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The map label for this gene is ybeQ [H]

Identifier: 220918535

GI number: 220918535

Start: 3832496

End: 3833242

Strand: Direct

Name: ybeQ [H]

Synonym: A2cp1_3443

Alternate gene names: 220918535

Gene position: 3832496-3833242 (Clockwise)

Preceding gene: 220918534

Following gene: 220918538

Centisome position: 76.2

GC content: 82.86

Gene sequence:

>747_bases
ATGGACCCGCGCGCCGAGCTGCTGGCACGCCGCGCCGCGCTGCGCACCCGCCTGCGCGCCGGCGACGCCCGCGCCGCGCT
CTCGCTGGCCCGCTCGCTGGAGCGCGACCCGCCGCGCGACCACGCCGCCGCCCGGCGCGCCTACGAGGCCGCGGCGAAGG
CCGGGCTCGCGGACGCGATGGCCGCGCTCGGCGAGATGCTCCGCGACGGCCGCGGCGGCCCGCGGGATCTCGAGGGCGCG
GTGCGCTGGTTCTCCGAGGCGGCGCGGCGCGGGAAGCCCGAGGCGATCGCCAGCCTGGCCGGCGCGCTGCTGCACGGCGA
GGGCGCGCCGCGGGATCGCGCGACCGCGATCCGCCTGTTCCGCCGCGCGGCCTCGGCCGGCGTGGTCCAGGCCATGGTGG
ACCTCGCGCTGTGCCTGCGCCAGGGCGCCGCCGGCGTGCCGCGCGACGACGCGGCCGCGCTGCGCTGGCTCCGCCGCGCC
GCCACGCTGGGCCACGCCGGCGCGGCGCTCCTCGTCGGCCAGGCCTACTGGTTCGGCCGCATGGGGGCGCCCCGGGATCG
CGCGCGGGCAGCGCCGTTCCTGCTCGCGGCCGCGCGCAAGGGCGAGCCGAAGGCCGCCGGTCTGGCCGCGGAGGCCCGGA
CGGTGCTCGGGGGCGCGGCGCCGCGGCGGCCGCCGGCGCGCGTCACCGCCCCCGCCGCGCGTCCCGCAGGATCTCGCGCG
CCGCGTTCCGGCCGCACGCGCCCATGA

Upstream 100 bases:

>100_bases
GTGCTGGGCGCGCTCCGGCGCCGCGTCGCGCGCTGACCGACCGCCCGCCGGCGCCGGCGCCGGATTCGCGGGCCACCCGG
CCCCGTGGCACCATGGCGCG

Downstream 100 bases:

>100_bases
CCCCGCCGCCCGGGTGGGTGGCGGCGCCGCACAGGTACAGGCCCGGCACCGGCGTGCGGTAGCCGCCGCCGCCGGGGAAC
GGCCGCAGGAAGAGCAGCTG

Product: Sel1 domain-containing protein repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MDPRAELLARRAALRTRLRAGDARAALSLARSLERDPPRDHAAARRAYEAAAKAGLADAMAALGEMLRDGRGGPRDLEGA
VRWFSEAARRGKPEAIASLAGALLHGEGAPRDRATAIRLFRRAASAGVVQAMVDLALCLRQGAAGVPRDDAAALRWLRRA
ATLGHAGAALLVGQAYWFGRMGAPRDRARAAPFLLAAARKGEPKAAGLAAEARTVLGGAAPRRPPARVTAPAARPAGSRA
PRSGRTRP

Sequences:

>Translated_248_residues
MDPRAELLARRAALRTRLRAGDARAALSLARSLERDPPRDHAAARRAYEAAAKAGLADAMAALGEMLRDGRGGPRDLEGA
VRWFSEAARRGKPEAIASLAGALLHGEGAPRDRATAIRLFRRAASAGVVQAMVDLALCLRQGAAGVPRDDAAALRWLRRA
ATLGHAGAALLVGQAYWFGRMGAPRDRARAAPFLLAAARKGEPKAAGLAAEARTVLGGAAPRRPPARVTAPAARPAGSRA
PRSGRTRP
>Mature_248_residues
MDPRAELLARRAALRTRLRAGDARAALSLARSLERDPPRDHAAARRAYEAAAKAGLADAMAALGEMLRDGRGGPRDLEGA
VRWFSEAARRGKPEAIASLAGALLHGEGAPRDRATAIRLFRRAASAGVVQAMVDLALCLRQGAAGVPRDDAAALRWLRRA
ATLGHAGAALLVGQAYWFGRMGAPRDRARAAPFLLAAARKGEPKAAGLAAEARTVLGGAAPRRPPARVTAPAARPAGSRA
PRSGRTRP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybeT [H]

Homologues:

Organism=Homo sapiens, GI151301150, Length=162, Percent_Identity=31.4814814814815, Blast_Score=67, Evalue=1e-11,
Organism=Escherichia coli, GI87081769, Length=204, Percent_Identity=27.9411764705882, Blast_Score=76, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006597
- InterPro:   IPR011990 [H]

Pfam domain/function: PF08238 Sel1 [H]

EC number: NA

Molecular weight: Translated: 25922; Mature: 25922

Theoretical pI: Translated: 12.30; Mature: 12.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDPRAELLARRAALRTRLRAGDARAALSLARSLERDPPRDHAAARRAYEAAAKAGLADAM
CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
AALGEMLRDGRGGPRDLEGAVRWFSEAARRGKPEAIASLAGALLHGEGAPRDRATAIRLF
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHH
RRAASAGVVQAMVDLALCLRQGAAGVPRDDAAALRWLRRAATLGHAGAALLVGQAYWFGR
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC
MGAPRDRARAAPFLLAAARKGEPKAAGLAAEARTVLGGAAPRRPPARVTAPAARPAGSRA
CCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
PRSGRTRP
CCCCCCCC
>Mature Secondary Structure
MDPRAELLARRAALRTRLRAGDARAALSLARSLERDPPRDHAAARRAYEAAAKAGLADAM
CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
AALGEMLRDGRGGPRDLEGAVRWFSEAARRGKPEAIASLAGALLHGEGAPRDRATAIRLF
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHH
RRAASAGVVQAMVDLALCLRQGAAGVPRDDAAALRWLRRAATLGHAGAALLVGQAYWFGR
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC
MGAPRDRARAAPFLLAAARKGEPKAAGLAAEARTVLGGAAPRRPPARVTAPAARPAGSRA
CCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
PRSGRTRP
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]