| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is rstB [H]
Identifier: 220918234
GI number: 220918234
Start: 3467940
End: 3469349
Strand: Reverse
Name: rstB [H]
Synonym: A2cp1_3137
Alternate gene names: 220918234
Gene position: 3469349-3467940 (Counterclockwise)
Preceding gene: 220918235
Following gene: 220918233
Centisome position: 68.98
GC content: 79.79
Gene sequence:
>1410_bases GTGAGCGGCGGCGCCGGGGGCGGCGGCCCGTCCCGGCTCGGGCTGCGCATCTACCTCGTCACGGTCGTGGCGGTGCTCGC GACCGGCGTCGCGGTGCTCCTCGCGCTCGCGCTCGCGCGGGACCGCCGCGAGCCGGTCCGGCGGGACGTCATGCACGCGG TCGCCCGCGACGCCGCGGCGCGGGTGGCGACGCAGTGGGGCTCGGCCGGCGCCATCCAGGAGGTGATCGGGCCGCTCGCC TCGGCGCTGCGCGTGAGCGTCGCCGTGTACGGCGCCGGAGGCGAGCCGGTGGCGAGCGCCGGCGAGGCGATGCGCCCGCC GCTCCCACCGCCGCCGGAGCGCGAGCGGTTCACGGACCGCCTCGGGCCCGGGCCGCCCGGCGCGGGAGGACGGGAGCGGC ACGTGGTGTCGGCGGTCGCGCCCGTGGTCGTCGCCGGCGCGCCGGTGGGGTTCCTCGTCGTCGCGCAGCAGGTCCCGGGC GGTCGCCCGCCGCCCGTCCTGCTCGTCCTCGTCGCGCTGGCGCTGGTCGGCGCGGGCGTCGCGGCGGTGGTGCTGGGCGG CTCGCTCGCGCGGCCGCTCGACCGGCTGGCGCGCACCGCCCGCGCGCTCGGCGCGGGCGACCTCGCGGCGCGGACCGGGA TCTCGCGGGCGGACGAGCTCGGGGCCGTCGCGCGCGCGTTCGACGAGATGGCCGACCGCGTCGGCGCGCTGCTCCGCTCC AGCACCGAGCTGATGGCCAACGTGGCCCACGAGCTGCGCACCCCGCTCGCCCGCATCCGCGTGGCGCTCGACCTCGCCGC CGAAGGCGACGCCGACGTCGCGCGCGCGTCGCTCGCGGACATCGCGGAGGACCTGTCCGAGCTGGAGCGCCTGGTGGACG ACGTGCTCGCCTCGGCGCGGCTCGACCTGGCGGGGAACGGCGCCTCCTCCGCGGGCGGGGCGCCACCGCTCCGCCGGGCG CGGCTGGACCCCGCGGGCGTGGTGCGGCAGGCGGTGGAGCGCCTCGGGCACCGCCACCCGGATCGCGCCGTCCGGCTCGA GCTCGGGCCCGACCTGCCCGAAGTCGAGGCGGACGCGGTGCTGCTGCGCCGCGCGCTGGACAACCTGCTCGACAACGCGC GCAAGTACTCGGCGCCGGCCTCGCCGATCCGCGTGGAGGCGGCGCGCCGCGGCGCGGACCTGGTGGTCGAGGTGAGCGAT CGCGGTGAGGGGATCGCCGCCGAGGAGCTGGAGCGCGTGTTCTCGCCGTTCTACCGGGTGGACCGCAGCCGCGCGCGCGC CACCGGCGGCGTCGGCCTCGGGCTCCCGCTCGCGCGCCGCATCGCCGAGGCGCACGGCGGCACGCTCACGGCGCGCAGCA CGCCGGGGGAGGGCACCACCCTCACGCTGACCATCCCGGGCGTTCGCTGA
Upstream 100 bases:
>100_bases CGCGCCTGCGCCACAAGCTCGGCGACGACCCTCGCCGGCCCGCGCTCCTCAAGACGGTCCGCGGCGCCGGGTACGTGCTC GCCGCCGGGCCGGAGGGCGC
Downstream 100 bases:
>100_bases CGGCGGGCCGCGTCGGCACCACCGGGGCGGACGGGCGGGCATCCGGCCGCGCCGCTCCGGCCCGGCGCGGGCGCGGCACG GGAAAGCCTCCACCGTCGCC
Product: histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 469; Mature: 468
Protein sequence:
>469_residues MSGGAGGGGPSRLGLRIYLVTVVAVLATGVAVLLALALARDRREPVRRDVMHAVARDAAARVATQWGSAGAIQEVIGPLA SALRVSVAVYGAGGEPVASAGEAMRPPLPPPPERERFTDRLGPGPPGAGGRERHVVSAVAPVVVAGAPVGFLVVAQQVPG GRPPPVLLVLVALALVGAGVAAVVLGGSLARPLDRLARTARALGAGDLAARTGISRADELGAVARAFDEMADRVGALLRS STELMANVAHELRTPLARIRVALDLAAEGDADVARASLADIAEDLSELERLVDDVLASARLDLAGNGASSAGGAPPLRRA RLDPAGVVRQAVERLGHRHPDRAVRLELGPDLPEVEADAVLLRRALDNLLDNARKYSAPASPIRVEAARRGADLVVEVSD RGEGIAAEELERVFSPFYRVDRSRARATGGVGLGLPLARRIAEAHGGTLTARSTPGEGTTLTLTIPGVR
Sequences:
>Translated_469_residues MSGGAGGGGPSRLGLRIYLVTVVAVLATGVAVLLALALARDRREPVRRDVMHAVARDAAARVATQWGSAGAIQEVIGPLA SALRVSVAVYGAGGEPVASAGEAMRPPLPPPPERERFTDRLGPGPPGAGGRERHVVSAVAPVVVAGAPVGFLVVAQQVPG GRPPPVLLVLVALALVGAGVAAVVLGGSLARPLDRLARTARALGAGDLAARTGISRADELGAVARAFDEMADRVGALLRS STELMANVAHELRTPLARIRVALDLAAEGDADVARASLADIAEDLSELERLVDDVLASARLDLAGNGASSAGGAPPLRRA RLDPAGVVRQAVERLGHRHPDRAVRLELGPDLPEVEADAVLLRRALDNLLDNARKYSAPASPIRVEAARRGADLVVEVSD RGEGIAAEELERVFSPFYRVDRSRARATGGVGLGLPLARRIAEAHGGTLTARSTPGEGTTLTLTIPGVR >Mature_468_residues SGGAGGGGPSRLGLRIYLVTVVAVLATGVAVLLALALARDRREPVRRDVMHAVARDAAARVATQWGSAGAIQEVIGPLAS ALRVSVAVYGAGGEPVASAGEAMRPPLPPPPERERFTDRLGPGPPGAGGRERHVVSAVAPVVVAGAPVGFLVVAQQVPGG RPPPVLLVLVALALVGAGVAAVVLGGSLARPLDRLARTARALGAGDLAARTGISRADELGAVARAFDEMADRVGALLRSS TELMANVAHELRTPLARIRVALDLAAEGDADVARASLADIAEDLSELERLVDDVLASARLDLAGNGASSAGGAPPLRRAR LDPAGVVRQAVERLGHRHPDRAVRLELGPDLPEVEADAVLLRRALDNLLDNARKYSAPASPIRVEAARRGADLVVEVSDR GEGIAAEELERVFSPFYRVDRSRARATGGVGLGLPLARRIAEAHGGTLTARSTPGEGTTLTLTIPGVR
Specific function: Member of the two-component regulatory system rstB/rstA. RstB functions as a membrane-associated protein kinase that phosphorylates rstA (Potential) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1787894, Length=315, Percent_Identity=33.015873015873, Blast_Score=135, Evalue=6e-33, Organism=Escherichia coli, GI1788393, Length=276, Percent_Identity=30.0724637681159, Blast_Score=132, Evalue=4e-32, Organism=Escherichia coli, GI1786783, Length=308, Percent_Identity=29.5454545454545, Blast_Score=111, Evalue=1e-25, Organism=Escherichia coli, GI1789808, Length=293, Percent_Identity=30.0341296928328, Blast_Score=102, Evalue=6e-23, Organism=Escherichia coli, GI1786600, Length=283, Percent_Identity=30.0353356890459, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI1786912, Length=230, Percent_Identity=33.0434782608696, Blast_Score=96, Evalue=4e-21, Organism=Escherichia coli, GI1790346, Length=277, Percent_Identity=26.3537906137184, Blast_Score=94, Evalue=1e-20, Organism=Escherichia coli, GI1790436, Length=228, Percent_Identity=29.8245614035088, Blast_Score=89, Evalue=5e-19, Organism=Escherichia coli, GI48994928, Length=248, Percent_Identity=29.4354838709677, Blast_Score=89, Evalue=7e-19, Organism=Escherichia coli, GI1790551, Length=294, Percent_Identity=30.6122448979592, Blast_Score=85, Evalue=8e-18, Organism=Escherichia coli, GI1788549, Length=226, Percent_Identity=27.8761061946903, Blast_Score=82, Evalue=5e-17, Organism=Escherichia coli, GI87082128, Length=311, Percent_Identity=26.6881028938907, Blast_Score=82, Evalue=5e-17, Organism=Escherichia coli, GI1789149, Length=240, Percent_Identity=28.75, Blast_Score=82, Evalue=9e-17, Organism=Escherichia coli, GI145693157, Length=254, Percent_Identity=27.9527559055118, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI87081816, Length=232, Percent_Identity=29.7413793103448, Blast_Score=80, Evalue=3e-16, Organism=Escherichia coli, GI1790861, Length=348, Percent_Identity=27.0114942528736, Blast_Score=73, Evalue=4e-14, Organism=Escherichia coli, GI1788713, Length=235, Percent_Identity=24.6808510638298, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1789403, Length=321, Percent_Identity=27.1028037383178, Blast_Score=62, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 48204; Mature: 48073
Theoretical pI: Translated: 10.29; Mature: 10.29
Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGGAGGGGPSRLGLRIYLVTVVAVLATGVAVLLALALARDRREPVRRDVMHAVARDAAA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RVATQWGSAGAIQEVIGPLASALRVSVAVYGAGGEPVASAGEAMRPPLPPPPERERFTDR HHHHHCCCCCHHHHHHHHHHHHHHHHHEEECCCCCCHHHCCCCCCCCCCCCCCHHHHHHH LGPGPPGAGGRERHVVSAVAPVVVAGAPVGFLVVAQQVPGGRPPPVLLVLVALALVGAGV CCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHEEEHHCCCCCCHHHHHHHHHHHHHHCCH AAVVLGGSLARPLDRLARTARALGAGDLAARTGISRADELGAVARAFDEMADRVGALLRS HHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH STELMANVAHELRTPLARIRVALDLAAEGDADVARASLADIAEDLSELERLVDDVLASAR HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LDLAGNGASSAGGAPPLRRARLDPAGVVRQAVERLGHRHPDRAVRLELGPDLPEVEADAV CCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHH LLRRALDNLLDNARKYSAPASPIRVEAARRGADLVVEVSDRGEGIAAEELERVFSPFYRV HHHHHHHHHHHHHHHCCCCCCCEEHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHH DRSRARATGGVGLGLPLARRIAEAHGGTLTARSTPGEGTTLTLTIPGVR HHHHHHHCCCCCCCHHHHHHHHHHCCCEEEECCCCCCCCEEEEECCCCC >Mature Secondary Structure SGGAGGGGPSRLGLRIYLVTVVAVLATGVAVLLALALARDRREPVRRDVMHAVARDAAA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RVATQWGSAGAIQEVIGPLASALRVSVAVYGAGGEPVASAGEAMRPPLPPPPERERFTDR HHHHHCCCCCHHHHHHHHHHHHHHHHHEEECCCCCCHHHCCCCCCCCCCCCCCHHHHHHH LGPGPPGAGGRERHVVSAVAPVVVAGAPVGFLVVAQQVPGGRPPPVLLVLVALALVGAGV CCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHEEEHHCCCCCCHHHHHHHHHHHHHHCCH AAVVLGGSLARPLDRLARTARALGAGDLAARTGISRADELGAVARAFDEMADRVGALLRS HHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH STELMANVAHELRTPLARIRVALDLAAEGDADVARASLADIAEDLSELERLVDDVLASAR HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LDLAGNGASSAGGAPPLRRARLDPAGVVRQAVERLGHRHPDRAVRLELGPDLPEVEADAV CCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHH LLRRALDNLLDNARKYSAPASPIRVEAARRGADLVVEVSDRGEGIAAEELERVFSPFYRV HHHHHHHHHHHHHHHCCCCCCCEEHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHH DRSRARATGGVGLGLPLARRIAEAHGGTLTARSTPGEGTTLTLTIPGVR HHHHHHHCCCCCCCHHHHHHHHHHCCCEEEECCCCCCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503; 2646639; 1925016; 1495392 [H]