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The map label for this gene is 220918243

Identifier: 220918243

GI number: 220918243

Start: 3476331

End: 3477476

Strand: Reverse

Name: 220918243

Synonym: A2cp1_3146

Alternate gene names: NA

Gene position: 3477476-3476331 (Counterclockwise)

Preceding gene: 220918248

Following gene: 220918240

Centisome position: 69.14

GC content: 78.62

Gene sequence:

>1146_bases
GTGGAGGGGATGCGCGCCATCGAGAGGCTCCAGGAGATCGGGCTGCGCCGCGCCGGCACGCCGCGCACCGGGTTCCGCTG
GGTCCGCCCGGACGGCCGCCCGGCGGCCGCGGAGGACGCCGAGCGCGCGCGGCGCCTCGCGCTGCCGCCGGCGTGGACGG
ACGTGCGGGTCAGCCCGGTCGCCGGCGCCAAGCTGCAGGCGATCGGCCGGGATCGCGCCGGACGCTGGCAGTACCGCTAT
CACCCGGAGTTCATGCGCCGCCGCTCCGGGGCGAAGTACCGGCGGCTGCTCCGCTTCGCCGCCGCGCTCCCGAGGATCCG
CGCGCGCGTGACCCGCGACCTGCGCCGCCGCGGCCTGGGGCGGGAGCGGGTGCTCGCGGCGATGGTGCGGATCCTCGCCA
CCTGCCCGATGCGGCCGGGCAGCGAGGCGTACGCGCGCGAGCACGGGAGCTACGGGCTCACCACGGTCCGGCCCCGGCAC
GTGCGCGTGCAGGGCGACCGGCTCGTGTTCGACTACCGCGGCAAGTCCGGCAAGCGGCAGGTGCGCGAGCTGGAGGACGC
GCCGGTGGCGCGGCTGGTGCGCACGCTGCTGCGAGTGCCGGGGCGCGACGTGTTCAAGTTCGAGGAGGAGGGCGAGGTGG
TGGACGTGCGGCGCCGCCACCTGAACGCGTACCTGCGCGAGGCGGCGGGGGCGCCGTTCACCGCGAAGGACTTCCGGACC
TGGGCCGGCACGGTGCTCTGCGCGAGCGAGCTGGCGCGGCGGGAGCGGGAGATCGTCCCGGGTCGGACCAGCCGGCGGCA
GCTCGAGGTCGCCGCGGTGAAGGTCGTCGCGGGCAGGCTCGGCAACACGCCGTCGGTGGCGCGCGCCTCGTACGTGAGCC
CGGCCGTGCTGCAGGCGTTCGGGCGGGGGAAGGTGATCGGCTGCTGCTACGCGCCGGACGAGGTCGGCGTGGCCGTGACG
CGCGGGTTGCACCGGGTCGAGGCGGCGCTGGTCCGGCTCCTGCGCGAGGAGGAGGCGCCGGCCCCGAGGGCCGGGGCGGC
GCCGGCGTCCCGCGTCGGGGGCGCGCCCATCGCCCGCCCGGCCGGGAGGCCCGGCTTCGCCGCGCGCGACCGGATCCGCG
CGGCGGCGCGGGCGCCGGCCCCGTGA

Upstream 100 bases:

>100_bases
TCCAGCCCGGGCGCAGCGTCCGGGCTCCTCGATCCGGATACCCCAGGGCGCCGGGAGCGTCCAGCGCCGGGCGTGCCGCG
CGGGCCGGAGGTGCGCATCC

Downstream 100 bases:

>100_bases
GCCGATGGCGCGCGGTCAGGGCGCCGGCTGCCACGCGCGCACCCAGTCCACCTCCATGAAGTCGTCGCTCGTCGCCGCGG
GTCCGTAGCCGCCGGCGGGG

Product: type I topoisomerase

Products: NA

Alternate protein names: DNA poisomerase I; DNA poisomerase Type I; DNA poisomerase IB; Type I poisomerase; DNA poisomerase I Protein; Poisomerase IB; Poisomerase IB-Like Protein; DNA poisomerase I-Like Protein; Viral-Like DNA poisomerase; DNA poisomerase ; Eukaryotic-Like DNA poisomerase I; DNA poisomerasei; -Like DNA poisomerase I; Type I DNA poisomerase

Number of amino acids: Translated: 381; Mature: 381

Protein sequence:

>381_residues
MEGMRAIERLQEIGLRRAGTPRTGFRWVRPDGRPAAAEDAERARRLALPPAWTDVRVSPVAGAKLQAIGRDRAGRWQYRY
HPEFMRRRSGAKYRRLLRFAAALPRIRARVTRDLRRRGLGRERVLAAMVRILATCPMRPGSEAYAREHGSYGLTTVRPRH
VRVQGDRLVFDYRGKSGKRQVRELEDAPVARLVRTLLRVPGRDVFKFEEEGEVVDVRRRHLNAYLREAAGAPFTAKDFRT
WAGTVLCASELARREREIVPGRTSRRQLEVAAVKVVAGRLGNTPSVARASYVSPAVLQAFGRGKVIGCCYAPDEVGVAVT
RGLHRVEAALVRLLREEEAPAPRAGAAPASRVGGAPIARPAGRPGFAARDRIRAAARAPAP

Sequences:

>Translated_381_residues
MEGMRAIERLQEIGLRRAGTPRTGFRWVRPDGRPAAAEDAERARRLALPPAWTDVRVSPVAGAKLQAIGRDRAGRWQYRY
HPEFMRRRSGAKYRRLLRFAAALPRIRARVTRDLRRRGLGRERVLAAMVRILATCPMRPGSEAYAREHGSYGLTTVRPRH
VRVQGDRLVFDYRGKSGKRQVRELEDAPVARLVRTLLRVPGRDVFKFEEEGEVVDVRRRHLNAYLREAAGAPFTAKDFRT
WAGTVLCASELARREREIVPGRTSRRQLEVAAVKVVAGRLGNTPSVARASYVSPAVLQAFGRGKVIGCCYAPDEVGVAVT
RGLHRVEAALVRLLREEEAPAPRAGAAPASRVGGAPIARPAGRPGFAARDRIRAAARAPAP
>Mature_381_residues
MEGMRAIERLQEIGLRRAGTPRTGFRWVRPDGRPAAAEDAERARRLALPPAWTDVRVSPVAGAKLQAIGRDRAGRWQYRY
HPEFMRRRSGAKYRRLLRFAAALPRIRARVTRDLRRRGLGRERVLAAMVRILATCPMRPGSEAYAREHGSYGLTTVRPRH
VRVQGDRLVFDYRGKSGKRQVRELEDAPVARLVRTLLRVPGRDVFKFEEEGEVVDVRRRHLNAYLREAAGAPFTAKDFRT
WAGTVLCASELARREREIVPGRTSRRQLEVAAVKVVAGRLGNTPSVARASYVSPAVLQAFGRGKVIGCCYAPDEVGVAVT
RGLHRVEAALVRLLREEEAPAPRAGAAPASRVGGAPIARPAGRPGFAARDRIRAAARAPAP

Specific function: Unknown

COG id: COG3569

COG function: function code L; Topoisomerase IB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42294; Mature: 42294

Theoretical pI: Translated: 12.08; Mature: 12.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEGMRAIERLQEIGLRRAGTPRTGFRWVRPDGRPAAAEDAERARRLALPPAWTDVRVSPV
CCHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHCCCCCCCCCEECCC
AGAKLQAIGRDRAGRWQYRYHPEFMRRRSGAKYRRLLRFAAALPRIRARVTRDLRRRGLG
CCCHHHHHCCCCCCCCCEEECHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
RERVLAAMVRILATCPMRPGSEAYAREHGSYGLTTVRPRHVRVQGDRLVFDYRGKSGKRQ
HHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCEECCCCEEEEECCEEEEEECCCCHHHH
VRELEDAPVARLVRTLLRVPGRDVFKFEEEGEVVDVRRRHLNAYLREAAGAPFTAKDFRT
HHHHHCCHHHHHHHHHHHCCCCHHEEECCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHH
WAGTVLCASELARREREIVPGRTSRRQLEVAAVKVVAGRLGNTPSVARASYVSPAVLQAF
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHC
GRGKVIGCCYAPDEVGVAVTRGLHRVEAALVRLLREEEAPAPRAGAAPASRVGGAPIARP
CCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCC
AGRPGFAARDRIRAAARAPAP
CCCCCCHHHHHHHHHHCCCCC
>Mature Secondary Structure
MEGMRAIERLQEIGLRRAGTPRTGFRWVRPDGRPAAAEDAERARRLALPPAWTDVRVSPV
CCHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHCCCCCCCCCEECCC
AGAKLQAIGRDRAGRWQYRYHPEFMRRRSGAKYRRLLRFAAALPRIRARVTRDLRRRGLG
CCCHHHHHCCCCCCCCCEEECHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
RERVLAAMVRILATCPMRPGSEAYAREHGSYGLTTVRPRHVRVQGDRLVFDYRGKSGKRQ
HHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCEECCCCEEEEECCEEEEEECCCCHHHH
VRELEDAPVARLVRTLLRVPGRDVFKFEEEGEVVDVRRRHLNAYLREAAGAPFTAKDFRT
HHHHHCCHHHHHHHHHHHCCCCHHEEECCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHH
WAGTVLCASELARREREIVPGRTSRRQLEVAAVKVVAGRLGNTPSVARASYVSPAVLQAF
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHHHHC
GRGKVIGCCYAPDEVGVAVTRGLHRVEAALVRLLREEEAPAPRAGAAPASRVGGAPIARP
CCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCC
AGRPGFAARDRIRAAARAPAP
CCCCCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA