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The map label for this gene is hyfE [C]

Identifier: 220918884

GI number: 220918884

Start: 4219845

End: 4220492

Strand: Direct

Name: hyfE [C]

Synonym: A2cp1_3798

Alternate gene names: 220918884

Gene position: 4219845-4220492 (Clockwise)

Preceding gene: 220918883

Following gene: 220918885

Centisome position: 83.9

GC content: 70.06

Gene sequence:

>648_bases
GTGACCTCCCTCACCGACCTCGTCTTCATCCTCGTCGTCGTCATCGACTTCTTCCTGCTCGCCTCGAGCCGGCTCGGCGC
CGCCATCCGCGCGGTCGCCACGCAGGGGGCGCTGCTCGCGGCCCTGCCGCTGCTGCTGCTGGAGGGCGGGCACCAGGTCG
GCCACGTGCTGCTGCTCGCGGTCGGGGCGCTCGCCATCAAGGGCGCGCTCATCCCCTGGCTCATGTTCCGCGCCATCCGC
GAGGCCTCCATCCGGCGCGAGATGGAGCCCATCGTCGGCTTCGTCCCGTCGATGGTGCTGGGCGGCATCGGGGTGGCGCT
CGCGTTCGCGTTCTCGAGCCGCCTGCCGCTCCCGGGCGGCGAGGCGCACCCGTACCTGGTCCCGACGGCGCTCTCGACGG
TGTGGGCCGGGATGCTGCTGGTGGTCTCGCGCCGGAAGGCCGTCAACCAGGTGCTGGGCTTCCTGGTGCTGGAGAACGGC
GTCTACGTCTTCGGCCTGCTGCTCACCGGGATCATGCCGGTGATGGTGGAGGCGGGCGTGCTGCTCGACCTGTTCGCCGC
CGTGTTCGTCATGGGCATCGTCATGTTCCACATCAACCGCGAGTTCGCCTCGCTCGACACCGAGAAGCTCTCGGCGCTGA
AGGACTGA

Upstream 100 bases:

>100_bases
TCGGTGATGGCGCGGCTGCGCATCGTGCGCGTGCCGCAGCTCCTGGTGGGCGCCTCGGTGCTGTCCGCCTTCGCCCTGGT
CCTCCTGCTCCGGTGACCCC

Downstream 100 bases:

>100_bases
CCGCGCATGGTGCTCCTCATCGCCGCCCCGCTCGCGCTCGCGCTGGTCGCGTTCGCGATGCCCTCCGCCCGGCGCCGCCC
GCTGGTGCTCCTCGCCGGTG

Product: NAD-dependent dehydrogenase subunit

Products: H2; oxidized ferredoxin [C]

Alternate protein names: NA

Number of amino acids: Translated: 215; Mature: 214

Protein sequence:

>215_residues
MTSLTDLVFILVVVIDFFLLASSRLGAAIRAVATQGALLAALPLLLLEGGHQVGHVLLLAVGALAIKGALIPWLMFRAIR
EASIRREMEPIVGFVPSMVLGGIGVALAFAFSSRLPLPGGEAHPYLVPTALSTVWAGMLLVVSRRKAVNQVLGFLVLENG
VYVFGLLLTGIMPVMVEAGVLLDLFAAVFVMGIVMFHINREFASLDTEKLSALKD

Sequences:

>Translated_215_residues
MTSLTDLVFILVVVIDFFLLASSRLGAAIRAVATQGALLAALPLLLLEGGHQVGHVLLLAVGALAIKGALIPWLMFRAIR
EASIRREMEPIVGFVPSMVLGGIGVALAFAFSSRLPLPGGEAHPYLVPTALSTVWAGMLLVVSRRKAVNQVLGFLVLENG
VYVFGLLLTGIMPVMVEAGVLLDLFAAVFVMGIVMFHINREFASLDTEKLSALKD
>Mature_214_residues
TSLTDLVFILVVVIDFFLLASSRLGAAIRAVATQGALLAALPLLLLEGGHQVGHVLLLAVGALAIKGALIPWLMFRAIRE
ASIRREMEPIVGFVPSMVLGGIGVALAFAFSSRLPLPGGEAHPYLVPTALSTVWAGMLLVVSRRKAVNQVLGFLVLENGV
YVFGLLLTGIMPVMVEAGVLLDLFAAVFVMGIVMFHINREFASLDTEKLSALKD

Specific function: Unknown

COG id: COG4237

COG function: function code C; Hydrogenase 4 membrane component (E)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.-.-.- [C]

Molecular weight: Translated: 22875; Mature: 22744

Theoretical pI: Translated: 7.85; Mature: 7.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSLTDLVFILVVVIDFFLLASSRLGAAIRAVATQGALLAALPLLLLEGGHQVGHVLLLA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHH
VGALAIKGALIPWLMFRAIREASIRREMEPIVGFVPSMVLGGIGVALAFAFSSRLPLPGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
EAHPYLVPTALSTVWAGMLLVVSRRKAVNQVLGFLVLENGVYVFGLLLTGIMPVMVEAGV
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
LLDLFAAVFVMGIVMFHINREFASLDTEKLSALKD
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCC
>Mature Secondary Structure 
TSLTDLVFILVVVIDFFLLASSRLGAAIRAVATQGALLAALPLLLLEGGHQVGHVLLLA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHH
VGALAIKGALIPWLMFRAIREASIRREMEPIVGFVPSMVLGGIGVALAFAFSSRLPLPGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
EAHPYLVPTALSTVWAGMLLVVSRRKAVNQVLGFLVLENGVYVFGLLLTGIMPVMVEAGV
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
LLDLFAAVFVMGIVMFHINREFASLDTEKLSALKD
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton; reduced ferredoxin [C]

Specific reaction: Proton + reduced ferredoxin = H2 + oxidized ferredoxin [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]