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The map label for this gene is yciO [H]

Identifier: 220917357

GI number: 220917357

Start: 2507224

End: 2507847

Strand: Direct

Name: yciO [H]

Synonym: A2cp1_2257

Alternate gene names: 220917357

Gene position: 2507224-2507847 (Clockwise)

Preceding gene: 220917356

Following gene: 220917358

Centisome position: 49.85

GC content: 70.99

Gene sequence:

>624_bases
ATGCCGGCCGCGCCCATCGTCGAGATCGACCCCCTCCACCCGCAGCCGCGCGTCGTCGAGCGCGCCGTCTCGGCGCTCTC
GTCCGGGGGCGTGATCGCGTACCCGACCGACACGTTCTACGGGATCGGCTGCGACCTGTTCGACAAGCGCGCCATCGAGC
GCATCTACCAGCTGAAGCAGCTCCCGCGCACCCACGAGCTGGCGTTCATCTGCCAGGATCTGGCGGAGATCTCGCGCTAC
GCCATCGTGGACAACGCCGCCTACCGGGTGCTGCGTCGCAAGGTGCCCGGGCCGTTCACGTTCATCCTGCCGGCCACCCG
GCTCGTCCCGGAGCTGGTGCTGCGGCGGCAGAAGACGGTCGGCATCCGCATCCCCGACAGCCCCATCGCGCTCGAGCTGG
TGCGCCGGCTCGGCCACCCGCTCATCTCCACGTCAGCGGCGAAGCCGGAGGGCGAGATCCTCATCGACGCGCACGACATC
AAGGACGAGCTGGGCCACGGGCTCGACCTCATCCTGGACGGCGGGTTCCGCCCGGCCGAGCCGTCGTCGGTCATCGACCT
CTCCGGCCCGGAGCCGGTGGTGGTCCGCGCCGGCAAGGGCGACGTCTCCGACCTGCTCGCCTGA

Upstream 100 bases:

>100_bases
CGCCGCGGACGCCCGCCCGGTGTGCCGGGAGGGCGCCCGCGGTGCGCGCCTCCGCCGCGGCGCTTGGGGAGCCGGCGGAA
AGCTGCTAGATCGCGGGCTC

Downstream 100 bases:

>100_bases
GCGGCGCGCCGGCCGCGAACTGGACGGGCGCGGGCCCGGCGCTATCGTCGCCGCGATGTCCGCGCTGGAGCCCGCCCTCG
ACCTGTTCCTCGCCCACGTG

Product: Sua5/YciO/YrdC/YwlC family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 206

Protein sequence:

>207_residues
MPAAPIVEIDPLHPQPRVVERAVSALSSGGVIAYPTDTFYGIGCDLFDKRAIERIYQLKQLPRTHELAFICQDLAEISRY
AIVDNAAYRVLRRKVPGPFTFILPATRLVPELVLRRQKTVGIRIPDSPIALELVRRLGHPLISTSAAKPEGEILIDAHDI
KDELGHGLDLILDGGFRPAEPSSVIDLSGPEPVVVRAGKGDVSDLLA

Sequences:

>Translated_207_residues
MPAAPIVEIDPLHPQPRVVERAVSALSSGGVIAYPTDTFYGIGCDLFDKRAIERIYQLKQLPRTHELAFICQDLAEISRY
AIVDNAAYRVLRRKVPGPFTFILPATRLVPELVLRRQKTVGIRIPDSPIALELVRRLGHPLISTSAAKPEGEILIDAHDI
KDELGHGLDLILDGGFRPAEPSSVIDLSGPEPVVVRAGKGDVSDLLA
>Mature_206_residues
PAAPIVEIDPLHPQPRVVERAVSALSSGGVIAYPTDTFYGIGCDLFDKRAIERIYQLKQLPRTHELAFICQDLAEISRYA
IVDNAAYRVLRRKVPGPFTFILPATRLVPELVLRRQKTVGIRIPDSPIALELVRRLGHPLISTSAAKPEGEILIDAHDIK
DELGHGLDLILDGGFRPAEPSSVIDLSGPEPVVVRAGKGDVSDLLA

Specific function: Unknown

COG id: COG0009

COG function: function code J; Putative translation factor (SUA5)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 YrdC-like domain [H]

Homologues:

Organism=Escherichia coli, GI87081864, Length=200, Percent_Identity=45.5, Blast_Score=185, Evalue=2e-48,
Organism=Escherichia coli, GI2367210, Length=135, Percent_Identity=31.1111111111111, Blast_Score=80, Evalue=9e-17,
Organism=Caenorhabditis elegans, GI17537239, Length=189, Percent_Identity=31.2169312169312, Blast_Score=72, Evalue=1e-13,
Organism=Drosophila melanogaster, GI78707274, Length=188, Percent_Identity=28.7234042553192, Blast_Score=65, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017945
- InterPro:   IPR004388
- InterPro:   IPR006070 [H]

Pfam domain/function: PF01300 Sua5_yciO_yrdC [H]

EC number: NA

Molecular weight: Translated: 22592; Mature: 22460

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: PS51163 YRDC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAAPIVEIDPLHPQPRVVERAVSALSSGGVIAYPTDTFYGIGCDLFDKRAIERIYQLKQ
CCCCCEEEECCCCCCHHHHHHHHHHHHCCCEEEECCCCCEECCCCHHHHHHHHHHHHHHH
LPRTHELAFICQDLAEISRYAIVDNAAYRVLRRKVPGPFTFILPATRLVPELVLRRQKTV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHC
GIRIPDSPIALELVRRLGHPLISTSAAKPEGEILIDAHDIKDELGHGLDLILDGGFRPAE
EEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEHHHHHHHHCCCEEEEEECCCCCCC
PSSVIDLSGPEPVVVRAGKGDVSDLLA
CCCEEECCCCCCEEEECCCCCHHHHCC
>Mature Secondary Structure 
PAAPIVEIDPLHPQPRVVERAVSALSSGGVIAYPTDTFYGIGCDLFDKRAIERIYQLKQ
CCCCEEEECCCCCCHHHHHHHHHHHHCCCEEEECCCCCEECCCCHHHHHHHHHHHHHHH
LPRTHELAFICQDLAEISRYAIVDNAAYRVLRRKVPGPFTFILPATRLVPELVLRRQKTV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHC
GIRIPDSPIALELVRRLGHPLISTSAAKPEGEILIDAHDIKDELGHGLDLILDGGFRPAE
EEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEHHHHHHHHCCCEEEEEECCCCCCC
PSSVIDLSGPEPVVVRAGKGDVSDLLA
CCCEEECCCCCCEEEECCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]