| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is pepA [H]
Identifier: 220919326
GI number: 220919326
Start: 4729576
End: 4731132
Strand: Direct
Name: pepA [H]
Synonym: A2cp1_4247
Alternate gene names: 220919326
Gene position: 4729576-4731132 (Clockwise)
Preceding gene: 220919325
Following gene: 220919328
Centisome position: 94.04
GC content: 76.49
Gene sequence:
>1557_bases ATGTCCCGAGGCATCGAGCGGATCGCGGTGAAGGCGGCAGGGGCGGCGCCGGCGGAGGCGGAGGCCGACGCGCTGGCGCT GCCGGTGTTCGAGGACGAGGTCCGCGGCGCCGGGGCCGGCGCGGTGAAGGACCTCGACCGCCTGCTGGACGGCGCCCTCC TCGCCGCCGCCCGCGCCGAGCGGTTCGCCGGCAAGGCCGGCCAGGAGCTGTCGCTCGCGACGCTCGGACGCGCCCGGGCA GGCCGCGTGGTGCTCATGGGGATGGGGCCGCGCGCGAAGGCGCTCGAGGCCTGGGCGCGAGACGGGTACGAGGCGCTGCG GGCCGCCGCGGGCAAGGCGGCGCGCGGCGCGGGGAAGGCCGGCGCGCGCAGGCTCGCGCTCGCCGCGCCGGCGCTGGACG GGGACGCGCTCCCCGGCGCCGCCCGCGCGCTCGCCGAGGGCGCGCTCCTCGGCTCCTACCAGTTCACCCGCTACAAGAAG GACGATCCGGCGCGGCCGTCCGGCGTCGCCGAGGTGGCGGTGCTGGTGCCGCCGTCGCTGGAGCGCGCCCGCGCGGTGAA GGACGCGCTCGACGTCGCCCGCCGGATCGCGGGCGCGGTGGCCTGGGCGCGCGACCTCGTGAACCTGGGCCCGGCGGACT GCACGCCGGAGCTGCTCGCGCGCGCGGCCGCCGAGGTGGCGCGGCGCGCCGGCCTCGCGGTGGAGGTGCGCGGGCCGAAG GAGATCCAGGCGCTGAAGATGGGGATGTTCCTCGGCGTCACCCGCGGCTCCGCGGAGCCGCCGCGCCTCGTGAAGGTGAG CTGGATCCCGCGCGGCGCCGCCGGACGGAAGGCGCCGGTGGTGCTGGTGGGCAAGGCCATCACCTTCGACTCGGGCGGGC TCTCGCTGAAGCCCACCGAGAGCATGGTCACCATGAACACCGACATGGCGGGCAGCGCCGCGGTGCTCGGCGCGATGCAG GTGATCGCCGCGCTGAAGCCGCCGTTCCCGGTGCACGCGGTGCTGGGCGCCTGCGAGAACATGCCGGGCGGGCGCGCCTA CAAGCCGTCGGACGTGCTGGTGGCGCACGACGGGCAGACCGTCGAGATCACCAACACCGACGCGGAGGGGCGGCTGGTGC TCGGGGACGTCCTCTCCTGGGCGGCGGACACCCTGAAGCCCGCGGCGATGATCGACGTCGCCACGCTCACCGGCGCGTGC ATGGTGGCGCTCGGCAACGGCACCGCCGGCCTGTTCGGCCCGGAGGGCCCGGTCGCCGACGGCGTGCTCGCGGCCGCGCG CGCGGCCGGCGAGGACGTCTGGCGCCTGCCCATGACCGAGGCGCTGAAGGAGCAGCTCAAGAGCGACCGCGCCGACCTGA AGAACACCGGCGATCGCTGGGGCGGCGCCATCACCGCCGCGCACTTCCTCCACGCGTTCGCGAAGGAGACGCCCTGGGCG CACCTCGACATCGCCGGGCCTTCCCACACCGGGAAGGAGCAGGGCTACGTCGCGAAGGGCGCGACCGGGTTCGCGGTCCG CACGCTGGTCGAGTTCGTGCGCGCCTGGAAGGCGTGA
Upstream 100 bases:
>100_bases CGGCGCGCCGGAGGCGGCCGAGGCCGTCCGCCGCATCGAGGCGGCGCAGTAGCCCTCGCCGTGCTAAACGACGCCTCCAC ACACCCGTGGAGGAGCACGC
Downstream 100 bases:
>100_bases GCGGCAGCATTCACGGTTCGTGATCGCGGCCGCCCGGGCCCGGCCCGGCGCGCCGCGATCACTCCGCGAGCGGCGCGTCC TCGGTGCCGGCCGCGTCCGG
Product: Leucyl aminopeptidase
Products: NA
Alternate protein names: Leucine aminopeptidase; LAP; Leucyl aminopeptidase [H]
Number of amino acids: Translated: 518; Mature: 517
Protein sequence:
>518_residues MSRGIERIAVKAAGAAPAEAEADALALPVFEDEVRGAGAGAVKDLDRLLDGALLAAARAERFAGKAGQELSLATLGRARA GRVVLMGMGPRAKALEAWARDGYEALRAAAGKAARGAGKAGARRLALAAPALDGDALPGAARALAEGALLGSYQFTRYKK DDPARPSGVAEVAVLVPPSLERARAVKDALDVARRIAGAVAWARDLVNLGPADCTPELLARAAAEVARRAGLAVEVRGPK EIQALKMGMFLGVTRGSAEPPRLVKVSWIPRGAAGRKAPVVLVGKAITFDSGGLSLKPTESMVTMNTDMAGSAAVLGAMQ VIAALKPPFPVHAVLGACENMPGGRAYKPSDVLVAHDGQTVEITNTDAEGRLVLGDVLSWAADTLKPAAMIDVATLTGAC MVALGNGTAGLFGPEGPVADGVLAAARAAGEDVWRLPMTEALKEQLKSDRADLKNTGDRWGGAITAAHFLHAFAKETPWA HLDIAGPSHTGKEQGYVAKGATGFAVRTLVEFVRAWKA
Sequences:
>Translated_518_residues MSRGIERIAVKAAGAAPAEAEADALALPVFEDEVRGAGAGAVKDLDRLLDGALLAAARAERFAGKAGQELSLATLGRARA GRVVLMGMGPRAKALEAWARDGYEALRAAAGKAARGAGKAGARRLALAAPALDGDALPGAARALAEGALLGSYQFTRYKK DDPARPSGVAEVAVLVPPSLERARAVKDALDVARRIAGAVAWARDLVNLGPADCTPELLARAAAEVARRAGLAVEVRGPK EIQALKMGMFLGVTRGSAEPPRLVKVSWIPRGAAGRKAPVVLVGKAITFDSGGLSLKPTESMVTMNTDMAGSAAVLGAMQ VIAALKPPFPVHAVLGACENMPGGRAYKPSDVLVAHDGQTVEITNTDAEGRLVLGDVLSWAADTLKPAAMIDVATLTGAC MVALGNGTAGLFGPEGPVADGVLAAARAAGEDVWRLPMTEALKEQLKSDRADLKNTGDRWGGAITAAHFLHAFAKETPWA HLDIAGPSHTGKEQGYVAKGATGFAVRTLVEFVRAWKA >Mature_517_residues SRGIERIAVKAAGAAPAEAEADALALPVFEDEVRGAGAGAVKDLDRLLDGALLAAARAERFAGKAGQELSLATLGRARAG RVVLMGMGPRAKALEAWARDGYEALRAAAGKAARGAGKAGARRLALAAPALDGDALPGAARALAEGALLGSYQFTRYKKD DPARPSGVAEVAVLVPPSLERARAVKDALDVARRIAGAVAWARDLVNLGPADCTPELLARAAAEVARRAGLAVEVRGPKE IQALKMGMFLGVTRGSAEPPRLVKVSWIPRGAAGRKAPVVLVGKAITFDSGGLSLKPTESMVTMNTDMAGSAAVLGAMQV IAALKPPFPVHAVLGACENMPGGRAYKPSDVLVAHDGQTVEITNTDAEGRLVLGDVLSWAADTLKPAAMIDVATLTGACM VALGNGTAGLFGPEGPVADGVLAAARAAGEDVWRLPMTEALKEQLKSDRADLKNTGDRWGGAITAAHFLHAFAKETPWAH LDIAGPSHTGKEQGYVAKGATGFAVRTLVEFVRAWKA
Specific function: Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides [H]
COG id: COG0260
COG function: function code E; Leucyl aminopeptidase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M17 family [H]
Homologues:
Organism=Homo sapiens, GI41393561, Length=493, Percent_Identity=35.9026369168357, Blast_Score=233, Evalue=4e-61, Organism=Homo sapiens, GI47155554, Length=296, Percent_Identity=36.1486486486487, Blast_Score=138, Evalue=1e-32, Organism=Escherichia coli, GI1790710, Length=482, Percent_Identity=39.2116182572614, Blast_Score=280, Evalue=2e-76, Organism=Escherichia coli, GI87082123, Length=360, Percent_Identity=37.7777777777778, Blast_Score=176, Evalue=4e-45, Organism=Caenorhabditis elegans, GI17556903, Length=299, Percent_Identity=32.4414715719064, Blast_Score=117, Evalue=2e-26, Organism=Caenorhabditis elegans, GI17565172, Length=336, Percent_Identity=26.4880952380952, Blast_Score=80, Evalue=3e-15, Organism=Drosophila melanogaster, GI20129969, Length=481, Percent_Identity=31.1850311850312, Blast_Score=199, Evalue=5e-51, Organism=Drosophila melanogaster, GI24662227, Length=421, Percent_Identity=30.166270783848, Blast_Score=186, Evalue=3e-47, Organism=Drosophila melanogaster, GI24661038, Length=444, Percent_Identity=29.954954954955, Blast_Score=177, Evalue=2e-44, Organism=Drosophila melanogaster, GI161077148, Length=474, Percent_Identity=31.2236286919831, Blast_Score=176, Evalue=3e-44, Organism=Drosophila melanogaster, GI20130057, Length=474, Percent_Identity=31.2236286919831, Blast_Score=176, Evalue=3e-44, Organism=Drosophila melanogaster, GI21355645, Length=422, Percent_Identity=30.8056872037915, Blast_Score=175, Evalue=5e-44, Organism=Drosophila melanogaster, GI24662223, Length=422, Percent_Identity=30.8056872037915, Blast_Score=175, Evalue=5e-44, Organism=Drosophila melanogaster, GI21355725, Length=443, Percent_Identity=29.7968397291196, Blast_Score=173, Evalue=2e-43, Organism=Drosophila melanogaster, GI20129963, Length=421, Percent_Identity=30.6413301662708, Blast_Score=159, Evalue=3e-39, Organism=Drosophila melanogaster, GI19922386, Length=419, Percent_Identity=29.3556085918854, Blast_Score=151, Evalue=1e-36, Organism=Drosophila melanogaster, GI21357381, Length=342, Percent_Identity=32.1637426900585, Blast_Score=136, Evalue=4e-32, Organism=Drosophila melanogaster, GI221379063, Length=342, Percent_Identity=32.1637426900585, Blast_Score=136, Evalue=4e-32, Organism=Drosophila melanogaster, GI221379062, Length=342, Percent_Identity=32.1637426900585, Blast_Score=136, Evalue=4e-32, Organism=Drosophila melanogaster, GI24646701, Length=155, Percent_Identity=34.8387096774194, Blast_Score=80, Evalue=4e-15, Organism=Drosophila melanogaster, GI24646703, Length=155, Percent_Identity=34.8387096774194, Blast_Score=80, Evalue=4e-15, Organism=Drosophila melanogaster, GI21358201, Length=155, Percent_Identity=34.8387096774194, Blast_Score=80, Evalue=4e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011356 - InterPro: IPR000819 - InterPro: IPR023042 - InterPro: IPR008283 [H]
Pfam domain/function: PF00883 Peptidase_M17; PF02789 Peptidase_M17_N [H]
EC number: =3.4.11.1; =3.4.11.10 [H]
Molecular weight: Translated: 53279; Mature: 53148
Theoretical pI: Translated: 9.82; Mature: 9.82
Prosite motif: PS00631 CYTOSOL_AP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRGIERIAVKAAGAAPAEAEADALALPVFEDEVRGAGAGAVKDLDRLLDGALLAAARAE CCCCHHHHEEEECCCCCCCCCCCEEEECCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH RFAGKAGQELSLATLGRARAGRVVLMGMGPRAKALEAWARDGYEALRAAAGKAARGAGKA HHHCCCCCCEEHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCHHHCCCCCH GARRLALAAPALDGDALPGAARALAEGALLGSYQFTRYKKDDPARPSGVAEVAVLVPPSL HHHEEEEECCCCCCCCCCHHHHHHHHCHHCCCEEEEEECCCCCCCCCCCEEEEEECCCCH ERARAVKDALDVARRIAGAVAWARDLVNLGPADCTPELLARAAAEVARRAGLAVEVRGPK HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCH EIQALKMGMFLGVTRGSAEPPRLVKVSWIPRGAAGRKAPVVLVGKAITFDSGGLSLKPTE HHHHHHHHHHEEEECCCCCCCCEEEEEECCCCCCCCCCCEEEEEEEEEECCCCCEECCCC SMVTMNTDMAGSAAVLGAMQVIAALKPPFPVHAVLGACENMPGGRAYKPSDVLVAHDGQT CEEEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCEEEECCCCE VEITNTDAEGRLVLGDVLSWAADTLKPAAMIDVATLTGACMVALGNGTAGLFGPEGPVAD EEEECCCCCCCEEHHHHHHHHHHHCCCHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCHH GVLAAARAAGEDVWRLPMTEALKEQLKSDRADLKNTGDRWGGAITAAHFLHAFAKETPWA HHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHCCCCHHCHHHHHHHHHHHHHHCCCCE HLDIAGPSHTGKEQGYVAKGATGFAVRTLVEFVRAWKA EEEECCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure SRGIERIAVKAAGAAPAEAEADALALPVFEDEVRGAGAGAVKDLDRLLDGALLAAARAE CCCHHHHEEEECCCCCCCCCCCEEEECCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH RFAGKAGQELSLATLGRARAGRVVLMGMGPRAKALEAWARDGYEALRAAAGKAARGAGKA HHHCCCCCCEEHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCHHHCCCCCH GARRLALAAPALDGDALPGAARALAEGALLGSYQFTRYKKDDPARPSGVAEVAVLVPPSL HHHEEEEECCCCCCCCCCHHHHHHHHCHHCCCEEEEEECCCCCCCCCCCEEEEEECCCCH ERARAVKDALDVARRIAGAVAWARDLVNLGPADCTPELLARAAAEVARRAGLAVEVRGPK HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCH EIQALKMGMFLGVTRGSAEPPRLVKVSWIPRGAAGRKAPVVLVGKAITFDSGGLSLKPTE HHHHHHHHHHEEEECCCCCCCCEEEEEECCCCCCCCCCCEEEEEEEEEECCCCCEECCCC SMVTMNTDMAGSAAVLGAMQVIAALKPPFPVHAVLGACENMPGGRAYKPSDVLVAHDGQT CEEEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCEEEECCCCE VEITNTDAEGRLVLGDVLSWAADTLKPAAMIDVATLTGACMVALGNGTAGLFGPEGPVAD EEEECCCCCCCEEHHHHHHHHHHHCCCHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCHH GVLAAARAAGEDVWRLPMTEALKEQLKSDRADLKNTGDRWGGAITAAHFLHAFAKETPWA HHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHCCCCHHCHHHHHHHHHHHHHHCCCCE HLDIAGPSHTGKEQGYVAKGATGFAVRTLVEFVRAWKA EEEECCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA