATACCCTGCCTCTGTTCACTGGATAAGCACCTGATGAATAGTATATGGGTGATGATTTCCGGTGAAAAGGG GGTAGGGTTATTATGATTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 85; Mature: 84
Protein sequence:
>85_residues MGWFCAPYRGFGMFGGFFGLLINGLIIALIIWVVVKLVKGINFKTNTRVYKATGKGEALEIVKERYARGEITKEEFERMK KDLEE
Sequences:
>Translated_85_residues MGWFCAPYRGFGMFGGFFGLLINGLIIALIIWVVVKLVKGINFKTNTRVYKATGKGEALEIVKERYARGEITKEEFERMK KDLEE >Mature_84_residues GWFCAPYRGFGMFGGFFGLLINGLIIALIIWVVVKLVKGINFKTNTRVYKATGKGEALEIVKERYARGEITKEEFERMKK DLEE
Specific function: Unknown
COG id: COG3462
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9738; Mature: 9607
Theoretical pI: Translated: 9.88; Mature: 9.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGWFCAPYRGFGMFGGFFGLLINGLIIALIIWVVVKLVKGINFKTNTRVYKATGKGEALE CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHH IVKERYARGEITKEEFERMKKDLEE HHHHHHHCCCCCHHHHHHHHHHHCC >Mature Secondary Structure GWFCAPYRGFGMFGGFFGLLINGLIIALIIWVVVKLVKGINFKTNTRVYKATGKGEALE CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHH IVKERYARGEITKEEFERMKKDLEE HHHHHHHCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA