| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is htpX [H]
Identifier: 220918540
GI number: 220918540
Start: 3837610
End: 3839631
Strand: Direct
Name: htpX [H]
Synonym: A2cp1_3448
Alternate gene names: 220918540
Gene position: 3837610-3839631 (Clockwise)
Preceding gene: 220918539
Following gene: 220918542
Centisome position: 76.3
GC content: 80.86
Gene sequence:
>2022_bases ATGGCCGCCCAGGCCCCGCCCGCCGGGCGGGTCACGCTGGACTTCTTCGCCGCCCAGCGGAACGCCCGCCGGCGCACCAC CGTCCTCGTGATCGCGTTCGCGGTGGCGCTCGCCGCCGTCATCGCGGTGGTCTACCTCGCGCTCGCCGTGGCGCTCGGGC TGGGCGCCGGCGCGGGCGGCGGCGGGTGGGCGGTGGACGGGTCCGGCGCGGTGTACGGCCCGCCGCTCCTCCAGCCCGGC CTGCTCGCGCTCACCGCGCTCGGCGTCGGCGCGGTCACCGGGGTGGGCGGCGCGTGGCACGCGGCGCGGCTCTCGGCGGG CGGCGGCGCCGCGGTGGCGGAGCTGCTGGGCGGCACGCCGGTCGACCGCGCCACCCGGGATCCCGCCGAGCGGCGCCTCG TCAACGTGACGGAGGAGATGGCCCTCGCCGCCGGGATGCCGGTGCCGCGGCTCTACGTGCTCCGCGGCGAGGCCGGCATC AACGCGTTCGCGGCCGGCCACACGCCCGGTCACAGCGTGGTGGCGGTGACGCGGGGCGCGCTGGAGCGGCTCACCCGCGA CGAGCTGCAGGGCGTGGTGGCCCACGAGCTGTCGCACGTGCTGAACGCGGACACGCGCATCGACCTGCGGCTCATGGCGG CGGTGGGCGGGCTCGGGTTCCTGACGCTGCTCGGGCGGCTGCTCCTCGACGTCGACTCCGGGCCGCGCCGCTCGCGCGAT CGCAACCGCGGCGCCATCGCGCTGGTCGGGCTGGGGCTGCTCGTCGCCGGCGCCATGGGCAGCCTGTGCGGCCGGCTGGT CCGCTTCGCGGTGGCGCGGCAGCGCGAGTGGCTGGCGGACGCGTCGGCGGTGCAGTTCACGCGCAACCCGGACGGCCTGG CGGGCGCGCTCCGGAAGATCGCGGCGGAGGGGTCGGCGGTGTCCGGGCCGCACGTCGCCGAGGCGGCGCACCTGTTCTTC GCGCGGGCCTCGGGCGGCCTCCTCGCCGGCCTGTTCTCCACGCACCCGCCCATCGAGGAGCGCCTCCGCCGGATCGCGCC GCACCTCGCCGGCGCCCCCCTCTCCCGCGCCACGGCGGCCTCCGCGGAGGCGTCGCCGCCCCGCCCTGCGCCGGCCCCGG CCGCTGCGCAGGCGCCGGACCGCGCCGGCGAGGCGGGGCTCGCGGGCGGACCGGCGGAGCCGGCGTCGGCGCCGCCCGCG TCCGCGCTCCTGGCGGACCACCTCCCCCGCGCGGCCGGGCTGCTCTCGGGCCTCCCGCCCGCGCTCGCGGCGGCGGCGCG CGAGCCGTTCGGCGCGCGCGGCCTCGCCTGCGCGCTGCTCGTGGACGCGGCGGCGCCGGTGCGCGCGGCGCAGCTCGCGT ACCTCGAGCGGAACGACCGGGCGCTCCGTGCCGAGGTGGAGCGGCTCCTCCCCGCGCTCTCGGGGCTGGATCGCACCGCC CGCAACGCGCTCCTCGCGCTGGCGCTCCCGGCGCTCGACGCGCTCTCGCCGGCGCAGGGCACCGCGCTCGCCGCCGACCT CCGCGCGCTCGCCGCCGCGGACCGCGCCGTGTCGCCCTACGAGCTGGCCGTGCTCCGCGCCGTCCTCCGGCGGCTCTCCC GCGGCGCCGGCGCGCCGCCCCGGGCGCTCCTGCGCACCGTCGAGGAGGCGGGGCCGGAGTGCCTGGAGCTGCTCTCCTGC CTGGCGTGGACCGGCGGGCGCGACGCGGCCGCGGCGCAGGCCGCGCTCGACGCCGGCGCGCGGGCGCTGGGTGCGCGCGG GCCGTGGCGGGTCCTCCCGCGCGACCGGCTCGGGCTCGGGCGCCTCGAGACCGCGCTCGACCGGCTCGACGCGGCGTCAC CCTCAGTGAAGTCCGCGACGCTGGAGGCGTGCTCGGCCGTGGTCCGGGCCGACGGGCGCGTCGGCGCGGACGAGGCCGAG CTGGTCCGGGCGGTCGCTGCCTCGCTCGGCCTACCCTTTCCGCCCGGGCTGGAGGCGGCCACCGCGCCCGGGGCGGACGC CCTGGCGCCCCCGCTCAGTTGA
Upstream 100 bases:
>100_bases GTTCCCCGGCGTGCTGCTCGCCGGCGGCTTCCCGCCCGCCACGTCGTTCGAGCTGCAGGGCGCCGCCGAGCGCGAGCCGG TGCGGGTGCAGTTCTAGCCG
Downstream 100 bases:
>100_bases AGAACGCGGGCGGCCGGACCGTCACGCCCTCGATCGGCTGCCGGGCGGCGAACCCCGCGTCCACGGGGTGCCAGTGCGAC ACCGCCGGCTCCCCGAACTG
Product: peptidase M48 Ste24p
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 673; Mature: 672
Protein sequence:
>673_residues MAAQAPPAGRVTLDFFAAQRNARRRTTVLVIAFAVALAAVIAVVYLALAVALGLGAGAGGGGWAVDGSGAVYGPPLLQPG LLALTALGVGAVTGVGGAWHAARLSAGGGAAVAELLGGTPVDRATRDPAERRLVNVTEEMALAAGMPVPRLYVLRGEAGI NAFAAGHTPGHSVVAVTRGALERLTRDELQGVVAHELSHVLNADTRIDLRLMAAVGGLGFLTLLGRLLLDVDSGPRRSRD RNRGAIALVGLGLLVAGAMGSLCGRLVRFAVARQREWLADASAVQFTRNPDGLAGALRKIAAEGSAVSGPHVAEAAHLFF ARASGGLLAGLFSTHPPIEERLRRIAPHLAGAPLSRATAASAEASPPRPAPAPAAAQAPDRAGEAGLAGGPAEPASAPPA SALLADHLPRAAGLLSGLPPALAAAAREPFGARGLACALLVDAAAPVRAAQLAYLERNDRALRAEVERLLPALSGLDRTA RNALLALALPALDALSPAQGTALAADLRALAAADRAVSPYELAVLRAVLRRLSRGAGAPPRALLRTVEEAGPECLELLSC LAWTGGRDAAAAQAALDAGARALGARGPWRVLPRDRLGLGRLETALDRLDAASPSVKSATLEACSAVVRADGRVGADEAE LVRAVAASLGLPFPPGLEAATAPGADALAPPLS
Sequences:
>Translated_673_residues MAAQAPPAGRVTLDFFAAQRNARRRTTVLVIAFAVALAAVIAVVYLALAVALGLGAGAGGGGWAVDGSGAVYGPPLLQPG LLALTALGVGAVTGVGGAWHAARLSAGGGAAVAELLGGTPVDRATRDPAERRLVNVTEEMALAAGMPVPRLYVLRGEAGI NAFAAGHTPGHSVVAVTRGALERLTRDELQGVVAHELSHVLNADTRIDLRLMAAVGGLGFLTLLGRLLLDVDSGPRRSRD RNRGAIALVGLGLLVAGAMGSLCGRLVRFAVARQREWLADASAVQFTRNPDGLAGALRKIAAEGSAVSGPHVAEAAHLFF ARASGGLLAGLFSTHPPIEERLRRIAPHLAGAPLSRATAASAEASPPRPAPAPAAAQAPDRAGEAGLAGGPAEPASAPPA SALLADHLPRAAGLLSGLPPALAAAAREPFGARGLACALLVDAAAPVRAAQLAYLERNDRALRAEVERLLPALSGLDRTA RNALLALALPALDALSPAQGTALAADLRALAAADRAVSPYELAVLRAVLRRLSRGAGAPPRALLRTVEEAGPECLELLSC LAWTGGRDAAAAQAALDAGARALGARGPWRVLPRDRLGLGRLETALDRLDAASPSVKSATLEACSAVVRADGRVGADEAE LVRAVAASLGLPFPPGLEAATAPGADALAPPLS >Mature_672_residues AAQAPPAGRVTLDFFAAQRNARRRTTVLVIAFAVALAAVIAVVYLALAVALGLGAGAGGGGWAVDGSGAVYGPPLLQPGL LALTALGVGAVTGVGGAWHAARLSAGGGAAVAELLGGTPVDRATRDPAERRLVNVTEEMALAAGMPVPRLYVLRGEAGIN AFAAGHTPGHSVVAVTRGALERLTRDELQGVVAHELSHVLNADTRIDLRLMAAVGGLGFLTLLGRLLLDVDSGPRRSRDR NRGAIALVGLGLLVAGAMGSLCGRLVRFAVARQREWLADASAVQFTRNPDGLAGALRKIAAEGSAVSGPHVAEAAHLFFA RASGGLLAGLFSTHPPIEERLRRIAPHLAGAPLSRATAASAEASPPRPAPAPAAAQAPDRAGEAGLAGGPAEPASAPPAS ALLADHLPRAAGLLSGLPPALAAAAREPFGARGLACALLVDAAAPVRAAQLAYLERNDRALRAEVERLLPALSGLDRTAR NALLALALPALDALSPAQGTALAADLRALAAADRAVSPYELAVLRAVLRRLSRGAGAPPRALLRTVEEAGPECLELLSCL AWTGGRDAAAAQAALDAGARALGARGPWRVLPRDRLGLGRLETALDRLDAASPSVKSATLEACSAVVRADGRVGADEAEL VRAVAASLGLPFPPGLEAATAPGADALAPPLS
Specific function: Unknown Function. Overexpression Of A Truncated Form Of The Htpx Protein Leads To An Increase In The Degradation Of Abnormal Proteins. [C]
COG id: COG0501
COG function: function code O; Zn-dependent protease with chaperone function
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M48B family [H]
Homologues:
Organism=Escherichia coli, GI1788133, Length=296, Percent_Identity=27.027027027027, Blast_Score=74, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022919 - InterPro: IPR001915 [H]
Pfam domain/function: PF01435 Peptidase_M48 [H]
EC number: 3.4.24.- [C]
Molecular weight: Translated: 67816; Mature: 67685
Theoretical pI: Translated: 10.12; Mature: 10.12
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAQAPPAGRVTLDFFAAQRNARRRTTVLVIAFAVALAAVIAVVYLALAVALGLGAGAGG CCCCCCCCCCEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC GGWAVDGSGAVYGPPLLQPGLLALTALGVGAVTGVGGAWHAARLSAGGGAAVAELLGGTP CCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHCCCC VDRATRDPAERRLVNVTEEMALAAGMPVPRLYVLRGEAGINAFAAGHTPGHSVVAVTRGA CCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEECCCCCCCCEEEHHHHH LERLTRDELQGVVAHELSHVLNADTRIDLRLMAAVGGLGFLTLLGRLLLDVDSGPRRSRD HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC RNRGAIALVGLGLLVAGAMGSLCGRLVRFAVARQREWLADASAVQFTRNPDGLAGALRKI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEECCCCCHHHHHHHHH AAEGSAVSGPHVAEAAHLFFARASGGLLAGLFSTHPPIEERLRRIAPHLAGAPLSRATAA HHCCCCCCCCHHHHHHHHHHHHCCCCCEEHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHC SAEASPPRPAPAPAAAQAPDRAGEAGLAGGPAEPASAPPASALLADHLPRAAGLLSGLPP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCHHHHHHHHCCCH ALAAAAREPFGARGLACALLVDAAAPVRAAQLAYLERNDRALRAEVERLLPALSGLDRTA HHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHH RNALLALALPALDALSPAQGTALAADLRALAAADRAVSPYELAVLRAVLRRLSRGAGAPP HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCH RALLRTVEEAGPECLELLSCLAWTGGRDAAAAQAALDAGARALGARGPWRVLPRDRLGLG HHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH RLETALDRLDAASPSVKSATLEACSAVVRADGRVGADEAELVRAVAASLGLPFPPGLEAA HHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCC TAPGADALAPPLS CCCCCCCCCCCCC >Mature Secondary Structure AAQAPPAGRVTLDFFAAQRNARRRTTVLVIAFAVALAAVIAVVYLALAVALGLGAGAGG CCCCCCCCCEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC GGWAVDGSGAVYGPPLLQPGLLALTALGVGAVTGVGGAWHAARLSAGGGAAVAELLGGTP CCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHHCCCC VDRATRDPAERRLVNVTEEMALAAGMPVPRLYVLRGEAGINAFAAGHTPGHSVVAVTRGA CCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEECCCCCCCCEEEHHHHH LERLTRDELQGVVAHELSHVLNADTRIDLRLMAAVGGLGFLTLLGRLLLDVDSGPRRSRD HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC RNRGAIALVGLGLLVAGAMGSLCGRLVRFAVARQREWLADASAVQFTRNPDGLAGALRKI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEECCCCCHHHHHHHHH AAEGSAVSGPHVAEAAHLFFARASGGLLAGLFSTHPPIEERLRRIAPHLAGAPLSRATAA HHCCCCCCCCHHHHHHHHHHHHCCCCCEEHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHC SAEASPPRPAPAPAAAQAPDRAGEAGLAGGPAEPASAPPASALLADHLPRAAGLLSGLPP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCHHHHHHHHCCCH ALAAAAREPFGARGLACALLVDAAAPVRAAQLAYLERNDRALRAEVERLLPALSGLDRTA HHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHH RNALLALALPALDALSPAQGTALAADLRALAAADRAVSPYELAVLRAVLRRLSRGAGAPP HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCH RALLRTVEEAGPECLELLSCLAWTGGRDAAAAQAALDAGARALGARGPWRVLPRDRLGLG HHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH RLETALDRLDAASPSVKSATLEACSAVVRADGRVGADEAELVRAVAASLGLPFPPGLEAA HHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCC TAPGADALAPPLS CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: Zn [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA