| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is 220918358
Identifier: 220918358
GI number: 220918358
Start: 3623692
End: 3625455
Strand: Reverse
Name: 220918358
Synonym: A2cp1_3262
Alternate gene names: NA
Gene position: 3625455-3623692 (Counterclockwise)
Preceding gene: 220918359
Following gene: 220918357
Centisome position: 72.09
GC content: 69.78
Gene sequence:
>1764_bases ATGACCATCCCGCACGACATGCCCCGCTCCCTGTTGCTCGCCGTCCTCGTCGCGTTTGCCGCGCCCCAGGTCGCCTCGGC GGCGGAGCCGGCGAAGCCTGACGCCGCGCCCAAGGCGGCCGATCCCTCGCCTGCCTCGAAGCCGGCAACCACCGCGCCCG AGCCCATGGCGGCGCGCATCGAGGCTCCCCTGTTCTCGCCGCTGTTCGCGCAGACGCCGGTGGCGCGCATCGACGATCAG GTCGTGCGCCTGGCGGAGCTCCAGGAGGCGCTGGCCGCGACGCACGATGAGCGGAAGGCGGGCGCCGCGACGTCGCCGGA CTTCAAGGCCGTGCTCCAGCGGCTCATCGACTCGCGGCTCCTGATCATGGAAGCGCGCGAGATGGGGCTGGACGAGCTGC CCGAGCTGAAGGAGCAGCTGGCGGTCTTCAAGGACGTGACGCTGCGCGAGACGCTCCAGCAGCAATTGACGAAGGACGTC AAGCCGGACGCGCTCGAGGTCGAGCGCGTCTACAAGGAGTCGGTGCGGCGCTGGAAGGTGCGCTCGCTCCTCTTCCGGCA GGAGGAGGACGCCGCCGCGGTGAAGCCGGCGCTTGCCGGCGGCAAGGGCTTCGCCGAGCTGGCGAAGCAGCTCATCGCGG AGAAGAAGGCCGAGGGCACCGGGGAGCCGGAGGTCCTGCCCCCGGATCAGACGCTGCCGGCCGTCGCGGCGGCGCTCAAG CCGCTGCAGAAGGGCGAGGCCACGACGCCGCTCAAGCTGCAGAACGGCTTCGCGGTCCTGTACGTGGAGGACATCGTCTA TCCGAGCGATCCGGCGAAGCGCGCCGAGGCGGAGAAGGCGTCCGTCGATCGGCAGAGCGGCCAGCTTCTCACGGCATTCC GCAAGGAGCTGGATCGCAAGTACGTGAAGATCGACGAGGCCCTGCTCCGGAAGATCGACTTCGACGCGCCGAAGCCGGGG TTCGCCGTGCTCGTGAAGGACAAGCGGCCCATCGTCCGGATTGCCGGCGAGGCGCCCATCACGGTGGGGGACCTCGCCAA CGCGGTCGGCGAGAAGTTCTTCCATGGCGTGGAGAAGCCGCAGCAGGAGAAGCGGGTGGACAAGCTCAAGCGGCCGCGCC TGGACGGGCTCATCTACAAGCGCGTGTTCACGAAGGAGGCGCGGGTCCGGAAGCTCGATCAGTCCGAGGAGTACCTGCGG GCTGTCGAGGACCAGGAGAACTCGATGGTGTTCGGCACGTTCGTGCAGCGCGTGCTGGTCCCGGACGTCTCCCTCAAGGA CGAGGATCTCCGGGCGTACTACGACGGCCACCGCGACGAGTTCACCTCGGCGCCGCTGTACCGCCTCGAGCAGGTCGCCT TCGCCGACATGAAGGGCGCCCAGCGGGCGGCCGAGCGGCTCGCCCGCGGCACCGACTTCAAGTGGCTCAAGGCGAACGCC GAGGGGCAGCTCCCGCCGGCGCAGCGCGCGCTCGACTTCGAGGGACAGCTCCTCTCCGCCAAGGGGCTCCCGGAGGATCT CGCGGGGGCGCTCGGGTCGGCGCAGGTCGGCGACTACCGCCTGCACCAAGGGCCGAGGGGACAGGGCTACGTGGTGCTGG TCGTGTCGCGCACCGAGCCGCAGGTCCAGCCCTACGCAGAAGCCAGGCCCGACATCCAGAAGAAGCTGTTCGGACAGGCG CTGAACCGCGCGGTGACCGACTGGGCCGCGAAGCTGCGTGCCGCGCACGAGATCGAGACGTTCATCACCCGCATCGGCAA CTGA
Upstream 100 bases:
>100_bases TGCGCCGAGGCGTTTCAATGGTTCGGAAAACACAACCGAATTTCCATGTCTTACATCGAGCTCACGAGGCACAACCGTTG CACCGAGGTCGGCCGCCCAC
Downstream 100 bases:
>100_bases GGCGGGGTCCTCCACCGAGGGAATGGCCGTGACGCGCACGACGAGACTCTGGCGGATCCTCGCGCTGGCGGCGTTCACCG CCGGCGTGCTCCTGGCGCCT
Product: PpiC-type peptidyl-prolyl cis-trans isomerase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 587; Mature: 586
Protein sequence:
>587_residues MTIPHDMPRSLLLAVLVAFAAPQVASAAEPAKPDAAPKAADPSPASKPATTAPEPMAARIEAPLFSPLFAQTPVARIDDQ VVRLAELQEALAATHDERKAGAATSPDFKAVLQRLIDSRLLIMEAREMGLDELPELKEQLAVFKDVTLRETLQQQLTKDV KPDALEVERVYKESVRRWKVRSLLFRQEEDAAAVKPALAGGKGFAELAKQLIAEKKAEGTGEPEVLPPDQTLPAVAAALK PLQKGEATTPLKLQNGFAVLYVEDIVYPSDPAKRAEAEKASVDRQSGQLLTAFRKELDRKYVKIDEALLRKIDFDAPKPG FAVLVKDKRPIVRIAGEAPITVGDLANAVGEKFFHGVEKPQQEKRVDKLKRPRLDGLIYKRVFTKEARVRKLDQSEEYLR AVEDQENSMVFGTFVQRVLVPDVSLKDEDLRAYYDGHRDEFTSAPLYRLEQVAFADMKGAQRAAERLARGTDFKWLKANA EGQLPPAQRALDFEGQLLSAKGLPEDLAGALGSAQVGDYRLHQGPRGQGYVVLVVSRTEPQVQPYAEARPDIQKKLFGQA LNRAVTDWAAKLRAAHEIETFITRIGN
Sequences:
>Translated_587_residues MTIPHDMPRSLLLAVLVAFAAPQVASAAEPAKPDAAPKAADPSPASKPATTAPEPMAARIEAPLFSPLFAQTPVARIDDQ VVRLAELQEALAATHDERKAGAATSPDFKAVLQRLIDSRLLIMEAREMGLDELPELKEQLAVFKDVTLRETLQQQLTKDV KPDALEVERVYKESVRRWKVRSLLFRQEEDAAAVKPALAGGKGFAELAKQLIAEKKAEGTGEPEVLPPDQTLPAVAAALK PLQKGEATTPLKLQNGFAVLYVEDIVYPSDPAKRAEAEKASVDRQSGQLLTAFRKELDRKYVKIDEALLRKIDFDAPKPG FAVLVKDKRPIVRIAGEAPITVGDLANAVGEKFFHGVEKPQQEKRVDKLKRPRLDGLIYKRVFTKEARVRKLDQSEEYLR AVEDQENSMVFGTFVQRVLVPDVSLKDEDLRAYYDGHRDEFTSAPLYRLEQVAFADMKGAQRAAERLARGTDFKWLKANA EGQLPPAQRALDFEGQLLSAKGLPEDLAGALGSAQVGDYRLHQGPRGQGYVVLVVSRTEPQVQPYAEARPDIQKKLFGQA LNRAVTDWAAKLRAAHEIETFITRIGN >Mature_586_residues TIPHDMPRSLLLAVLVAFAAPQVASAAEPAKPDAAPKAADPSPASKPATTAPEPMAARIEAPLFSPLFAQTPVARIDDQV VRLAELQEALAATHDERKAGAATSPDFKAVLQRLIDSRLLIMEAREMGLDELPELKEQLAVFKDVTLRETLQQQLTKDVK PDALEVERVYKESVRRWKVRSLLFRQEEDAAAVKPALAGGKGFAELAKQLIAEKKAEGTGEPEVLPPDQTLPAVAAALKP LQKGEATTPLKLQNGFAVLYVEDIVYPSDPAKRAEAEKASVDRQSGQLLTAFRKELDRKYVKIDEALLRKIDFDAPKPGF AVLVKDKRPIVRIAGEAPITVGDLANAVGEKFFHGVEKPQQEKRVDKLKRPRLDGLIYKRVFTKEARVRKLDQSEEYLRA VEDQENSMVFGTFVQRVLVPDVSLKDEDLRAYYDGHRDEFTSAPLYRLEQVAFADMKGAQRAAERLARGTDFKWLKANAE GQLPPAQRALDFEGQLLSAKGLPEDLAGALGSAQVGDYRLHQGPRGQGYVVLVVSRTEPQVQPYAEARPDIQKKLFGQAL NRAVTDWAAKLRAAHEIETFITRIGN
Specific function: Unknown
COG id: COG0760
COG function: function code O; Parvulin-like peptidyl-prolyl isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64797; Mature: 64666
Theoretical pI: Translated: 7.85; Mature: 7.85
Prosite motif: PS50198 PPIC_PPIASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIPHDMPRSLLLAVLVAFAAPQVASAAEPAKPDAAPKAADPSPASKPATTAPEPMAARI CCCCCCCHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH EAPLFSPLFAQTPVARIDDQVVRLAELQEALAATHDERKAGAATSPDFKAVLQRLIDSRL CCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHHHHH LIMEAREMGLDELPELKEQLAVFKDVTLRETLQQQLTKDVKPDALEVERVYKESVRRWKV HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH RSLLFRQEEDAAAVKPALAGGKGFAELAKQLIAEKKAEGTGEPEVLPPDQTLPAVAAALK HHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH PLQKGEATTPLKLQNGFAVLYVEDIVYPSDPAKRAEAEKASVDRQSGQLLTAFRKELDRK HHHCCCCCCCEEECCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH YVKIDEALLRKIDFDAPKPGFAVLVKDKRPIVRIAGEAPITVGDLANAVGEKFFHGVEKP HHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEECCCCCEEHHHHHHHHHHHHHHHCCCH QQEKRVDKLKRPRLDGLIYKRVFTKEARVRKLDQSEEYLRAVEDQENSMVFGTFVQRVLV HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEHHHHHHHHHC PDVSLKDEDLRAYYDGHRDEFTSAPLYRLEQVAFADMKGAQRAAERLARGTDFKWLKANA CCCCCCCHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCC EGQLPPAQRALDFEGQLLSAKGLPEDLAGALGSAQVGDYRLHQGPRGQGYVVLVVSRTEP CCCCCHHHHHCCCCCCEECCCCCCHHHHHHCCCCCCCCEEECCCCCCCCEEEEEEECCCC QVQPYAEARPDIQKKLFGQALNRAVTDWAAKLRAAHEIETFITRIGN CCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TIPHDMPRSLLLAVLVAFAAPQVASAAEPAKPDAAPKAADPSPASKPATTAPEPMAARI CCCCCCHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH EAPLFSPLFAQTPVARIDDQVVRLAELQEALAATHDERKAGAATSPDFKAVLQRLIDSRL CCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHHHHH LIMEAREMGLDELPELKEQLAVFKDVTLRETLQQQLTKDVKPDALEVERVYKESVRRWKV HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH RSLLFRQEEDAAAVKPALAGGKGFAELAKQLIAEKKAEGTGEPEVLPPDQTLPAVAAALK HHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH PLQKGEATTPLKLQNGFAVLYVEDIVYPSDPAKRAEAEKASVDRQSGQLLTAFRKELDRK HHHCCCCCCCEEECCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH YVKIDEALLRKIDFDAPKPGFAVLVKDKRPIVRIAGEAPITVGDLANAVGEKFFHGVEKP HHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEECCCCCEEHHHHHHHHHHHHHHHCCCH QQEKRVDKLKRPRLDGLIYKRVFTKEARVRKLDQSEEYLRAVEDQENSMVFGTFVQRVLV HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEHHHHHHHHHC PDVSLKDEDLRAYYDGHRDEFTSAPLYRLEQVAFADMKGAQRAAERLARGTDFKWLKANA CCCCCCCHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCC EGQLPPAQRALDFEGQLLSAKGLPEDLAGALGSAQVGDYRLHQGPRGQGYVVLVVSRTEP CCCCCHHHHHCCCCCCEECCCCCCHHHHHHCCCCCCCCEEECCCCCCCCEEEEEEECCCC QVQPYAEARPDIQKKLFGQALNRAVTDWAAKLRAAHEIETFITRIGN CCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA