| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is 220918484
Identifier: 220918484
GI number: 220918484
Start: 3779384
End: 3779866
Strand: Reverse
Name: 220918484
Synonym: A2cp1_3390
Alternate gene names: NA
Gene position: 3779866-3779384 (Counterclockwise)
Preceding gene: 220918485
Following gene: 220918480
Centisome position: 75.16
GC content: 70.39
Gene sequence:
>483_bases ATGAGCGTCGGGAGCTGGCTGCTCTGGGGCTTCGTCGGGACGGTCGTGCTCACGACGGTGATGTCGGCGAGCCAGGGCCT CCGGCTCACCCGCATGAACCTGCCGTACATGCTGGGCACGATGCTCACCCCGAGCCGGGACCGGGCGAAGCTCCTCGGGT TCGGCGTGCACCTCGTGAACGGCTGGTTGTTCTCGCTCCTATACGTCGCGGCGTTCGAGGCCTGGGGCAGGGCATCGGTG TGGCTGGGCGCCGCCATCGGCCTCGTCCACGCGGCGTTCGTGCTGACCGCGGGGATGCGGATCCTGCCCGGTCTCCACCC GAGGATGGCGAGCGAGGAGCAAGGCCCCGACGTCACGCGGCAGCTCGAGCCGCCCGGGTTCCTCGCGCTGAACTACGGCG TCCGGACGCCCATCACCACGGTCGCCGCGCACCTCGTGTTCGGCGGGATCCTGGGCGCGTTCTATCGCGTGATGCCCGGG TGA
Upstream 100 bases:
>100_bases TCATCAACGCGGCGCTCTCGCTGGAGCGGCGGATCCGGCGCGAGGCGCCAGCGTCGGCTGCGGAGGCGCGCGAGCTGCCC GCGGCCGACGAGGTGGGCCC
Downstream 100 bases:
>100_bases GGTGGAGGGACGGCGACGGCGACGTGACCCCGCCGATGCCGGGGCTGCCGCGCTCGCCCGTCCCCACCGCACCGGACCCC GCGTCAATCCGCGACGCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 160; Mature: 159
Protein sequence:
>160_residues MSVGSWLLWGFVGTVVLTTVMSASQGLRLTRMNLPYMLGTMLTPSRDRAKLLGFGVHLVNGWLFSLLYVAAFEAWGRASV WLGAAIGLVHAAFVLTAGMRILPGLHPRMASEEQGPDVTRQLEPPGFLALNYGVRTPITTVAAHLVFGGILGAFYRVMPG
Sequences:
>Translated_160_residues MSVGSWLLWGFVGTVVLTTVMSASQGLRLTRMNLPYMLGTMLTPSRDRAKLLGFGVHLVNGWLFSLLYVAAFEAWGRASV WLGAAIGLVHAAFVLTAGMRILPGLHPRMASEEQGPDVTRQLEPPGFLALNYGVRTPITTVAAHLVFGGILGAFYRVMPG >Mature_159_residues SVGSWLLWGFVGTVVLTTVMSASQGLRLTRMNLPYMLGTMLTPSRDRAKLLGFGVHLVNGWLFSLLYVAAFEAWGRASVW LGAAIGLVHAAFVLTAGMRILPGLHPRMASEEQGPDVTRQLEPPGFLALNYGVRTPITTVAAHLVFGGILGAFYRVMPG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17257; Mature: 17126
Theoretical pI: Translated: 10.79; Mature: 10.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVGSWLLWGFVGTVVLTTVMSASQGLRLTRMNLPYMLGTMLTPSRDRAKLLGFGVHLVN CCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHCCCCCHHHHHHHHHHHHHH GWLFSLLYVAAFEAWGRASVWLGAAIGLVHAAFVLTAGMRILPGLHPRMASEEQGPDVTR HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHH QLEPPGFLALNYGVRTPITTVAAHLVFGGILGAFYRVMPG CCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SVGSWLLWGFVGTVVLTTVMSASQGLRLTRMNLPYMLGTMLTPSRDRAKLLGFGVHLVN CCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHCCCCCHHHHHHHHHHHHHH GWLFSLLYVAAFEAWGRASVWLGAAIGLVHAAFVLTAGMRILPGLHPRMASEEQGPDVTR HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHH QLEPPGFLALNYGVRTPITTVAAHLVFGGILGAFYRVMPG CCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA