| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is 220918213
Identifier: 220918213
GI number: 220918213
Start: 3439317
End: 3439862
Strand: Reverse
Name: 220918213
Synonym: A2cp1_3116
Alternate gene names: NA
Gene position: 3439862-3439317 (Counterclockwise)
Preceding gene: 220918214
Following gene: 220918200
Centisome position: 68.4
GC content: 76.01
Gene sequence:
>546_bases ATGAGCGGATCACTCATCATCAACGCGCGTCACCGGCTGGCCTGGTACCAGCGGCTGCTCTCCGATGCCTCCACCGCCGT CATGTGGGGCGCCTGGCTCTGGCTGTGGGTCCCCATCCTCCGCGCCGTCGCCGAGCTCGGGATGCGCTCCTCGCCGGTGC TGGTGAAGCTGGTGGCGAACGGGACGGCCGGGGACCTCCCCAGCTCCGTGATGGCGCTGGTGGGGACCTCCGGCACGCTG CTGGTGTGGAAGGGCCTGCCGGCGCGCAAGGCGCTCGCCGACGACGAGGCGCTCTCGCTCCGCGACTACGCGCGCCACTT CGCGCTGCCCGAGTCCTCGCTCCAGGCCGGCCGCCGCGCCGCCGTGTGCGTGGTCCACCACGACGACGAGGGCCGGATCG TCCGCCTGGAGTGCCGCGGGCCGGTGGCGACTCCCGCCCCCGCCGAGCGCCGCAGCCCGCCCGTGGTCGAGCCGCTCGAG CCCGCCGGCTGCGGCGCGGCCCTCGCCTGCGAGCCGGTCGCCCGCGGCCAGGCGGTCGCGGCCTAG
Upstream 100 bases:
>100_bases ACGTCCCCTTGCGGCCCCCGGGCCGGCGCAGCGGCCGGCCCGGCGGATGGAGACGGCAGGCGGAGCAGGTGGCGCGCCGC AGCGAAGGCGAAGGATGGAC
Downstream 100 bases:
>100_bases CGTCGCGCGCGTCCGCCGGCGCCGCGCGGCGGGCGCGGTGGCGCGAGCAGCGCCTGCAGCCCGGCGAGCTGGAACCGCCA GAACGCGCCGAACGCCGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 181; Mature: 180
Protein sequence:
>181_residues MSGSLIINARHRLAWYQRLLSDASTAVMWGAWLWLWVPILRAVAELGMRSSPVLVKLVANGTAGDLPSSVMALVGTSGTL LVWKGLPARKALADDEALSLRDYARHFALPESSLQAGRRAAVCVVHHDDEGRIVRLECRGPVATPAPAERRSPPVVEPLE PAGCGAALACEPVARGQAVAA
Sequences:
>Translated_181_residues MSGSLIINARHRLAWYQRLLSDASTAVMWGAWLWLWVPILRAVAELGMRSSPVLVKLVANGTAGDLPSSVMALVGTSGTL LVWKGLPARKALADDEALSLRDYARHFALPESSLQAGRRAAVCVVHHDDEGRIVRLECRGPVATPAPAERRSPPVVEPLE PAGCGAALACEPVARGQAVAA >Mature_180_residues SGSLIINARHRLAWYQRLLSDASTAVMWGAWLWLWVPILRAVAELGMRSSPVLVKLVANGTAGDLPSSVMALVGTSGTLL VWKGLPARKALADDEALSLRDYARHFALPESSLQAGRRAAVCVVHHDDEGRIVRLECRGPVATPAPAERRSPPVVEPLEP AGCGAALACEPVARGQAVAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19230; Mature: 19098
Theoretical pI: Translated: 8.67; Mature: 8.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGSLIINARHRLAWYQRLLSDASTAVMWGAWLWLWVPILRAVAELGMRSSPVLVKLVAN CCCCEEEECHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEC GTAGDLPSSVMALVGTSGTLLVWKGLPARKALADDEALSLRDYARHFALPESSLQAGRRA CCCCCCHHHHHHHHCCCCCEEEEECCCHHHHHCCCHHHHHHHHHHHHCCCHHHHHCCCEE AVCVVHHDDEGRIVRLECRGPVATPAPAERRSPPVVEPLEPAGCGAALACEPVARGQAVA EEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCC A C >Mature Secondary Structure SGSLIINARHRLAWYQRLLSDASTAVMWGAWLWLWVPILRAVAELGMRSSPVLVKLVAN CCCEEEECHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEC GTAGDLPSSVMALVGTSGTLLVWKGLPARKALADDEALSLRDYARHFALPESSLQAGRRA CCCCCCHHHHHHHHCCCCCEEEEECCCHHHHHCCCHHHHHHHHHHHHCCCHHHHHCCCEE AVCVVHHDDEGRIVRLECRGPVATPAPAERRSPPVVEPLEPAGCGAALACEPVARGQAVA EEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCC A C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA