| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is 220918866
Identifier: 220918866
GI number: 220918866
Start: 4196616
End: 4199462
Strand: Direct
Name: 220918866
Synonym: A2cp1_3780
Alternate gene names: NA
Gene position: 4196616-4199462 (Clockwise)
Preceding gene: 220918857
Following gene: 220918868
Centisome position: 83.44
GC content: 78.22
Gene sequence:
>2847_bases ATGAAGCCCACCCGCCGTCCCATGCTCGCCCTGCTCCTCGCGGCGGCCGCCTGCTCCGGTGGCGGCGGCGACGACACCCC GGTCGCCCTGCCGGTGACGGTCTCCGCCACGCCGGCGCTCGTGAAGGCGGACGGTGCGGCGACGGTCACCGTCCACGTGC GCGCCGGCAAGGGACCGGTCGCGGTGGTGGCGAGCCGCGGCACGTTCCTCGGCACCGGCACCAGCACCGCCACGCTCGCC GCGGCCGAGGGCGACCTCACGCTCGTCACCTGCGACCAGCGCCTCGACCCGGCGTGCTGGGGGCCGGTGTCGGTGACCGC CTCCGACGCGTCGCTGGCGTACGGCCTGGCGCAGGTCACGTTCGTCGGCGCCGAGGTCTGCGACAACGGCGTGCCGGACG CCGGCAACCCGGCGGCGGACTGCGCCGCGGCCGAGTGCGCGGGCGCGACCTGTCGCACCGGCACCGGGGCGGTGGGGACC TGCGCCGGCGGCGCGTGCACGTGCACGCCCGACGCCGGGCAGGCGGGCGGCGAGACCGCCTGCGACGACGCGCGCGACAA CGACTGCGACGGCGGGGTGGACTGCGCCGACACCGGGTGCGCCGGGCGCCGCTGCCTGGCCGCGGGCGGCGCGGTGGGCG CCTGCGCCCAGGGCGCGTGCGTCTGCACGCCCGCGTCGGCCAGCGAGGTCGCCTGCGGCGACGGGCGGGACGACGACTGC GACGGCCGGGTGGACTGCGAGGACGCCGACTGCGGCGGCGCCACCTGCGCCACCGCCGACGGACGGGCGGGCGCGTGCGC GGGCGGCGCCTGCGCGCCGGTCGCCTGCGACGCCACCGAGACGGCCGAGGTCTCCTGCGCGAACCGGCTCGACGACGACT GCGACGGCCTGGTGGACTGCGCCGAGGCCGCCTGCGACGGGCAGGCGTGCGACGCGGCCGCCGGCGCGCGCTGGGCCTGC CGCAACCGCCGCTGCACCGACCTCGCCTCCGGCGTGGCGCTCGGGCTCGCCCCGGCGCGCACCCGCATCCCGGCCGACGG CCGCGCCACCACCGCCGTCACGGTGACGCTCGCGCGCGACGGCGTGCCCGCGGCCGGCGAGCAGGTGGTGCTGTCCACCA CGCTGGGCGCGTTCCGGGCCGAGGCCGGCCCGGCCGCGACCGTGACCGTGATCACGGACGGCGCCGGCGTGGCGGCGGCC ACCTTCGTCTCCGCCGCGCAGGGCGGCACCGCGCTCCTCACCGCCCGGCTGGCGGCCGCACCGGTCGAGACCACCGCGTC GGTGCGCATGCCGGCGCTGGCGCAGATCTCGGCCCAGCCCGCGCCGGCCTACCCGGTGATGGGCGTTCGCGACTCCGGCT GGAACGAGGCGAACGCGGTCACGTTCACCCTGACGGGCGACGACGGCCTCGCCTACCCGGACGGCCTGGAGGTCTACCTG GAGCACCCGCGGCTGGGCGGCTCCGACCTGCACGGCGCGATGCCGTGCGCCGTGCCCGGCCCGGCGTGCAGCGCGGTGCA CACCGCGATCATGTCCGGCGGCGCCCCGCCGGACACGCTCGGCCAGGCCCGCGTCACGCTGCAGTCCGGCACGGTGGCCG GCACGCTCACGGTGACCGCGACCGCCACCGCCGGCGGCCAGACCCGCTCGGCCCTGCTCCAGCCCGGTGTGGCCGTGGTC GGCGCGCGCGCCAGCGCCGGCGCGTTCACGCTGGTGTGCAGCCCCCACAACGTGGAGGCGCTCGCCGCCACGGACTGCGG CGCGTCGCTGGTGGACGCGGCGTTCACCTGCGTCGCGGTGTTGCAGGACCGCTACCAGAACGTGCTCGGGCGCGAGACCG CGGTGACGTTCCTCTCGGAGGCGAGCCGCGCCGCCGTGGCGCGCACCACGCCCGCGTACCAGCCCGGCATGGACCCGTCC GCCCAGCGGGACCTCGGCCTCGCGTCGGGCCTGTTCGCGACGCTGGGCGGCTACCTGCCCGAGGACGTGGCGCCGCGCCC GGACGAGCCGTCGGTGACCTACGCCGACGCCTGCGGCACGCGCACCCACAACCCGCGCGACGGGCTCGTCGCGGTGATCG CGGTCGCCGACGGAGAGGAGGCGTTCACCGACCTCGACGGCGACGGCCGCCACGGCGCGGGTGAGCCGTTCGTGGATCTG CCCGAGCCGTTCGTGGACGCCGACGACGACGGGCAGCACGATCCCGGCGAGGCGTTCGTGGACGTGGACGGCTCGGGCGA CTGGACCGCGGCGAACGGGCGCTGGGACGCGCTCACGAAGATCTGGACGCAGACGGTGGTGCTGTTCACCGGCGCCCCGC TGCCGGCCGTCCCCGCGCCGGGCGGCGCGGGCCTGCTCGGCACCCGCTGGGCGGCGCTCCCCGCCGCCGGCGAGGGGGCG TGCACGCCGACCGCCCCGGCGGCGCCGTTCACGCTCACCGCCGGCGACCCGCCCTCGCGCGCCACCTACGCGGTCTACGC CGCGGACGTGAACCTGAACCTGCTCCCGGCGGCCACCTCCTACGCCGTCGCGGTGCGCGCCCCCTCCAAGATCTCCGCCG CCTACCGTGGGCTCGACGCCTACCCGGACGGCCGCGGCCTCGAGTTCACGTACCAGCCGTGCAACGCAGCCAGCGCGTGC GGGACGCGCTGCCCGGTGGGCAGCGTGGGGCCCTGCCGGATGGTGGCGCGGCTCGGCGGGTTCACCTGCGGCGTGGGCGC GTCGGTGACGCTCACGGCGGGCAGCGAGGCGGACCCCTACGCGCCGAGCGAGGTGGACTGGATCGTGGATGCCCCCATCC CGCTCCCGCTGGAGCTCCCGATCACCGGCACCAGCGCCGCGCCCTGA
Upstream 100 bases:
>100_bases GCGCGCGCCGGCGTTCCGTGGTGTGGAGCACGTTCACCAGAAGTCGCAGTCACCGCCGGCGAAGGCCGGCCTCCGCCACC CTCGCCGACCGGAGCCCTCC
Downstream 100 bases:
>100_bases TCCGATGGTCCGCTCCGGGCCCGTCCGCGGGCCCGGGGCGGGCGCCGGTCAGGAAGGGCGGGCCGGCGCGGCCAGCTGCA CCACCGCCGGCTCGAGCTCG
Product: LigA
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 948; Mature: 948
Protein sequence:
>948_residues MKPTRRPMLALLLAAAACSGGGGDDTPVALPVTVSATPALVKADGAATVTVHVRAGKGPVAVVASRGTFLGTGTSTATLA AAEGDLTLVTCDQRLDPACWGPVSVTASDASLAYGLAQVTFVGAEVCDNGVPDAGNPAADCAAAECAGATCRTGTGAVGT CAGGACTCTPDAGQAGGETACDDARDNDCDGGVDCADTGCAGRRCLAAGGAVGACAQGACVCTPASASEVACGDGRDDDC DGRVDCEDADCGGATCATADGRAGACAGGACAPVACDATETAEVSCANRLDDDCDGLVDCAEAACDGQACDAAAGARWAC RNRRCTDLASGVALGLAPARTRIPADGRATTAVTVTLARDGVPAAGEQVVLSTTLGAFRAEAGPAATVTVITDGAGVAAA TFVSAAQGGTALLTARLAAAPVETTASVRMPALAQISAQPAPAYPVMGVRDSGWNEANAVTFTLTGDDGLAYPDGLEVYL EHPRLGGSDLHGAMPCAVPGPACSAVHTAIMSGGAPPDTLGQARVTLQSGTVAGTLTVTATATAGGQTRSALLQPGVAVV GARASAGAFTLVCSPHNVEALAATDCGASLVDAAFTCVAVLQDRYQNVLGRETAVTFLSEASRAAVARTTPAYQPGMDPS AQRDLGLASGLFATLGGYLPEDVAPRPDEPSVTYADACGTRTHNPRDGLVAVIAVADGEEAFTDLDGDGRHGAGEPFVDL PEPFVDADDDGQHDPGEAFVDVDGSGDWTAANGRWDALTKIWTQTVVLFTGAPLPAVPAPGGAGLLGTRWAALPAAGEGA CTPTAPAAPFTLTAGDPPSRATYAVYAADVNLNLLPAATSYAVAVRAPSKISAAYRGLDAYPDGRGLEFTYQPCNAASAC GTRCPVGSVGPCRMVARLGGFTCGVGASVTLTAGSEADPYAPSEVDWIVDAPIPLPLELPITGTSAAP
Sequences:
>Translated_948_residues MKPTRRPMLALLLAAAACSGGGGDDTPVALPVTVSATPALVKADGAATVTVHVRAGKGPVAVVASRGTFLGTGTSTATLA AAEGDLTLVTCDQRLDPACWGPVSVTASDASLAYGLAQVTFVGAEVCDNGVPDAGNPAADCAAAECAGATCRTGTGAVGT CAGGACTCTPDAGQAGGETACDDARDNDCDGGVDCADTGCAGRRCLAAGGAVGACAQGACVCTPASASEVACGDGRDDDC DGRVDCEDADCGGATCATADGRAGACAGGACAPVACDATETAEVSCANRLDDDCDGLVDCAEAACDGQACDAAAGARWAC RNRRCTDLASGVALGLAPARTRIPADGRATTAVTVTLARDGVPAAGEQVVLSTTLGAFRAEAGPAATVTVITDGAGVAAA TFVSAAQGGTALLTARLAAAPVETTASVRMPALAQISAQPAPAYPVMGVRDSGWNEANAVTFTLTGDDGLAYPDGLEVYL EHPRLGGSDLHGAMPCAVPGPACSAVHTAIMSGGAPPDTLGQARVTLQSGTVAGTLTVTATATAGGQTRSALLQPGVAVV GARASAGAFTLVCSPHNVEALAATDCGASLVDAAFTCVAVLQDRYQNVLGRETAVTFLSEASRAAVARTTPAYQPGMDPS AQRDLGLASGLFATLGGYLPEDVAPRPDEPSVTYADACGTRTHNPRDGLVAVIAVADGEEAFTDLDGDGRHGAGEPFVDL PEPFVDADDDGQHDPGEAFVDVDGSGDWTAANGRWDALTKIWTQTVVLFTGAPLPAVPAPGGAGLLGTRWAALPAAGEGA CTPTAPAAPFTLTAGDPPSRATYAVYAADVNLNLLPAATSYAVAVRAPSKISAAYRGLDAYPDGRGLEFTYQPCNAASAC GTRCPVGSVGPCRMVARLGGFTCGVGASVTLTAGSEADPYAPSEVDWIVDAPIPLPLELPITGTSAAP >Mature_948_residues MKPTRRPMLALLLAAAACSGGGGDDTPVALPVTVSATPALVKADGAATVTVHVRAGKGPVAVVASRGTFLGTGTSTATLA AAEGDLTLVTCDQRLDPACWGPVSVTASDASLAYGLAQVTFVGAEVCDNGVPDAGNPAADCAAAECAGATCRTGTGAVGT CAGGACTCTPDAGQAGGETACDDARDNDCDGGVDCADTGCAGRRCLAAGGAVGACAQGACVCTPASASEVACGDGRDDDC DGRVDCEDADCGGATCATADGRAGACAGGACAPVACDATETAEVSCANRLDDDCDGLVDCAEAACDGQACDAAAGARWAC RNRRCTDLASGVALGLAPARTRIPADGRATTAVTVTLARDGVPAAGEQVVLSTTLGAFRAEAGPAATVTVITDGAGVAAA TFVSAAQGGTALLTARLAAAPVETTASVRMPALAQISAQPAPAYPVMGVRDSGWNEANAVTFTLTGDDGLAYPDGLEVYL EHPRLGGSDLHGAMPCAVPGPACSAVHTAIMSGGAPPDTLGQARVTLQSGTVAGTLTVTATATAGGQTRSALLQPGVAVV GARASAGAFTLVCSPHNVEALAATDCGASLVDAAFTCVAVLQDRYQNVLGRETAVTFLSEASRAAVARTTPAYQPGMDPS AQRDLGLASGLFATLGGYLPEDVAPRPDEPSVTYADACGTRTHNPRDGLVAVIAVADGEEAFTDLDGDGRHGAGEPFVDL PEPFVDADDDGQHDPGEAFVDVDGSGDWTAANGRWDALTKIWTQTVVLFTGAPLPAVPAPGGAGLLGTRWAALPAAGEGA CTPTAPAAPFTLTAGDPPSRATYAVYAADVNLNLLPAATSYAVAVRAPSKISAAYRGLDAYPDGRGLEFTYQPCNAASAC GTRCPVGSVGPCRMVARLGGFTCGVGASVTLTAGSEADPYAPSEVDWIVDAPIPLPLELPITGTSAAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 93476; Mature: 93476
Theoretical pI: Translated: 4.09; Mature: 4.09
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51127 BIG1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.7 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 4.7 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPTRRPMLALLLAAAACSGGGGDDTPVALPVTVSATPALVKADGAATVTVHVRAGKGPV CCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCEEEECCCCEEEEEEEECCCCCE AVVASRGTFLGTGTSTATLAAAEGDLTLVTCDQRLDPACWGPVSVTASDASLAYGLAQVT EEEEECCEEEECCCCCEEEEECCCCEEEEEECCCCCCCCCCCEEEEECCCHHHHHHHHHE FVGAEVCDNGVPDAGNPAADCAAAECAGATCRTGTGAVGTCAGGACTCTPDAGQAGGETA EECHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEECCCCEEEECCCCCCCCCCCC CDDARDNDCDGGVDCADTGCAGRRCLAAGGAVGACAQGACVCTPASASEVACGDGRDDDC CCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHCCCCEEECCCCCCCEECCCCCCCCC DGRVDCEDADCGGATCATADGRAGACAGGACAPVACDATETAEVSCANRLDDDCDGLVDC CCEECCCCCCCCCCEEECCCCCCCCCCCCCCCCEECCCCCCCHHHHHHCCCCHHHHHHHH AEAACDGQACDAAAGARWACRNRRCTDLASGVALGLAPARTRIPADGRATTAVTVTLARD HHHHCCCCCCCCCCCCHHHHCCCCHHHHHCCCEEECCCHHCCCCCCCCCEEEEEEEEECC GVPAAGEQVVLSTTLGAFRAEAGPAATVTVITDGAGVAAATFVSAAQGGTALLTARLAAA CCCCCCCEEEEEEHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHCCCCCEEEEEHHHHC PVETTASVRMPALAQISAQPAPAYPVMGVRDSGWNEANAVTFTLTGDDGLAYPDGLEVYL CCCCCCCCCCCHHHHHCCCCCCCCCEEECCCCCCCCCCEEEEEEECCCCCCCCCCCEEEE EHPRLGGSDLHGAMPCAVPGPACSAVHTAIMSGGAPPDTLGQARVTLQSGTVAGTLTVTA ECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEECCCEEEEEEEEE TATAGGQTRSALLQPGVAVVGARASAGAFTLVCSPHNVEALAATDCGASLVDAAFTCVAV EECCCCCHHHHHHCCCEEEEECCCCCCEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHH LQDRYQNVLGRETAVTFLSEASRAAVARTTPAYQPGMDPSAQRDLGLASGLFATLGGYLP HHHHHHHHHCHHHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHCCCHHHHHHHHHCCCCC EDVAPRPDEPSVTYADACGTRTHNPRDGLVAVIAVADGEEAFTDLDGDGRHGAGEPFVDL CCCCCCCCCCCEEEHHCCCCCCCCCCCCEEEEEEEECCCHHHHCCCCCCCCCCCCCCCCC PEPFVDADDDGQHDPGEAFVDVDGSGDWTAANGRWDALTKIWTQTVVLFTGAPLPAVPAP CCCCCCCCCCCCCCCCCEEEEECCCCCEEECCCCHHHHHHHHHCEEEEEECCCCCCCCCC GGAGLLGTRWAALPAAGEGACTPTAPAAPFTLTAGDPPSRATYAVYAADVNLNLLPAATS CCCCCCCCCCEECCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEEEECCEEEEECCCE YAVAVRAPSKISAAYRGLDAYPDGRGLEFTYQPCNAASACGTRCPVGSVGPCRMVARLGG EEEEEECCHHHHHHHCCCCCCCCCCCCEEEECCCCCHHHCCCCCCCCCCCHHHHHHHHCC FTCGVGASVTLTAGSEADPYAPSEVDWIVDAPIPLPLELPITGTSAAP EEECCCCEEEEECCCCCCCCCCCCCCEEEECCCCCCEEECCCCCCCCC >Mature Secondary Structure MKPTRRPMLALLLAAAACSGGGGDDTPVALPVTVSATPALVKADGAATVTVHVRAGKGPV CCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCEEEECCCCEEEEEEEECCCCCE AVVASRGTFLGTGTSTATLAAAEGDLTLVTCDQRLDPACWGPVSVTASDASLAYGLAQVT EEEEECCEEEECCCCCEEEEECCCCEEEEEECCCCCCCCCCCEEEEECCCHHHHHHHHHE FVGAEVCDNGVPDAGNPAADCAAAECAGATCRTGTGAVGTCAGGACTCTPDAGQAGGETA EECHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEECCCCEEEECCCCCCCCCCCC CDDARDNDCDGGVDCADTGCAGRRCLAAGGAVGACAQGACVCTPASASEVACGDGRDDDC CCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHCCCCEEECCCCCCCEECCCCCCCCC DGRVDCEDADCGGATCATADGRAGACAGGACAPVACDATETAEVSCANRLDDDCDGLVDC CCEECCCCCCCCCCEEECCCCCCCCCCCCCCCCEECCCCCCCHHHHHHCCCCHHHHHHHH AEAACDGQACDAAAGARWACRNRRCTDLASGVALGLAPARTRIPADGRATTAVTVTLARD HHHHCCCCCCCCCCCCHHHHCCCCHHHHHCCCEEECCCHHCCCCCCCCCEEEEEEEEECC GVPAAGEQVVLSTTLGAFRAEAGPAATVTVITDGAGVAAATFVSAAQGGTALLTARLAAA CCCCCCCEEEEEEHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHCCCCCEEEEEHHHHC PVETTASVRMPALAQISAQPAPAYPVMGVRDSGWNEANAVTFTLTGDDGLAYPDGLEVYL CCCCCCCCCCCHHHHHCCCCCCCCCEEECCCCCCCCCCEEEEEEECCCCCCCCCCCEEEE EHPRLGGSDLHGAMPCAVPGPACSAVHTAIMSGGAPPDTLGQARVTLQSGTVAGTLTVTA ECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEECCCEEEEEEEEE TATAGGQTRSALLQPGVAVVGARASAGAFTLVCSPHNVEALAATDCGASLVDAAFTCVAV EECCCCCHHHHHHCCCEEEEECCCCCCEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHH LQDRYQNVLGRETAVTFLSEASRAAVARTTPAYQPGMDPSAQRDLGLASGLFATLGGYLP HHHHHHHHHCHHHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHCCCHHHHHHHHHCCCCC EDVAPRPDEPSVTYADACGTRTHNPRDGLVAVIAVADGEEAFTDLDGDGRHGAGEPFVDL CCCCCCCCCCCEEEHHCCCCCCCCCCCCEEEEEEEECCCHHHHCCCCCCCCCCCCCCCCC PEPFVDADDDGQHDPGEAFVDVDGSGDWTAANGRWDALTKIWTQTVVLFTGAPLPAVPAP CCCCCCCCCCCCCCCCCEEEEECCCCCEEECCCCHHHHHHHHHCEEEEEECCCCCCCCCC GGAGLLGTRWAALPAAGEGACTPTAPAAPFTLTAGDPPSRATYAVYAADVNLNLLPAATS CCCCCCCCCCEECCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEEEECCEEEEECCCE YAVAVRAPSKISAAYRGLDAYPDGRGLEFTYQPCNAASACGTRCPVGSVGPCRMVARLGG EEEEEECCHHHHHHHCCCCCCCCCCCCEEEECCCCCHHHCCCCCCCCCCCHHHHHHHHCC FTCGVGASVTLTAGSEADPYAPSEVDWIVDAPIPLPLELPITGTSAAP EEECCCCEEEEECCCCCCCCCCCCCCEEEECCCCCCEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA