| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is 220919360
Identifier: 220919360
GI number: 220919360
Start: 4772090
End: 4773163
Strand: Direct
Name: 220919360
Synonym: A2cp1_4281
Alternate gene names: NA
Gene position: 4772090-4773163 (Clockwise)
Preceding gene: 220919359
Following gene: 220919361
Centisome position: 94.89
GC content: 70.76
Gene sequence:
>1074_bases ATGGGCACTGCGCGTGAACTCTCGGATCGGCTCGCCACCCTCCTACGCCGTGAGCGCTCGGCGCTCGCGGAGTTCCTGGT CGCGCTCGCGGGCTTCGACGCGAGGCGCGCGTGGGCGGAGCTGGGGTACGCCTCGCTCTTCCACTACCTGCATCGCGACC TCGGGCTGTCGAAGGGCTCGGCGCAGTACCGGAAGGTCGCGGCGGAGCTGATCCAGGCGGTCCCGGCCATCGTCGAACCG CTGCGGGACGGGCGGCTGTGCTTCACGACCATCATCGAGGTGGCGCGGGTCGTCACGGCGGAGAACTGGGAGACGGTGCT GCCTCGGTTCTTCGGGCTGTCGCGGCACGAGGCGACCGAGGTCGTCGCGGCGCTCGCGCCGCACCCGGCGCCGCCGGTGC GGACGGTGCTCACGGCGGTGCCTCGGGCGCCGGCTGGTTCAACTGTTGAACTGAATGTCCCTGCGGTGACTTTTGGTTCA ACTGTTGAACCGACGGGCACGACGGTGGCGTCCAGTTCAACTGTTGAACTGACCGCCGCGGCGCACTCTCCCCGCGGCGC GACGGTCACACCGCTCACCGCGACCCTTCAGCGGCTTCATGTCACGGTAAGCGAACGTTTCGGGCGCAAGCTTGAGCGGC TGCGCGATCTTCGCCCGGATCTCTCCGACGACGCGCTCCTCGAGGCCGCGGTGGATCTGCTGCTGGCGAAGGCGGAGAAG CGGAAGGGCGGCGGAGCTCGTTCCTCGGACCGGCCTCGTGCCTCGGTCCGGCCTTCCCGCGACCCAGGCTACATCCCTGC CCACGTTCGCCGGGAGGTCTGGCGGCGCGACGGTGGGTGCTGCCAGTGGCGGCTCGCCAACGGCGAGATCTGCGGCTCCA CGCATGCGCTGCAGCTCGACCACGTCGTGCCGCGCGCGCTGGGCGGGGAGTCCAGCGTGGGCAACCTTCGCGTGCTCTGC GCGGCGCACAACCTCGAGGCGGCGCGGCGGGTGTTCGGCGACGCGCTGATCGACGCGTACGCGCCGGGACGTCTGCACCG GGCTACCGCTCGTCCCGAGCCTGTCGAGGGATGA
Upstream 100 bases:
>100_bases TCGTTCCGAGCGCGTTTGCGACCCTGCCCTCCCCTTCGCGTGCCTGGCGCCGAATGCGTGCGTTCGGGGAGGGCCCGGAA ACGCGTGAGAGAGTGTCGAC
Downstream 100 bases:
>100_bases GCGGGCGCGGTGGACACCACGGGGCGCGCGTGCTGTCATGCCCGCCGCCATGGGTGGCATGGGCCGCACCGAGCTGTTCC TCGTCGTCCTGCTCGCGCTC
Product: HNH endonuclease
Products: NA
Alternate protein names: HNH Nuclease
Number of amino acids: Translated: 357; Mature: 356
Protein sequence:
>357_residues MGTARELSDRLATLLRRERSALAEFLVALAGFDARRAWAELGYASLFHYLHRDLGLSKGSAQYRKVAAELIQAVPAIVEP LRDGRLCFTTIIEVARVVTAENWETVLPRFFGLSRHEATEVVAALAPHPAPPVRTVLTAVPRAPAGSTVELNVPAVTFGS TVEPTGTTVASSSTVELTAAAHSPRGATVTPLTATLQRLHVTVSERFGRKLERLRDLRPDLSDDALLEAAVDLLLAKAEK RKGGGARSSDRPRASVRPSRDPGYIPAHVRREVWRRDGGCCQWRLANGEICGSTHALQLDHVVPRALGGESSVGNLRVLC AAHNLEAARRVFGDALIDAYAPGRLHRATARPEPVEG
Sequences:
>Translated_357_residues MGTARELSDRLATLLRRERSALAEFLVALAGFDARRAWAELGYASLFHYLHRDLGLSKGSAQYRKVAAELIQAVPAIVEP LRDGRLCFTTIIEVARVVTAENWETVLPRFFGLSRHEATEVVAALAPHPAPPVRTVLTAVPRAPAGSTVELNVPAVTFGS TVEPTGTTVASSSTVELTAAAHSPRGATVTPLTATLQRLHVTVSERFGRKLERLRDLRPDLSDDALLEAAVDLLLAKAEK RKGGGARSSDRPRASVRPSRDPGYIPAHVRREVWRRDGGCCQWRLANGEICGSTHALQLDHVVPRALGGESSVGNLRVLC AAHNLEAARRVFGDALIDAYAPGRLHRATARPEPVEG >Mature_356_residues GTARELSDRLATLLRRERSALAEFLVALAGFDARRAWAELGYASLFHYLHRDLGLSKGSAQYRKVAAELIQAVPAIVEPL RDGRLCFTTIIEVARVVTAENWETVLPRFFGLSRHEATEVVAALAPHPAPPVRTVLTAVPRAPAGSTVELNVPAVTFGST VEPTGTTVASSSTVELTAAAHSPRGATVTPLTATLQRLHVTVSERFGRKLERLRDLRPDLSDDALLEAAVDLLLAKAEKR KGGGARSSDRPRASVRPSRDPGYIPAHVRREVWRRDGGCCQWRLANGEICGSTHALQLDHVVPRALGGESSVGNLRVLCA AHNLEAARRVFGDALIDAYAPGRLHRATARPEPVEG
Specific function: Unknown
COG id: COG1403
COG function: function code V; Restriction endonuclease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38556; Mature: 38425
Theoretical pI: Translated: 9.80; Mature: 9.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTARELSDRLATLLRRERSALAEFLVALAGFDARRAWAELGYASLFHYLHRDLGLSKGS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCH AQYRKVAAELIQAVPAIVEPLRDGRLCFTTIIEVARVVTAENWETVLPRFFGLSRHEATE HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHH VVAALAPHPAPPVRTVLTAVPRAPAGSTVELNVPAVTFGSTVEPTGTTVASSSTVELTAA HHHHHCCCCCCHHHHHHHHCCCCCCCCEEEEECCEEECCCCCCCCCCEEECCCCEEEEEE AHSPRGATVTPLTATLQRLHVTVSERFGRKLERLRDLRPDLSDDALLEAAVDLLLAKAEK CCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH RKGGGARSSDRPRASVRPSRDPGYIPAHVRREVWRRDGGCCQWRLANGEICGSTHALQLD HCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEHH HVVPRALGGESSVGNLRVLCAAHNLEAARRVFGDALIDAYAPGRLHRATARPEPVEG HHHHHHCCCCCCCCCEEEEEEHHCHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCC >Mature Secondary Structure GTARELSDRLATLLRRERSALAEFLVALAGFDARRAWAELGYASLFHYLHRDLGLSKGS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCH AQYRKVAAELIQAVPAIVEPLRDGRLCFTTIIEVARVVTAENWETVLPRFFGLSRHEATE HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHH VVAALAPHPAPPVRTVLTAVPRAPAGSTVELNVPAVTFGSTVEPTGTTVASSSTVELTAA HHHHHCCCCCCHHHHHHHHCCCCCCCCEEEEECCEEECCCCCCCCCCEEECCCCEEEEEE AHSPRGATVTPLTATLQRLHVTVSERFGRKLERLRDLRPDLSDDALLEAAVDLLLAKAEK CCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH RKGGGARSSDRPRASVRPSRDPGYIPAHVRREVWRRDGGCCQWRLANGEICGSTHALQLD HCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEHH HVVPRALGGESSVGNLRVLCAAHNLEAARRVFGDALIDAYAPGRLHRATARPEPVEG HHHHHHCCCCCCCCCEEEEEEHHCHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA