| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is 220918183
Identifier: 220918183
GI number: 220918183
Start: 3408603
End: 3409082
Strand: Reverse
Name: 220918183
Synonym: A2cp1_3086
Alternate gene names: NA
Gene position: 3409082-3408603 (Counterclockwise)
Preceding gene: 220918184
Following gene: 220918182
Centisome position: 67.78
GC content: 73.54
Gene sequence:
>480_bases ATGAGCCCGCCCGCGCCCCCCATCGCCCTCGAGGCCGCCACCGCCCCCTCGCGCAAGGGCGCCCAGCTCGTCCCCGAGCC GTTCGCGACGCGCCTCGCGCGGCGGGTCAAGCACGCCCTCGGGGATCCGTTCGGTCTGAAGGCGTTCGGGGTGAACCTCA TGCGGCTGCCCGCCGGCGACACCTCGGCCATCCACCACCGGCACACGGTGCAGGACGAGTTCGTGTACGTCCTCGAGGGC CACCCGACGCTCGTCACCGACGACGGCGACGTGCAGCTCGCCCCCGGGATGTGCGCCGGCTTCCCCGCGAGCGGGCGGGC GCACCACCTCGAGAACCGCACCCAGCAGGACGTCGTCGTGCTGGAGGTGGGCGACCGCGCCACCGGCGATCAGGTGATCT ACCCGATGGACGACCTCATGCTCGTGCCCGGGCCGGACGGCCGGCGGCGCTTCGTGCACAAGGACGGGACGCCGTACTGA
Upstream 100 bases:
>100_bases CCGCCGAGGGCTGCTGGTGGCGGTGGCGGTCGAATGCGAGGCGGCCGGCGCCGCGGGCGCTATGCTCCGCGCCCCACCGT CCGCCACGAAGGAGCACCGC
Downstream 100 bases:
>100_bases GCGCCGCGCTTGGCGGTCCGGGCCGGCGAGGGTAGGTTCGGGCGGATGCCGCCGCCCGAGCGCCACCTGCTCCTCGCCCG CCACGGCGAGACCGACTGGA
Product: Cupin 2 barrel domain-containing protein
Products: NA
Alternate protein names: Cupin 2 Conserved Barrel Domain Protein; Cupin Domain Protein; Cupin Domain-Containing Protein; Cupin 2 Protein; Transcriptional Regulator Protein; Cupin 2 Conserved Barrel Domain-Containing Protein; Homologue Of Hemolysin Protein; Sugar Oxidoreductase
Number of amino acids: Translated: 159; Mature: 158
Protein sequence:
>159_residues MSPPAPPIALEAATAPSRKGAQLVPEPFATRLARRVKHALGDPFGLKAFGVNLMRLPAGDTSAIHHRHTVQDEFVYVLEG HPTLVTDDGDVQLAPGMCAGFPASGRAHHLENRTQQDVVVLEVGDRATGDQVIYPMDDLMLVPGPDGRRRFVHKDGTPY
Sequences:
>Translated_159_residues MSPPAPPIALEAATAPSRKGAQLVPEPFATRLARRVKHALGDPFGLKAFGVNLMRLPAGDTSAIHHRHTVQDEFVYVLEG HPTLVTDDGDVQLAPGMCAGFPASGRAHHLENRTQQDVVVLEVGDRATGDQVIYPMDDLMLVPGPDGRRRFVHKDGTPY >Mature_158_residues SPPAPPIALEAATAPSRKGAQLVPEPFATRLARRVKHALGDPFGLKAFGVNLMRLPAGDTSAIHHRHTVQDEFVYVLEGH PTLVTDDGDVQLAPGMCAGFPASGRAHHLENRTQQDVVVLEVGDRATGDQVIYPMDDLMLVPGPDGRRRFVHKDGTPY
Specific function: Unknown
COG id: COG3837
COG function: function code S; Uncharacterized conserved protein, contains double-stranded beta-helix domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17189; Mature: 17058
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPPAPPIALEAATAPSRKGAQLVPEPFATRLARRVKHALGDPFGLKAFGVNLMRLPAGD CCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHCEEEEEECCCC TSAIHHRHTVQDEFVYVLEGHPTLVTDDGDVQLAPGMCAGFPASGRAHHLENRTQQDVVV CCCHHCCCCCCCCEEEEEECCCEEEECCCCEEECCCCCCCCCCCCCCHHCCCCCCCCEEE LEVGDRATGDQVIYPMDDLMLVPGPDGRRRFVHKDGTPY EEECCCCCCCEEEEECCCEEEEECCCCCEEEECCCCCCC >Mature Secondary Structure SPPAPPIALEAATAPSRKGAQLVPEPFATRLARRVKHALGDPFGLKAFGVNLMRLPAGD CCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHCEEEEEECCCC TSAIHHRHTVQDEFVYVLEGHPTLVTDDGDVQLAPGMCAGFPASGRAHHLENRTQQDVVV CCCHHCCCCCCCCEEEEEECCCEEEECCCCEEECCCCCCCCCCCCCCHHCCCCCCCCEEE LEVGDRATGDQVIYPMDDLMLVPGPDGRRRFVHKDGTPY EEECCCCCCCEEEEECCCEEEEECCCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA