Click here to switch to the map view.

The map label for this gene is yiaD [C]

Identifier: 220919231

GI number: 220919231

Start: 4637818

End: 4638891

Strand: Direct

Name: yiaD [C]

Synonym: A2cp1_4152

Alternate gene names: 220919231

Gene position: 4637818-4638891 (Clockwise)

Preceding gene: 220919222

Following gene: 220919232

Centisome position: 92.22

GC content: 81.1

Gene sequence:

>1074_bases
ATGCGCCCGGCCGCCGCAGCCCTGCTCCTGCCCGCCCTCGCCTGCGCCGCCGGCGCGCGGCCCCCGTCCGCGCTGGGCGC
CGCGGACGCCGGGCCGAGCCGCTGCCTGCTCCTGGCGCCGTTCGAGAACGCCAGCGACGCGCCGCACGCCGGCGAGGCGG
CCACCGCCGCGGTGCGGGCCGCGCTCGATCCCGCCCGGACCGCCGCGCTCGCCGACGACGACCTGCGCGCGCTGTTCCGC
GAGACGCCGCTCGAGCTTCCGGAGGGCGTCTCCCCCTCGCTCGCGCTCGAGCTCGCCGAGCTGACCGGCGCGGACGCGGC
GGTCTACGGCACGGTGGAGGGCCGCTCGCGCGACGCGGCCGCGCCCACCCTGCTCGTGTCGCTGCGCGTGGTCGACGCCG
GCCGCCGCGAGCTGCTGGTGGCCGAGACGGTCCCGGTCCGCCCCGCCGCCGGCGAGGCGCCCGAGGACGCCATCCGGCGC
GCCCTCGCCGCGGCGCGCCCGGCGCTGGCGCGCCTCGGGGACGCCTCGGGGCGCCGCTGCTTCGACCCGGCCCGCCTCGG
CGCGCTTCGCGGCGTGGCGATGGCCGAGGTGCGCCGCCAGCCCGCGCCGGCGCCGGCCGCCGTGGTGGTGCCGGTCGCCG
CCGCGGCGATGCCGGCGGCGCCCGGGCCCGCGGCGGAGCCGGCGGGCACGCGCACGCCGCGGCAGGCGGACTGGGCGCGG
CGACTTGCCGCAGGGGAGCGCTTCCTGCTCGAGGACGCCTCCTTCGCCGGACGGACCGCGGAGCTCCAGCGCGACGGCGG
CCTGGCCGACCTCGTGCTCGCGCTCGCCGCCGCGCCGGGTGTGGCGGTCCGGGTCGAGGCGTTCGTGGACGCCACGCCCG
ACGCGCAGGCCGACCAGCGCCTCTCGCAGGCCATGGCCGACGCGGCCGTCGGGCGCCTGCGCGAGCTGGGCGTGGCCGAA
CGACGTCTCTCCGGGGTCGGATGCGGCGGGGAGCGCCCGCTCCTCCCCAACTTCACCGTTCGTGGACGTACCGCGAACCG
GCGTCTCGAGATCGTGGGGCACGCCGAGCCGTGA

Upstream 100 bases:

>100_bases
GGACGTCACGCCCACACCTTAACGCAGGGCCGGGTGACGGGCGCGTGGCGGCCGTGCCACGGAAAGGTGAAGTCGACGCC
GGCGGGGGTAGGATGGCGGG

Downstream 100 bases:

>100_bases
CGGCGGGCGCAGCCGGTCGTCCCTTGGCTGCGGGGGAGGTAGCATCGGACGCGTGGAAGCCAGTCAGCCGGGCCGGACGC
CAGCGGTGATGGCGCTCGCG

Product: OmpA/MotB domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 357; Mature: 357

Protein sequence:

>357_residues
MRPAAAALLLPALACAAGARPPSALGAADAGPSRCLLLAPFENASDAPHAGEAATAAVRAALDPARTAALADDDLRALFR
ETPLELPEGVSPSLALELAELTGADAAVYGTVEGRSRDAAAPTLLVSLRVVDAGRRELLVAETVPVRPAAGEAPEDAIRR
ALAAARPALARLGDASGRRCFDPARLGALRGVAMAEVRRQPAPAPAAVVVPVAAAAMPAAPGPAAEPAGTRTPRQADWAR
RLAAGERFLLEDASFAGRTAELQRDGGLADLVLALAAAPGVAVRVEAFVDATPDAQADQRLSQAMADAAVGRLRELGVAE
RRLSGVGCGGERPLLPNFTVRGRTANRRLEIVGHAEP

Sequences:

>Translated_357_residues
MRPAAAALLLPALACAAGARPPSALGAADAGPSRCLLLAPFENASDAPHAGEAATAAVRAALDPARTAALADDDLRALFR
ETPLELPEGVSPSLALELAELTGADAAVYGTVEGRSRDAAAPTLLVSLRVVDAGRRELLVAETVPVRPAAGEAPEDAIRR
ALAAARPALARLGDASGRRCFDPARLGALRGVAMAEVRRQPAPAPAAVVVPVAAAAMPAAPGPAAEPAGTRTPRQADWAR
RLAAGERFLLEDASFAGRTAELQRDGGLADLVLALAAAPGVAVRVEAFVDATPDAQADQRLSQAMADAAVGRLRELGVAE
RRLSGVGCGGERPLLPNFTVRGRTANRRLEIVGHAEP
>Mature_357_residues
MRPAAAALLLPALACAAGARPPSALGAADAGPSRCLLLAPFENASDAPHAGEAATAAVRAALDPARTAALADDDLRALFR
ETPLELPEGVSPSLALELAELTGADAAVYGTVEGRSRDAAAPTLLVSLRVVDAGRRELLVAETVPVRPAAGEAPEDAIRR
ALAAARPALARLGDASGRRCFDPARLGALRGVAMAEVRRQPAPAPAAVVVPVAAAAMPAAPGPAAEPAGTRTPRQADWAR
RLAAGERFLLEDASFAGRTAELQRDGGLADLVLALAAAPGVAVRVEAFVDATPDAQADQRLSQAMADAAVGRLRELGVAE
RRLSGVGCGGERPLLPNFTVRGRTANRRLEIVGHAEP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Attached To The Membrane By A Lipid Anchor [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36400; Mature: 36400

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPAAAALLLPALACAAGARPPSALGAADAGPSRCLLLAPFENASDAPHAGEAATAAVRA
CCHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHH
ALDPARTAALADDDLRALFRETPLELPEGVSPSLALELAELTGADAAVYGTVEGRSRDAA
HHCHHHHHHHCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCC
APTLLVSLRVVDAGRRELLVAETVPVRPAAGEAPEDAIRRALAAARPALARLGDASGRRC
CCEEEEEEEEECCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
FDPARLGALRGVAMAEVRRQPAPAPAAVVVPVAAAAMPAAPGPAAEPAGTRTPRQADWAR
CCHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHH
RLAAGERFLLEDASFAGRTAELQRDGGLADLVLALAAAPGVAVRVEAFVDATPDAQADQR
HHHCCCEEEEECCCCCCCCHHHHHCCCHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHH
LSQAMADAAVGRLRELGVAERRLSGVGCGGERPLLPNFTVRGRTANRRLEIVGHAEP
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCEEEEEECCCC
>Mature Secondary Structure
MRPAAAALLLPALACAAGARPPSALGAADAGPSRCLLLAPFENASDAPHAGEAATAAVRA
CCHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHH
ALDPARTAALADDDLRALFRETPLELPEGVSPSLALELAELTGADAAVYGTVEGRSRDAA
HHCHHHHHHHCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCC
APTLLVSLRVVDAGRRELLVAETVPVRPAAGEAPEDAIRRALAAARPALARLGDASGRRC
CCEEEEEEEEECCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
FDPARLGALRGVAMAEVRRQPAPAPAAVVVPVAAAAMPAAPGPAAEPAGTRTPRQADWAR
CCHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHH
RLAAGERFLLEDASFAGRTAELQRDGGLADLVLALAAAPGVAVRVEAFVDATPDAQADQR
HHHCCCEEEEECCCCCCCCHHHHHCCCHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHH
LSQAMADAAVGRLRELGVAERRLSGVGCGGERPLLPNFTVRGRTANRRLEIVGHAEP
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA