Click here to switch to the map view.

The map label for this gene is 220917446

Identifier: 220917446

GI number: 220917446

Start: 2599776

End: 2601440

Strand: Direct

Name: 220917446

Synonym: A2cp1_2346

Alternate gene names: NA

Gene position: 2599776-2601440 (Clockwise)

Preceding gene: 220917445

Following gene: 220917448

Centisome position: 51.69

GC content: 81.5

Gene sequence:

>1665_bases
ATGCGGCGATCCCGAACCGCCCGCCGGTCCGCCGCGCGTACCGCGATCGCGGCCGCGCTGGCGGCGTTGGTCGGCGCCTG
CGCGGGGCCGGCGCGCGCGCCCTCCCCCGGCGCCATGCCGCCGGCCGCGGCGACGAGCGGGTCCCCCCACCCTGCCCCGT
CGTCGGCCGCGCCCGCGCCCTCCGCGGCCGAGCCGCCCGGCACGGCCTACGGCCGCGAGCCCGCGGTCCAGGCCACCCGG
ATCGAGACCGAGGCGCTCGGCGCCGCCGCGGGCCGCCTCTCCGCGCGCGGCGCCCCGCGCACCTCGTCGGTCCTCTCGCT
CGCCGCGCGCGAGCTCGCCGCCCTCGCCGCGACCGGCGCGGAGGAGCCGCTCGCCCGCGAGCACCTCCGCGGCGCGCTGG
CGCACGCGGGCGCCTACGACCCCGCGCCGGCGGCCTACCTGGTGCGCACCGCGCCAGACCGCGCGGCCGCGGCCCTCGCC
GACGTCATCCCGCGCGGCACCGCCACGCACGTGGGCGCCGGCGCGGCGCAGGCGGACGGGTCGGCGTTCGTGGTGATCCT
GGCGTCGGACCGCAAGGTCCGCCTCGAGCCGGTCCCCCGCCGCGTGGCCGAGGGCGCCTCGGCGACGATCGCCGGCGCGC
TGCTCGGCGGCCTCACGCGCCCGCGCGTCTTCGTCACCTCGCCCGCGGGCGCCGTCCACGAGGAGGCGGTCACGGGCGGC
CCGGACGGCTTCCGGGCGCGCGTCGCGTTCGCCGCCGCCGGGCGGCACGTGGTCGAGGTGCTCGCGCACGGCCGCGGCGG
GCCCGAGGTCGCGGCCCTGCTCGAGGTGCAGTCCGGCGCGCCCGCGGCCCCCGCGGCGCAGCCGGTGCCCGCGCGGCGGC
CCGCGCCGGAGCCCGGGGACGCCTCGGCCGCGGAGGCCGGCGTGGTGCGCGCCATCAACGCGCTCCGCGCCGCGCGCGGG
CTCCAGGCCGTGACGGCCGCGCCCCGGCTCACCGAGGCCGCCCGCGCGCACAGCGCGAACATGCTCGCGCAGGGCAAGGT
GGCGCACGTGCTCCCGGGCACGGGCGAGCTGGTCGAGCGCCTCGCCCGCGCCCGCATCGCCTACCGGCGCGCCTACGAGA
ACGTGGCCCGCGCCTCGACCGCGCTCGAGGCGCACCGGGCCGCGGAGGAGAGCCCGGCGCACCTCGGCAACCTGCTCCAG
CCCGGCGTGTCGAGCGTGGGCGTCGGGATCGCGCGGGGCCGGCTGTCGTCCGGCGACCCCACCGTCTACCTGACCGAGAT
CCTGATCGAGCCGCCGGACGACGGCGCCGGCTCGCGGCTCACGCCCGACGCGCGGGTGCGGGAGGCGATCTGGGCCCAGC
GCGCGCGCCTGGGGCGGGCGCCGCTCACCGCCGACCTGCGCCTCGACGCGCTCGCGCGCGAGGCCGCGGTGGGCATGCGG
GCCCGCGACGAGACCGACCCGGGCGACGTCGAGGTGCGCGCGCTGAAGCTCCGGCGCCGGATCGCCGCGGTGGACGTGTT
CGTGGTGAGCGGTCCGGGCGAGGCGGCCCGGTCCGCGAACGTCGGCGACGGACGCTTCGCCCGGGTGGGCGTGGGCGCGG
TGCAGGGGGACAGCCGCCGGTTCGGGCCGGGGCGGCTGTTCGTCGCGGTGATCTACACGGACTGA

Upstream 100 bases:

>100_bases
CCGAGCTGGCCCACATGCTGTGCGAGCGCGTGAACGCGCGCATGGGGCGGGCGGTGGCGCTCGGCCTCGAGATCCGGATC
GGGCCGGAGCGCTGATCGGG

Downstream 100 bases:

>100_bases
CGGATCAGACGAGGCGACGCTGGGTGGCGTAGCTCTCGATGCCGCCCTCGACCTCCGGCTCGGCGGCGTGGAGCTGGCAG
CGCGTGCAGGTCCAGCTGTT

Product: SCP-like extracellular

Products: NA

Alternate protein names: Allergen V5/Tpx-1

Number of amino acids: Translated: 554; Mature: 554

Protein sequence:

>554_residues
MRRSRTARRSAARTAIAAALAALVGACAGPARAPSPGAMPPAAATSGSPHPAPSSAAPAPSAAEPPGTAYGREPAVQATR
IETEALGAAAGRLSARGAPRTSSVLSLAARELAALAATGAEEPLAREHLRGALAHAGAYDPAPAAYLVRTAPDRAAAALA
DVIPRGTATHVGAGAAQADGSAFVVILASDRKVRLEPVPRRVAEGASATIAGALLGGLTRPRVFVTSPAGAVHEEAVTGG
PDGFRARVAFAAAGRHVVEVLAHGRGGPEVAALLEVQSGAPAAPAAQPVPARRPAPEPGDASAAEAGVVRAINALRAARG
LQAVTAAPRLTEAARAHSANMLAQGKVAHVLPGTGELVERLARARIAYRRAYENVARASTALEAHRAAEESPAHLGNLLQ
PGVSSVGVGIARGRLSSGDPTVYLTEILIEPPDDGAGSRLTPDARVREAIWAQRARLGRAPLTADLRLDALAREAAVGMR
ARDETDPGDVEVRALKLRRRIAAVDVFVVSGPGEAARSANVGDGRFARVGVGAVQGDSRRFGPGRLFVAVIYTD

Sequences:

>Translated_554_residues
MRRSRTARRSAARTAIAAALAALVGACAGPARAPSPGAMPPAAATSGSPHPAPSSAAPAPSAAEPPGTAYGREPAVQATR
IETEALGAAAGRLSARGAPRTSSVLSLAARELAALAATGAEEPLAREHLRGALAHAGAYDPAPAAYLVRTAPDRAAAALA
DVIPRGTATHVGAGAAQADGSAFVVILASDRKVRLEPVPRRVAEGASATIAGALLGGLTRPRVFVTSPAGAVHEEAVTGG
PDGFRARVAFAAAGRHVVEVLAHGRGGPEVAALLEVQSGAPAAPAAQPVPARRPAPEPGDASAAEAGVVRAINALRAARG
LQAVTAAPRLTEAARAHSANMLAQGKVAHVLPGTGELVERLARARIAYRRAYENVARASTALEAHRAAEESPAHLGNLLQ
PGVSSVGVGIARGRLSSGDPTVYLTEILIEPPDDGAGSRLTPDARVREAIWAQRARLGRAPLTADLRLDALAREAAVGMR
ARDETDPGDVEVRALKLRRRIAAVDVFVVSGPGEAARSANVGDGRFARVGVGAVQGDSRRFGPGRLFVAVIYTD
>Mature_554_residues
MRRSRTARRSAARTAIAAALAALVGACAGPARAPSPGAMPPAAATSGSPHPAPSSAAPAPSAAEPPGTAYGREPAVQATR
IETEALGAAAGRLSARGAPRTSSVLSLAARELAALAATGAEEPLAREHLRGALAHAGAYDPAPAAYLVRTAPDRAAAALA
DVIPRGTATHVGAGAAQADGSAFVVILASDRKVRLEPVPRRVAEGASATIAGALLGGLTRPRVFVTSPAGAVHEEAVTGG
PDGFRARVAFAAAGRHVVEVLAHGRGGPEVAALLEVQSGAPAAPAAQPVPARRPAPEPGDASAAEAGVVRAINALRAARG
LQAVTAAPRLTEAARAHSANMLAQGKVAHVLPGTGELVERLARARIAYRRAYENVARASTALEAHRAAEESPAHLGNLLQ
PGVSSVGVGIARGRLSSGDPTVYLTEILIEPPDDGAGSRLTPDARVREAIWAQRARLGRAPLTADLRLDALAREAAVGMR
ARDETDPGDVEVRALKLRRRIAAVDVFVVSGPGEAARSANVGDGRFARVGVGAVQGDSRRFGPGRLFVAVIYTD

Specific function: Unknown

COG id: COG2340

COG function: function code S; Uncharacterized protein with SCP/PR1 domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56096; Mature: 56096

Theoretical pI: Translated: 11.42; Mature: 11.42

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00099 THIOLASE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRSRTARRSAARTAIAAALAALVGACAGPARAPSPGAMPPAAATSGSPHPAPSSAAPAP
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SAAEPPGTAYGREPAVQATRIETEALGAAAGRLSARGAPRTSSVLSLAARELAALAATGA
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCC
EEPLAREHLRGALAHAGAYDPAPAAYLVRTAPDRAAAALADVIPRGTATHVGAGAAQADG
CCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC
SAFVVILASDRKVRLEPVPRRVAEGASATIAGALLGGLTRPRVFVTSPAGAVHEEAVTGG
CEEEEEEECCCEEEECCHHHHHHCCCCHHHHHHHHHCCCCCEEEEECCCCCHHHHHHCCC
PDGFRARVAFAAAGRHVVEVLAHGRGGPEVAALLEVQSGAPAAPAAQPVPARRPAPEPGD
CCCHHHEEHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCC
ASAAEAGVVRAINALRAARGLQAVTAAPRLTEAARAHSANMLAQGKVAHVLPGTGELVER
CCHHHHHHHHHHHHHHHHHCHHHHHHCCHHHHHHHHHHCCHHHCCCEEEECCCCHHHHHH
LARARIAYRRAYENVARASTALEAHRAAEESPAHLGNLLQPGVSSVGVGIARGRLSSGDP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHCCHHHCCCCCCCCC
TVYLTEILIEPPDDGAGSRLTPDARVREAIWAQRARLGRAPLTADLRLDALAREAAVGMR
EEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCC
ARDETDPGDVEVRALKLRRRIAAVDVFVVSGPGEAARSANVGDGRFARVGVGAVQGDSRR
CCCCCCCCCHHHHHHHHHHHHEEEEEEEEECCCHHHHCCCCCCCCEEEEECEEECCCCCC
FGPGRLFVAVIYTD
CCCCEEEEEEEECC
>Mature Secondary Structure
MRRSRTARRSAARTAIAAALAALVGACAGPARAPSPGAMPPAAATSGSPHPAPSSAAPAP
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SAAEPPGTAYGREPAVQATRIETEALGAAAGRLSARGAPRTSSVLSLAARELAALAATGA
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCC
EEPLAREHLRGALAHAGAYDPAPAAYLVRTAPDRAAAALADVIPRGTATHVGAGAAQADG
CCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC
SAFVVILASDRKVRLEPVPRRVAEGASATIAGALLGGLTRPRVFVTSPAGAVHEEAVTGG
CEEEEEEECCCEEEECCHHHHHHCCCCHHHHHHHHHCCCCCEEEEECCCCCHHHHHHCCC
PDGFRARVAFAAAGRHVVEVLAHGRGGPEVAALLEVQSGAPAAPAAQPVPARRPAPEPGD
CCCHHHEEHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCC
ASAAEAGVVRAINALRAARGLQAVTAAPRLTEAARAHSANMLAQGKVAHVLPGTGELVER
CCHHHHHHHHHHHHHHHHHCHHHHHHCCHHHHHHHHHHCCHHHCCCEEEECCCCHHHHHH
LARARIAYRRAYENVARASTALEAHRAAEESPAHLGNLLQPGVSSVGVGIARGRLSSGDP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHCCHHHCCCCCCCCC
TVYLTEILIEPPDDGAGSRLTPDARVREAIWAQRARLGRAPLTADLRLDALAREAAVGMR
EEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCC
ARDETDPGDVEVRALKLRRRIAAVDVFVVSGPGEAARSANVGDGRFARVGVGAVQGDSRR
CCCCCCCCCHHHHHHHHHHHHEEEEEEEEECCCHHHHCCCCCCCCEEEEECEEECCCCCC
FGPGRLFVAVIYTD
CCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA